Cyclopterus lumpus (lumpfish): 117747861
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Entry
117747861 CDS
T09199
Symbol
sec24d
Name
(RefSeq) protein transport protein Sec24D
KO
K14007
protein transport protein SEC24
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
117747861 (sec24d)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
clum04131
]
117747861 (sec24d)
Membrane trafficking [BR:
clum04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
117747861 (sec24d)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
GDP_Man_Dehyd
Motif
Other DBs
NCBI-GeneID:
117747861
NCBI-ProteinID:
XP_034413250
Ensembl:
ENSCLMG00005006504
UniProt:
A0A8C2Z5Q4
LinkDB
All DBs
Position
18:10606727..10623220
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AA seq
1099 aa
AA seq
DB search
MSQQGYVAAPPYSQAQPGMGGYQGGFGASPAQPLYGHYGGPPQAFAAPPTGMMKPPVPSA
GGMPPPPASNQYNPNVQQNGAHPQRYPAPPANSAYGQPLQSPYNSMASTAPPPAQQLTNQ
MSSMNLGNYAPGPMQSPPPPTSSVIQQPFQTSPPPAMGQPQMPPGPQLPHMSPPQSPLAS
MQMSGPPMSGPPMSGPPMSGHPMSGPPMSGPPMSGHPMSGHPMSGQPMSGPLMSGQPMSG
QPMSGQPMAGPPMSGPPMAGMGRPFPGPPPSGPGGFQQPGLGAAGPPGYPQQAGQFGGHM
AGPQPGMPGAFPGAPGGLAGPPQKKLDPDSIPSITQVIEDDQVKRGGQVYSTNIRGQVPP
LVTTDFTVQDQGNASPRFMRCTTYSLPSTADLAKQCQVPLAAIIKPFANLPKNETPLYVV
NHGETGPIRCNRCKAYMCPYMQFIDGGRRYQCGFCNCVNEVPVFFFQHLDHMGRRADFYE
RPELSLGSYEFVATLDYCKNNKLPNPPAYIFMIDVSYNNIKSGLVKLICDELKTLLENLP
SEEGTESSAINVGFVTYNKVLHFYNVKSALAQPQMMVVSDTAEMFVPLLDGFLVNYQESK
AVIYNLLDQIPDMFAETNESETVFVPVIQAGVEAFKAAECSGKLFIFQSSMPTAEAPGKL
KNRDDKKLVNTEKEKTLFQPQKGVYEQLSKECVAQGCCVDLFLFPSQYMDIATMADVPSH
TGGSVYKYNNFQVETDGEHFLRDLRKDVQKSIGFDAIMRVRTSTGFRATEFFGAVHMNNT
TDVEMAAVDCDKAMTVEFKHDDALSEETGALMQCALLYTTVNGQRRLRVHNLSLNCSSQL
SELYKSCETDSLINFFAKSACRAILNQPLKNVREILVNQTAHMLACYRKNCASPSAASQL
ILPDAMKVFPVYMNSLMKTAPLVGSTELSTDDRAHQRLLLMGMGVEDTQLLLYPRLTPLH
NVDVNVEAQPAPVRCSEERLTDSGMFLLENGHSMFLWLGQASPPELIQSIFNLPSLAHLQ
GHMCALPELDNPLSNKVRSFIDGLIEKRPNSMKLNIVRQKDKPEMLFRQFLVEDKGLHGG
ASYMDFLCYVHREIRQLLT
NT seq
3300 nt
NT seq
+upstream
nt +downstream
nt
atgagtcaacagggttatgttgccgcacccccatactcccaggcccagccagggatgggg
ggctaccaaggtggatttggagctagtcctgcacagcccctctatgggcactatggggga
ccacctcaggcattcgccgctccaccaacaggtatgatgaaaccaccagttccctctgct
ggcggtatgcctccacctccagcgtccaatcagtacaatccaaatgtccagcagaatggc
gcacatccacaaaggtaccctgctccaccagccaattcagcttatggacaacctctacag
tccccatacaacagcatggcttctacggccccgcctccagcacagcagctcaccaatcag
atgagttccatgaacttgggcaactacgccccaggtcccatgcagagcccaccacctcca
acgagctctgtaatccagcagcctttccagacttcccctccaccagcaatgggccagccg
cagatgcctccaggcccgcagttaccccacatgtctccaccacagtcacccctagcaagc
atgcagatgtccggccccccgatgtccggccccccgatgtccggccccccgatgtccggc
catccgatgtccggccccccgatgtccggccccccgatgtccggccatccgatgtctggc
catccgatgtctggccaaccgatgtccggccccctgatgtccggccaaccgatgtccggc
