Cyclopterus lumpus (lumpfish): 117748008
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Entry
117748008 CDS
T09199
Symbol
ajuba
Name
(RefSeq) LIM domain-containing protein ajuba isoform X1
KO
K16682
LIM domain-containing protein
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
117748008 (ajuba)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
clum03019
]
117748008 (ajuba)
03036 Chromosome and associated proteins [BR:
clum03036
]
117748008 (ajuba)
Messenger RNA biogenesis [BR:
clum03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
117748008 (ajuba)
Chromosome and associated proteins [BR:
clum03036
]
Eukaryotic type
Sister chromatid separation proteins
Aurora kinases
Regulators of Aurora kinases
117748008 (ajuba)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LIM
Motif
Other DBs
NCBI-GeneID:
117748008
NCBI-ProteinID:
XP_034413477
Ensembl:
ENSCLMG00005007040
UniProt:
A0A8C2X5F7
LinkDB
All DBs
Position
18
Genome browser
AA seq
733 aa
AA seq
DB search
MDRPISKLLGKLKLTDSGSVKFNSSKKKHDSASNSNNSNANTGISGGGGGGSGLPLAPSS
AASPSKPGPFSLPSATTSDACVPASGRGGGGGGGGGGGGGGGGGMGMPPSQLVTPPPSSS
SVGAIPQDGEQPLHPSTLAPLRRRSPQQRASCYLGEGVDFHLRRESGLGPECDPQGAFGS
KASLNQRRYSLELQQLVRRQQLLSQPPPLSVPPPYPASTGYGSAPRGGLAEPGYLSEHER
HKRLSLQEALFYKRLSTGSELWEITRPASLSHPPHRTSDVTGGGVGGFFYPPGPTLSPCS
SFSLQESVLVSPRSSFASSTASGGGGSPMGSRCSSNRTSGISLGYDSRYSASGGLPPQQQ
CPSMQTGGSVSGYGASGRAGVTPVEAWTQYLEGGMRPGAQDSRHSYPPAVGSPGAACYQA
GPEWWVEQQAGVRGKDGVVMGDRTRYSDLPGTRYQEELTRLLLRDAALAGGGLLEGLILK
DQSLAITALSKPSTITLGACLAGGPVKPQEDPAVGAGREGVENRQEFFGTCVKCGKGVYG
ADNACQAQDSLYHTRCFTCVSCGRTLRNKDFYNVSGSVYCKEDYMFSGFQAAAEKCSVCG
HLILEQILQALGNSYHPGCFRCVVCSKALDGVPFTVDHHSNVYCVADYNKTFAPKCAACL
QPILPTEGSEEILRVVSMNKDYHFECYHCEECGKQLSDKPGSQCFPLDSHLLCHSCHMSR
ACPTHNIPPHNTH
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atggacaggccgataagcaagttactggggaagttaaagctaacggactcgggcagtgtg
aaattcaacagttcaaagaaaaaacatgactccgccagcaactccaataacagcaacgcc
aacactggcatctccggaggcggcggtgggggcagcggtctgccactggctcccagctct
gcagcctcaccctcaaagcccggcccgttctcgcttccctctgcaaccacaagcgatgca
tgtgttccagcgagtgggagaggaggaggaggaggaggaggaggaggaggaggaggagga
ggaggaggggggatgggaatgcctccatctcagctcgtcaccccaccgccgtcttcctcc
tcggtgggtgccataccccaagatggcgagcaaccacttcacccttccaccttggcaccg
ctgaggcgtcgctccccccagcagcgagcttcctgttacctcggcgaaggcgtggatttc
cacctgaggcgcgagtccggcctgggcccagagtgtgacccccagggagcgtttggctcc
aaggcgtccctcaatcagcggcgctactccttggagctccagcagctggtcaggcgacag
cagctcctctctcagccgccgccgctctctgttccccccccgtaccctgcctccacgggc
tatgggtcagctcctagaggtggcctggcagagccaggctacctctctgagcacgagagg
cacaaacgcctctctctgcaggaggcgctgttctacaaacgcctgagcacgggcagtgaa
ctgtgggagatcaccaggcccgcgtccctctctcatccaccgcatcgcacatcggatgtg
actggaggaggcgtaggaggcttcttttatcccccgggacctaccctgagcccatgctcg
tcattcagcctccaggagtcggtgctggtcagccccaggtccagcttcgcctccagcacg
gccagcggcggcggagggagccccatggggagccgctgcagcagcaaccggaccagtggc
atcagcctgggctatgactctcgctactcggcctctggaggcctccccccacagcagcag
tgcccctccatgcagacggggggctctgtgtctggttatggagcttcaggcagggctggg
gtgacccctgtggaggcctggactcagtacttggagggagggatgcgtccgggggcacaa
gatagccgacactcttacccacctgctgttggaagtccgggggcggcgtgctaccaggct
ggcccagagtggtgggtggagcagcaggcgggagtgagaggcaaagacggggtcgtgatg
ggagacaggaccaggtattcggacctgccgggcacccgctaccaggaagagctcacccga
cttctactgagagatgctgcgctggcaggtggggggctcctggagggcctgattctgaaa
gatcagtctctggccatcacggctctctccaagccgagcacaataacactgggggcttgc
ttagctggagggccggtcaaacctcaggaggatccagcagtcggagctgggagggagggc
gtggagaaccggcaggagttctttggaacctgtgtaaagtgtgggaaaggcgtgtacggg
gcggataacgcctgccaggctcaggacagcctctatcacacgcgctgcttcacctgcgtg
tcctgtggacgcacgctgagaaacaaggacttctacaatgtcagcggctctgtgtactgt
aaagaggattacatgttttcaggattccaggctgccgctgagaagtgtagtgtgtgtggc
caccttatcctcgaacagatcctgcaggctctggggaactcgtaccatcccggctgtttc
cgctgcgtggtctgctccaaggctctggatggggtgccgttcaccgtggaccaccacagc
aacgtctactgcgtggcggactacaacaagactttcgccccgaagtgcgccgcctgttta
cagcccatcttaccgaccgagggcagcgaagagatcctcagggtcgtgtctatgaacaag
gactatcactttgagtgctaccactgcgaggagtgtggtaagcagctctccgataagccc
ggctcgcagtgcttccctctggactctcatctcctctgccactcctgtcacatgagcaga
gcgtgccccacacacaacattccccctcacaacacacactga
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