Cyclopterus lumpus (lumpfish): 117748032
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Entry
117748032 CDS
T09199
Symbol
trip6
Name
(RefSeq) thyroid receptor-interacting protein 6 isoform X1
KO
K12792
thyroid receptor-interacting protein 6
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
117748032 (trip6)
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Gene cluster
GFIT
Motif
Pfam:
LIM
DUF7576
zf-dskA_traR
Motif
Other DBs
NCBI-GeneID:
117748032
NCBI-ProteinID:
XP_034413528
Ensembl:
ENSCLMG00005012957
UniProt:
A0A8C2ZFG1
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Position
18:8266417..8274372
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AA seq
576 aa
AA seq
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MSGPTWLPPRSLDSPEQAAPPQMSHSAGSAIYRAPNKKGTPDFRPKYGPYDQNGGGGGGG
GGGSGGMANRYMATGPTGGPIHHSSSDHYYSPPHGPKEDRNWSPHLDSYELMHRGPEKPA
SYHSKIDADIDSLTSMLADLDSHPQDTQLYDNVPYNKYLPGDHYKPAHQSAGPPQGRPSM
GYPPHPQSQYHPAPRYPSEHQSPQYPTSHQPDYYSSSSTPKPYPQPVPASYTTASTPTGP
RFSVQVKTAQPVTYSQTGRQAEQAYTPPPPRQHVSRPPPQTSPQGWYPPHPSSQAQEMHS
EVVYKGSSSGPGGRVVQVPQSKRGMENHQTGPGAAQSPAYQSSQQGIATTRPEEELDRLT
KKLVYDMNHPPVEDYFGRCARCGDNVVGDGSGCIAMEQVFHVECFTCITCHARLRGQPFY
ALDKKSYCESCYISTLERCSKCSKPILDRILRAMGKAYHPRCFTCVVCNCCLDGVPFTVD
ATSQIHCIDDFHRKYAPRCSVCGEPIMPEQGQEETVRIVALDRSFHVNCYICEECGLLLS
SEGEGRGCYPLDGHILCKSCSACRIQDLSAKISTDC
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atgtccggtcccacctggctcccaccgaggtctctggatagccccgagcaagccgccccc
ccacagatgtctcactctgctgggtcagcaatctacagagcccccaacaagaaggggacg
cctgactttcggccaaaatatggcccctatgaccagaacggaggaggaggaggaggagga
ggaggtggtagtggtgggatggccaacaggtacatggctactggacccacaggtgggccc
attcatcattcgtctagcgatcactactactccccgccccatgggcccaaggaagaccgc
aactggagccctcacctggacagttacgagctgatgcaccgcggtccggaaaagccagcg
agctatcactctaaaatcgacgctgatattgactccctcaccagtatgctcgctgacctg
gacagccacccgcaggacacgcagctatacgacaatgtgccttacaacaagtacctcccg
ggggatcactacaagcccgcgcaccagagtgcaggccctcctcagggtcggccatccatg
ggctacccccctcatccccagagccaataccacccagctccccgctaccccagcgagcac
cagtcccctcagtaccccacctcccaccagccggactactactcctcctcttcaacccca
aagccctacccccagcccgtcccggcctcctacaccactgcctcaactcctactgggccc
aggttcagcgtccaggtcaagacggctcagccggtcacctactctcagacggggaggcag
gctgaacaggcctacacgccgccccctcctcgccagcacgtgtcacggccccctcctcag
acgagtccgcagggctggtaccctccacaccccagctcgcaagctcaggagatgcactct
gaggtggtgtacaaggggagcagctcaggacctggaggaagagttgtccaggtcccacag
tccaagagagggatggagaatcatcaaaccgggccaggggctgcgcagagtcctgcttat
cagtccagccagcagggtatagcaacaacaaggccagaggaagagttggatcgacttacc
aagaagctggtatacgatatgaaccacccccctgtcgaggactattttggccgctgtgcc
cggtgcggggacaacgtggtcggtgacggcagtggctgcatcgccatggagcaggtgttt
cacgtggagtgtttcacatgcatcacctgccacgcccgtctccgggggcaacccttctac
gccctcgacaagaagagttactgtgagagttgttacattagtacattagagcgctgttca
aagtgctccaagcccatcctggaccgtatcctgcgggccatgggaaaggcctaccaccct
cgctgtttcacatgtgtggtttgcaactgctgcttggacggggtgcccttcaccgtggac
gcaacctctcagatacactgcatcgatgactttcataggaagtacgctcctcgctgctcc
gtttgcggtgagcccatcatgcccgaacagggtcaggaggagaccgtgaggatcgtagct
ctggaccgcagcttccatgttaactgttacatctgtgaggaatgtggtctcctgctgtcc
tctgaaggcgagggtcgaggctgttacccgctggacggccacatcttgtgtaagagctgc
agcgcatgccgcatccaggacctctcagccaaaatctccacagactgctaa
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