Cyclopterus lumpus (lumpfish): 117747830
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Entry
117747830 CDS
T09199
Symbol
chrnb1
Name
(RefSeq) acetylcholine receptor subunit beta
KO
K04812
nicotinic acetylcholine receptor beta-1
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
117747830 (chrnb1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
clum04040
]
117747830 (chrnb1)
Ion channels [BR:
clum04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
117747830 (chrnb1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Motif
Other DBs
NCBI-GeneID:
117747830
NCBI-ProteinID:
XP_034413207
Ensembl:
ENSCLMG00005012312
LinkDB
All DBs
Position
18:8025286..8041820
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AA seq
494 aa
AA seq
DB search
MRSPDLFLLACCVGSLCTLGGASDVEKSLMKTLFTGYNLKVRPAASAAERVVVRVGMVLS
SFVGLNMKNEEMSTTVFMNLEWTDYRLSWKPKEHDGIEVMRFPAGKVWLPDIVLINNNNG
VFDVALHVHVQAYSNGRVTWTPPALYCSSCGVKVEYFPFDWQNCTMQFRSYTYDSTEINV
QYALDSKGNEIKEIQLDEAYTEGGEWHITHRPCRKNMNDDLYEDMTFYLIIERKPLYYVF
NIIVPCILITIIAIFNFYLPPDAGEKMGLSINVLLTLTVFLLLLADKIPETSLGVPIIVN
YIMFTMILVTFSVILSVVVLNLHHRSANTHRMPIWVRKIFIHLLPPYLGMLRPKVETPLS
LEIMPRREKKMVSISKVADEYFIRKPDSSILFPKPNRFHPEGMCTDMRKFIDGPSSYLTL
PDELKSAIEAITYIAQALQSEKDSEALKEDWQYVAMVVDRMFLWIFVVFTTVGTLAIFAD
ASFNHTPTDPFKAP
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgaggagcccggatctgttcctgctggcatgttgcgtgggcagcctatgcacattggga
ggtgcgtctgacgtggagaagtctctgatgaagacgctctttaccggctacaacctgaag
gtgcggccagcagccagcgctgccgagagggtggtggttcgtgtggggatggtcctttcc
tcctttgttggactgaatatgaaaaatgaagaaatgagcaccactgttttcatgaacctg
gaatggacagattatcggttgtcatggaaacccaaggagcatgatgggattgaggtgatg
cgttttcccgctgggaaggtttggctgcctgacatagtcctcataaataataacaacggg
gtgttcgacgtagcgctgcacgtccacgtccaggcgtatagtaacggcagagtgacctgg
acgccccctgcgctctactgcagctcctgtggagttaaggtggaatacttcccgttcgac
tggcagaactgcaccatgcagttccgctcctacacgtacgactccacggagatcaacgtg
cagtacgcgctggactcgaaaggcaacgagatcaaggagatccagctggacgaagcctac
accgaggggggcgagtggcacatcacgcacaggccgtgcaggaagaacatgaacgatgac
ctgtacgaggacatgaccttctacctcatcatagagaggaagcccctgtactacgtcttc
aacatcatcgtcccctgcatcctcatcaccatcatcgccatcttcaacttctacctgcct
cccgacgcaggagagaagatgggtctgtcgatcaacgtgttgctcaccctcactgtgttc
ctgctgctgctggcggataagatcccggagacgtccctgggggtcccgatcatcgtcaac
tacatcatgttcaccatgatcctggtcacattctctgtcatcctcagcgtggttgtccta
aacctgcaccaccgctcagccaacacccaccggatgcccatctgggtccgcaagatcttc
atccacctgctgcctccttacctgggcatgctgaggccaaaggtagagacccccctctcc
ctggagatcatgccccgtcgagagaagaagatggtcagcatcagcaaggtggcagatgaa
tacttcatccgcaagcccgactcctccatcttgttccccaagcccaacaggtttcatccg
gagggtatgtgcacggatatgaggaagttcatcgacggccccagcagctacctcacgctg
cctgacgagctcaagtcggccatagaggccatcacatatatcgctcaggctctgcagtcc
gagaaggactccgaggcgctgaaagaggactggcagtatgtggccatggtggtggaccgc
atgttcctctggatcttcgtcgtcttcaccactgtgggcaccttggccatctttgctgat
gctagcttcaaccacacccccaccgaccccttcaaagccccctga
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