Cyclopterus lumpus (lumpfish): 117747975
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Entry
117747975 CDS
T09199
Symbol
nedd4a
Name
(RefSeq) E3 ubiquitin-protein ligase NEDD4a
KO
K10591
E3 ubiquitin-protein ligase NEDD4 [EC:
2.3.2.26
]
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04120
Ubiquitin mediated proteolysis
clum04144
Endocytosis
clum04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
117747975 (nedd4a)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
117747975 (nedd4a)
09144 Cellular community - eukaryotes
04530 Tight junction
117747975 (nedd4a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
clum04131
]
117747975 (nedd4a)
04121 Ubiquitin system [BR:
clum04121
]
117747975 (nedd4a)
03029 Mitochondrial biogenesis [BR:
clum03029
]
117747975 (nedd4a)
Enzymes [BR:
clum01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
117747975 (nedd4a)
Membrane trafficking [BR:
clum04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
117747975 (nedd4a)
Ubiquitin system [BR:
clum04121
]
Ubiquitin ligases (E3)
HECT type E3
117747975 (nedd4a)
Mitochondrial biogenesis [BR:
clum03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Morphogenesis factors
117747975 (nedd4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
C2
Motif
Other DBs
NCBI-GeneID:
117747975
NCBI-ProteinID:
XP_034413425
Ensembl:
ENSCLMG00005022293
LinkDB
All DBs
Position
3:15461375..15484018
Genome browser
AA seq
934 aa
AA seq
DB search
MAALSPQIRGLQIDEEESRLLKVKVVAGIGLAKKDILGASDPYARLSLYDPINGEITSLQ
TKTLKKTLDPKWNEEFFFKVDPRKHRLLLEVFDENRLTRDDFLGQVDVPLNQIPTENPNT
ERPYTFKDFLLHPRSHKSRVKGHLRLKMTYLPKNPGSEEETAEQAENIDPGWEFLESQDM
SGPRQSQLLPALPPGWEERQDNLGRTFFVNHESRTTQWTRPTTQEGDVNVQRRPDNNMDA
EQAFTTRRRQISDPDENPARESPESWEIITEDESTLFHSNNQLASPPPHGPAEFQPFHDD
LRNTHFSGVTAGALRASHMSHASNSSHSSRRGSAPTSTGEEHPVNPVHIPTSAVLPSGWE
EKRDSKGRRYFVNHNSRCTSWTRPLIQKTTEAPAVAAPAPPAPPPPAAAAAAAAAAAAQS
GAGVPQSQTPPLPPMSHGDSPSQHTQSTEATHDSGSLPAGWEVRSAPSGRPFFINHNTKT
TTWEDPRHPKIPVHMRKRPSLDPSDLGPLPPGWEERIHTDGRIFYIDHNTKNTQWDDPRL
QNSAITGPAVPYSRDYKQKYDYFRKKLKKPADIPNRFELKLRRNAVLEDSYRRILSVKRA
DLLKARLWVEFEGEKGLDYGGVAREWFFLMSKEMFNPYYGLFEYSATDNYTLQINPNSGL
CNEDHLSYFKFIGRVAGMAVYHGKLLDAFFIRPFYKMMLQKPITLQDMESVDNEYFNSLK
WILENDPTDLDLRFTIDEELFGQTHQHELKPGGSEIVITNDTKKEYIHLVMQWRFVNRIQ
KQMTAFKEGFFELIPQDVIKIFDENELELLMCGLGDVDVNDWRENTKYKNSYCSNHAVIQ
WFWKTVLLMDAEKRIRLLQFVTGTSRVPMNGFAELYGSNGPQLFTIEQWGTREKLPRAHT
CFNRLDLPPYESFEELREKLHIAIENAQGFDGVD
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atggctgcactttccccacagatccgaggacttcagatagatgaggaagagtccagactc
ctaaaagtgaaagtcgttgctggaattgggctggccaaaaaagacatactcggagccagt
gatccatacgcaagactgtccctctatgaccctatcaatggagaaatcacaagtcttcag
actaaaacattaaaaaagacactggacccgaaatggaatgaagaattctttttcaaagtt
