Cyclopterus lumpus (lumpfish): 117748080
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Entry
117748080 CDS
T09199
Name
(RefSeq) F-box only protein 41-like
KO
K10316
F-box protein 41
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
clum04121
]
117748080
Ubiquitin system [BR:
clum04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
117748080
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_FBX41
F-box-like
Motif
Other DBs
NCBI-GeneID:
117748080
NCBI-ProteinID:
XP_034413594
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All DBs
Position
18:939089..958319
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AA seq
948 aa
AA seq
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MSSSSASSSSSSSSSSSSALPYFCPRCGDAFRFPSVPELRAHLVSQHTYETLLVLSQTRV
RSSRSTAVLQAPPGPSVPNRQSSSLGMEAPVLAYLDLASSEASVQLLGKMFVPSDRALIP
KGRPQDPYTALALFGFPGSLEAGLQPGLPGSLEAGLQPGLPGSLDAGLQPGLPGSLESGL
QPGLPGSLEAGLQPGLPGSLESGLQPGLPRSLESGLQPGLPRSLESGLRPGLPGLQPGLP
GLQPGLPGSLEPGLRPGLPGLRPGLPGLQPGLPGLQPGLPGSLEPGLQPGLPWLDRKIAL
TFAEVEERVNRKVRRLKAELQRREAELDWERHGWERLKSEKQEVEERAAHLSRQVSVAVE
MTERLKRDLEGKDLELSERQQEMVDLECFLRETADREATAKSRLQVFIESLLERADRAER
QLLLLSLHTHHRHHQREGYAPAPGRGGRSLDGSTHDVIADKMQETIGNRRSYSVSGEQPY
SQHSSSLRGRMRTWSLGSGEGDLLLYAPPWTRLWVEDGGCGRTWSKRNRRQYSTEEEEEE
EEEEEEEEEEGLWSSAEMRRLVFSRKHTPGSGELFSVSCSKHFPFASFTIKARIVSPPFA
EAPSSLRSTLSRRHGDRQLGVDTLRLRAGLLCVFPYLDVRSLLLAAEVCSDWRFVARHPA
VWTRLRLEDARVSAEFLTTLSQWCTQTQSVVLINLKPRSRRADESREDYHKNTRGSVEPG
VEALLRSAGGSLLHLSVSQCPHILTDRTLWLASCYSRSLQILTYRSSSDPLGHEVLWALG
SGCRTISSLQVAPAHPCQQPTRFGNRCLQNIGRCWPRLQALSVGGAGCGTQGLAALVHTC
AHLQVLELERITDLGLQVATELCEAGLKSLQTLVLTHSAVSGQAVLHFHSMCRNIRSITV
EVAGSDYFEEPDSQEARRLFGEILNTLQVLQKRPGLCDVLQVKAEGLC
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcctcctccgcctcctcctcctcctcctcctcctcctcctcttcctcggcgctg
ccctatttctgccctcgctgcggcgacgccttccgcttcccgtctgtacctgagctccgt
gctcacctggtgagccaacacacctacgagaccctgctggtgctgtcgcagactcgggtc
aggagctccaggtctaccgctgtcctccaggcgccccccggcccatccgtacccaacaga
cagagctcctctctgggcatggaagcccctgtcttggcctacctggatctggcctcgtcg
gaggcctccgtgcagctgctcgggaagatgtttgtcccgtcagatcgagccctgatccct
aagggacgcccgcaggacccctataccgctctggccctcttcggcttccccgggtccttg
gaggccgggctccagccgggcctccccgggtccttggaggccgggctccagccgggtctc
cccgggtccttagatgccgggctccagccgggcctccccgggtccttggagtccgggctc
cagccgggcctccccgggtccttggaggccgggctccagccgggtctccccgggtccttg
gagtccgggctccagccgggcctccccaggtccttggagtccgggctccagccgggcctc
cccaggtccttggagtccgggctccggccgggtctccccgggctccagccgggtctcccc
gggctccagccgggcctccccgggtccttggagcccgggctccggccgggtctccccggg
ctccggccgggcctccccgggctccagccgggtctccccgggctccagccgggcctcccc
gggtccttggagcccgggctccagccgggcctcccctggctggatcgcaaaatcgccctg
acgttcgcggaggtagaggagagggtgaaccgcaaggtgcgtcgactgaaggcggagcta
cagaggagggaggcggagctagactgggagaggcacggctgggagcggctgaagagcgag
aaacaggaagtggaggagagggcggcgcacctgtccagacaggtctctgttgccgtggag
atgacggagcggctgaagagagacctggaaggaaaagacctcgagctgagtgaacgacaa
caggagatggtggacctcgagtgcttcctcagagagacggccgacagggaggccacggcc
aagtccagactccaggtgttcattgagtcgttgttggagcgagccgaccgcgcagagaga
cagttgctgctgctcagcttgcacacacatcatcgtcatcatcagcgcgaagggtacgca
cctgcacccggccggggggggcggagcctggacggcagcacccatgacgtcatcgccgac
aagatgcaggaaaccatcggcaaccggaggagttacagtgtctccggggagcagccgtac
agccagcattcctccagtctgaggggtcgcatgaggacctggtctctgggctctggggaa
ggggacctcctcctgtacgctcctccctggacccgattgtgggtcgaggatggaggttgt
gggagaacgtggagcaaaagaaaccgtcggcaatacagcactgaagaagaggaggaggag
gaagaggaggaagaggaggaggaggaggaggggttgtggagcagcgctgagatgaggaga
ctggtcttctccaggaagcacacacctggttcaggtgaactgttctctgtctcctgttcc
aaacacttcccgtttgcctctttcacaataaaagcccggattgtctcccccccctttgca
gaagccccctcttccctccgctcgacactgtcccgtcgccacggcgacaggcaattgggg
gtggacaccctgaggctgagggcggggcttctctgcgtatttccttatttggacgtgcgc
tccctgctgctcgccgccgaggtgtgctctgattggcggttcgtcgccaggcacccggcg
gtttggacacgcctccgtctggaggacgccagagtgtcggccgagttcctcaccactctg
tctcagtggtgcactcagactcagtctgtggttctgatcaacctgaagcctcgaagcaga
cgagccgacgagtcgcgtgaagattatcacaagaacacacggggcagtgtggagccgggg
gtggaggccctgctgcgctcagcagggggcagtctgctccacctgtctgtctctcagtgt
cctcacatcctcactgacaggacgctgtggctcgccagctgctacagcaggagcctccag
atactcacatacaggagttcgtcagaccctctgggtcacgaggttctctgggccctgggt
tcaggctgcaggaccatcagcagcctgcaggtggcgccggctcacccctgccaacaaccc
actcgctttggaaaccgctgcctgcagaacattggtcgatgctggccacgcctccaggct
ctcagtgtgggcggggccggctgtgggactcagggattggctgctttggtacacacctgt
gctcacctgcaggtgctggagttggagcgcatcaccgacctcggcctgcaggtggcgacc
gagctgtgtgaggccggactgaagagcctgcagactctggtcctgacgcactcggccgtc
agcggtcaggccgtgctgcacttccacagtatgtgtcgcaacatcagatccataaccgtg
gaagtcgcggggtcggactactttgaggagccggactctcaggaggcccgacgtctgttt
ggagaaatcctcaacacgctgcaggttcttcagaaacgtcctggactctgtgacgtcctg
caggttaaagctgaaggactctgctga
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