Cyclopterus lumpus (lumpfish): 117748005
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Entry
117748005 CDS
T09199
Symbol
taf6l
Name
(RefSeq) LOW QUALITY PROTEIN: TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
117748005 (taf6l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
clum03021
]
117748005 (taf6l)
03036 Chromosome and associated proteins [BR:
clum03036
]
117748005 (taf6l)
Transcription machinery [BR:
clum03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
117748005 (taf6l)
Coactivators
SAGA/TFTC/STAGA complex
117748005 (taf6l)
Chromosome and associated proteins [BR:
clum03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
117748005 (taf6l)
STAGA complex
117748005 (taf6l)
TFTC complex
117748005 (taf6l)
SAGA complex
117748005 (taf6l)
SLIK complex
117748005 (taf6l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF6_C
TAF
Motif
Other DBs
NCBI-GeneID:
117748005
NCBI-ProteinID:
XP_034413474
Ensembl:
ENSCLMG00005020678
LinkDB
All DBs
Position
18:complement(14795540..14801645)
Genome browser
AA seq
643 aa
AA seq
DB search
MADRDERRFAEVSRESVKLMAESAGAELGDDVAALLAEDVCYRLREATQSSSQFMRHAKR
RKLTVEDFNRALRWSNVEAVCGYGAQDALPFRPAKEGELFFIEDRDINLVELALATNIPK
GCAETMVRVNVSYLDGKGNLEPQGTVPSAVQSLSDDLLKYYQQITRAILGEDPHLMKVAL
LDLQSNSKIAALLPYFVYVISGVKSVSHDLEQLNRLLHMVKSLVQNPYLYLGSYVRSLVS
SVMYCILEPLAASINPLNDHWTLRDYAALLLSHIFWTHGDLVSGLYHQILLSLQKVLSDP
VRPLCSHYGAVXGLHALGWKAVERVLFPHLPAYWANLQAVLDDYSVSNAQVKADGHKVYG
AILVAVERLLKMKALSQPADGGSSGQPGSAVGVVGYRVSSPGLSPPPEPLSEAALGIASH
LQAGGAGCPWEEWTPVPLPAMYCELYSFFGDSLAVRFSTGPGFGSYPPCPPSQLGDARKE
PCGPASNPDTARKMPQLTANLNISPRQDGSPRTDPPPPSLASTGPGRSLARSSSSSSSSS
SVQRSKSSLSRSGQRPAGPSRDVFPKARFTSPQTGLPVFSFLIGGRQRGRRCKARPFQTT
FAPTPPVPAVPPRAYAHKLPVIGRVGKPVRRWACSHYSLHLPL
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atggcggaccgggacgagcgccgcttcgccgaggtttcccgggagtccgtcaaactcatg
gcggagagtgcaggcgcggagctgggcgacgacgtggccgcgctgctggccgaggacgtg
tgctaccggctcagggaggccacgcagagcagctctcagttcatgagacatgccaagagg
aggaagctgacggtggaggacttcaacagagctctgcgctggagcaacgtagaggccgta
tgtggctatggggcccaggatgctctcccgttccgcccagcaaaggaaggagagcttttc
tttatcgaggaccgggacatcaacctggtggagttggctctggccaccaacatccccaag
ggctgtgctgagaccatggtgcgagtaaacgtgtcttacctggatgggaaaggcaacctg
gagccccaggggacagttccctcagcagtgcagtctctgtcggacgacctgttgaagtac
taccagcagataacccgggccatcctgggtgaggacccccacctcatgaaggtggctctg
ctggacctccagtccaactccaagatcgctgcccttctgccatactttgtttatgtcatc
agcggggtgaagtcagtcagccacgacctggagcagctcaacaggctcctccacatggtg
aagagcctggtccagaacccctacctgtacctgggctcgtatgtgcgcagcctcgtctcc
agtgtcatgtactgcatcctggagccgctggccgcctccatcaacccgctcaacgaccac
tggaccctgcgggactacgcagccctgctcctcagccacatcttctggactcacggggat
ctggtgagcggtctctaccaccagatcctgctgtcgctccagaaggtcctgtccgacccg
gtgagaccactctgctctcactatggagccgtgngtgggctccacgctctggggtggaag
gctgtagagagagtgctgtttcctcacctccctgcctactgggccaacctccaggccgtg
ttggacgactactccgtgtccaacgcccaggtcaaagcagacggacacaaggtctacgga
gccatcctggtggcagtggagcgcctgctgaagatgaaggctctgtctcagccagcagac
ggaggctccagcggtcagccgggctctgctgtgggtgttgtgggttacagggtgagctcc
cccggcctcagtcctcccccagagcccctgtcggaggccgccctgggcatcgccagccac
cttcaggctggcggggccggctgtccgtgggaggaatggaccccggtccctctccccgcc
atgtactgtgaactctactccttcttcggggacagcctggcggtccggtttagcacaggg
ccggggttcggcagctaccctccctgccccccgtcacagctcggtgatgccaggaaggaa
ccctgtggccccgcctccaaccccgacaccgcccggaagatgcctcagctgaccgccaac
ctcaatatcagccccaggcaagatgggagtcctcgtacggacccgcccccccccagcctg
gcatctaccggaccaggaagatccctagctcgctcctcttcttcctcatcctcctcctcc
tctgtgcagcgctccaaatcttccttgtcacgttcgggtcagcggccagccggcccgtct
cgcgatgttttccccaaagcccggttcacctcccctcagacgggacttcctgtgttctcc
ttcctcatcggcgggcggcaaaggggtcgccgttgcaaggcgcggcccttccagaccacg
ttcgccccgactccacccgttcctgccgtcccgccacgggcctacgcccacaagctgcct
gtgatcggcagggtgggcaaacccgtgcgccgctgggcgtgctcccattactcccttcac
ctgcctctctag
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integrated database retrieval system