gatccccggaagcatcgtctgctcttggaggtgtttgatgagaaccgcctgacacgtgat
gactttctgggacaggtggacgtccccttaaatcagataccgacagaaaatcctaataca
gaaaggccatacacattcaaggattttctgcttcacccacgaagccacaagtccagagtc
aaaggtcacctgcgtctcaaaatgacgtacctgccaaaaaaccccggctcagaagaggaa
acggcagaacaggctgaaaacatagatcctggatgggagtttctggagtctcaggacatg
tcaggtcccagacaaagccagctgctgcctgctctgccccctggctgggaggagcggcag
gacaacctgggaagaaccttctttgtcaatcatgagagcagaaccacacagtggacacga
cccacaacccaggaaggtgatgtgaacgtgcaaagaagaccggacaataatatggatgcg
gagcaagcttttactacacgcagaagacagatctcagacccagatgagaaccctgcacga
gagtctcctgagagctgggagatcattacggaggacgagtccaccttgttccacagcaat
aaccagctcgcatcacctccaccacatgggcctgcagagttccagccgttccacgacgac
ctgagaaacactcacttttctggggtcacagctggcgcgctgcgcgcctcccacatgagt
catgctagtaattcaagtcattccagtcgcagaggaagtgccccaacttcaacgggagaa
gaacatcctgttaaccctgtgcatattccaacctcagcggtgctgccttcaggatgggag
gagaagcgagacagtaaaggaagacgctactttgtcaaccacaacagtcgatgtacttca
tggacacgacccctcattcagaaaaccacagaggcaccagcagtagcggcaccagcacca
ccagcaccaccaccaccagcagcagcagcagcagcagcagcagcagcagcagcacagagt
ggtgcaggtgtaccccagagccagactccacccttaccacccatgtcccacggggactct
ccctctcagcacacccaaagcacagaggccacacatgattctggctccctgccggctggt
tgggaggttcgcagtgctcccagtggaagaccctttttcattaaccacaatactaagacg
actacctgggaagatcccaggcatcccaaaattcctgttcacatgaggaagagaccctca
ctcgacccatctgatctcggccctctgccgcctggctgggaagagaggatccacaccgat
gggaggatattctacatagaccacaacaccaagaacacacaatgggatgatcccagactg
cagaactcagctataaccggaccagcagtgccttattccagagattataaacagaagtat
gactacttccggaagaagctgaagaagccggcggacatcccaaaccgctttgagctgaag
ctgaggcgaaatgcggtgctggaggactcataccgacgcatcctgtcagtgaagcgggca
gacctgctgaaagcaaggctgtgggtggagtttgaaggagaaaaaggactggactatggc
ggtgtggccagggagtggttcttcctcatgtccaaggagatgttcaacccgtactacgga
ctgtttgagtattctgccacagacaactacacactgcagattaacccaaattcaggttta
tgtaacgaggaccacctgtcctacttcaagttcatcggtcgcgtggcgggcatggccgtg
tatcatggcaaactgctggatgcttttttcattcggcctttctacaagatgatgctgcag
aagccgatcactctccaggacatggagtctgttgacaatgaatatttcaactccttgaag
tggattttggagaacgacccgacagacttggatttgaggttcaccatcgatgaagagctg
tttggacagacccaccagcatgaactgaagccaggcggttcagagattgtcatcactaat
gacaccaagaaggaatacatccatctggtgatgcagtggaggtttgtgaacaggatacag
aagcagatgactgccttcaaagagggattctttgagttgataccacaagatgtgatcaag
atctttgatgagaatgagctcgagctgctcatgtgtggtcttggagatgtagatgtgaat
gactggagagagaacaccaagtacaagaacagctactgctccaaccacgcggttatccag
tggttttggaaaacggtgctgttgatggatgcagaaaaaagaatcaggctcttgcagttt
gtgacgggaacttcaagggtcccaatgaatggctttgctgaactctacgggtctaacgga
ccacagctgttcaccatcgagcagtggggaacacgtgaaaaactcccccgagcccacaca
tgcttcaatcgactggacctgcctccttatgagtcctttgaggagctgagggagaaactt
cacatcgccattgagaatgcacaaggctttgacggggtggattaa
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