Cyclopterus lumpus (lumpfish): 117748042
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Entry
117748042 CDS
T09199
Name
(RefSeq) transcription factor Sox-19a-like
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
clum03000
]
117748042
Transcription factors [BR:
clum03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
117748042
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
SOXp
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
117748042
NCBI-ProteinID:
XP_034413540
Ensembl:
ENSCLMG00005020513
UniProt:
A0A8C3ANK1
LinkDB
All DBs
Position
18:complement(12647800..12652684)
Genome browser
AA seq
306 aa
AA seq
DB search
MYSMMEHELKPTGQPPSHQTSQGMSPVTGNMTGGMGGNGNSHPGSKTACAPGVDPMDKVK
RPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLTDAEKRPFIDEAKRLRAVHM
KEYPDYKYKPRRKTKPMLKKDTQVGKYPLSAGSLLAAAQGQGGSPRMDSYGWGPTGGYAG
MQSEALGYSQQLHRYDLSALQYPPAMSAAQTYMNGGNSYSPMSYSSSPQQPSPVTMSMVK
AEPVSHSPPTGTPNHHRGPLQGDLRDMISMYIPGPGGDAGDPTAAQRGYTSVQQHYLSGT
VPLTHI
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgtacagcatgatggaacacgagctgaagccgaccggccagcccccgtctcaccagacc
tcccagggaatgtcaccggtcaccggcaacatgaccgggggcatgggcggcaatggcaac
tctcacccgggctccaaaacggcatgcgcgccgggagtcgaccccatggataaagtcaag
cggcccatgaacgccttcatggtctggtccaggggacagaggcgcaagatggcccaagaa
aaccccaaaatgcacaactctgagatcagcaagcggctgggcgccgagtggaagctgctg
accgacgccgagaagcggcctttcatcgacgaggccaagcggctgcgggcggtccacatg
aaggagtaccccgactacaagtacaagccacgccgcaagaccaagcccatgctcaagaag
gacacccaggtgggcaagtacccgctgtcggcagggagcctgctggcggcggcgcagggc
caaggtgggagcccgaggatggacagctacggctggggccccaccgggggctacgccggc
atgcagagcgaggccctcggctactcgcagcagctccaccggtacgacctgtcggctctg
cagtacccgcccgcgatgtcggcggcgcagacttacatgaacggaggcaactcgtacagc
cccatgtcctacagcagcagcccgcagcagcccagccccgtcaccatgtccatggtgaaa
gcagaaccggtgtctcactcgcccccaacagggacgcccaaccaccaccgcggccctttg
cagggcgacctcagggacatgatcagcatgtacatccctggaccagggggggatgccggt
gaccccacggcagcacagaggggctacaccagcgtccagcagcactacctctctggaacc
gtcccactcacacacatctag
DBGET
integrated database retrieval system