caaccgatgtccggccaaccgatggcgggccctccgatgtccggccctccaatggcaggc
atgggtagacccttccccgggccacctccttcaggccccggaggtttccagcagcctggt
ctcggagctgctggtccaccaggatacccacagcaagcaggtcagtttgggggacacatg
gctggaccccagccaggcatgccaggggccttccctggcgcaccaggcggactggctgga
ccacctcagaagaaactggaccctgactctatccccagcataactcaagtcattgaggat
gatcaagtaaagcgagggggacaggtctacagcacaaacatcagaggacaggttccacct
ctggtcaccactgacttcacagtacaggaccaaggcaatgccagtcccagatttatgcgc
tgcactacctactccttacccagcaccgccgatctggccaaacagtgccaagtgcccctg
gctgccatcataaaaccctttgccaatttgccaaagaatgagactcctctgtatgttgtg
aaccatggtgagacgggcccaatccgctgcaatcggtgcaaggcctacatgtgcccctac
atgcagtttattgatggggggcgtcgctaccagtgtggtttctgcaactgtgtcaatgaa
gtgccagttttctttttccaacatcttgaccacatgggccggagggcggacttttatgag
aggcctgagctgtccctgggatcctacgagtttgtagccaccctggactactgcaagaac
aacaagcttccaaatccccctgcctacatctttatgatcgatgtgtcctataacaacatt
aaaagtggactggtcaaactgatatgtgatgagctgaagactctactggagaatctgccc
agtgaggaaggtacggagagctctgccattaatgttggcttcgtcacctacaacaaggtc
ctccacttctacaacgtgaagagcgctttggcccagccccagatgatggtggtttcagac
accgccgagatgtttgtcccgctgctcgacggcttcctcgtcaactatcaggagtcgaag
gccgttatctacaacctcctggaccaaatccctgatatgtttgcagagaccaacgagagt
gaaacggtctttgttcctgtcatccaggccggcgtggaggccttcaaggcagcagaatgt
agcggaaagctcttcatcttccagtcctccatgccaactgctgaggctcctggcaaactg
aagaacagggacgacaaaaagctggtcaacacggagaaggagaaaaccctgttccagcct
cagaaaggagtgtatgagcagctgtctaaggagtgtgtggcacagggctgctgtgtggat
ctcttcctctttcctagccagtacatggacattgctaccatggctgatgtgccctcgcac
accggaggctccgtctacaagtacaacaacttccaggtggagactgacggggagcatttc
ctgagagacctcaggaaagacgtgcagaagagcatcggctttgacgccatcatgcgtgtt
cgtaccagtacaggtttcagagccaccgagttctttggtgccgtccacatgaacaacacc
acagatgtagagatggcagctgtggattgcgacaaggcgatgaccgtagagttcaagcat
gacgacgcgctcagtgaggagactggggcactcatgcagtgtgctttgctgtacaccacc
gtcaatggacagcgacgtctccgcgtccacaacctcagtttgaactgcagctcacagttg
tcggagttgtacaagagctgcgagaccgactcactcatcaacttctttgccaaatcagct
tgccgtgccatattgaaccagcctctgaagaatgtgagggagatcctggtcaaccagacg
gcccacatgctggcctgctacaggaagaactgtgccagcccctcagctgccagccagctg
atcctgcctgatgccatgaaggtgtttccggtctacatgaacagcctcatgaaaactgct
cccttggtcggcagcacagagctctcaacagacgaccgagcccatcaaaggctgttgtta
atgggcatgggggtggaggacactcagctgctgctctacccacgtctcaccccactgcac
aacgtggacgtcaacgtcgaggctcagcctgctccggtgcgctgctcggaggagcgtctg
acagactctggcatgttcctgctggagaacggccactccatgtttctgtggctgggccaa
gcgagccccccagagctcatccagagcatcttcaacctgccctccctcgcccacctgcag
ggtcacatgtgtgcgctgccagagctggacaatccattatcaaacaaggtccgatccttc
atcgatggcctgattgaaaagaggccgaattctatgaagctcaacatcgtgaggcagaaa
gacaaaccagagatgttgttccgtcagttcctggtggaggataaaggtctgcacggcgga
gcttcctacatggacttcctttgctacgttcaccgagaaatcaggcagctgctcacctaa
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