Cyclopterus lumpus (lumpfish): 117748106
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Entry
117748106 CDS
T09199
Symbol
dysf
Name
(RefSeq) dysferlin
KO
K18261
dysferlin
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
clum04131
]
117748106 (dysf)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
clum04147
]
117748106 (dysf)
Membrane trafficking [BR:
clum04131
]
Endosome - Lysosome transport
Others
Ferlins
117748106 (dysf)
Exosome [BR:
clum04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
117748106 (dysf)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
Ferlin_C
FerB
FerA
FerI
Pex24p
CEP76-C2
PTEN_C2
Motif
Other DBs
NCBI-GeneID:
117748106
NCBI-ProteinID:
XP_034413622
Ensembl:
ENSCLMG00005018835
LinkDB
All DBs
Position
18:2773425..2841839
Genome browser
AA seq
2105 aa
AA seq
DB search
MLRCVLQRANNLRHSDPLAGVTFRGCKKKTKVIKNNSNPVWNEGFEWDLKGIPLDSGAQL
HCVVKDHEKMGRNRFLGETRLALRDVLNSPNLAATFTVSLLDTKRNITGATLTLQVSYIP
PPGSAAVFQPPPHPEAPSHNNNNPNVELDTVTMISMDTLDEEDTESMIMLEPTEDQGPDD
GRSVVTTGPQGPSGHESPTAQTPKRSPPSYNVHGGLRKRRRGASSQPRPLPNKPQDLQVR
VRVIEGRQLPGINIQPVVKVTVAGQSKRTRIRKGNSPFFDETFSLNFFETPSDLFDEPIF
ITVCDSRSLRNDAVIGEFKLDVGTVYNEHRHCFLRKWLLLCDPDDLSAGVKGYLKVSLLV
LAAGDEPPADKRECVEDKEDIEGNLLRPAGLSLRGATFTLRIFRAEDLPQMDDAFVDGMR
QIFGFDSNRKNLVDPLVEIHFAGKTVCTKILEKNANPQWNQSLAMPIRFPSMCEKMRIRI
LDWDRASHNDVIGTTHLCMSKISAPGGQIDVDDSLGFLPTFGPCFVNLYGSAREFTAFHD
PHEALNLGKGEGVAYRGRVLLELTTKLADKPEQKSEDIPSDDLLVVEKFLRKRKFSLFVA
FYSATLLQDVDDAVQFEVSIGNYGNKFDYTCLPLASATQFSRAVFDGCHYYYLPWGNVKP
VVVLSSEWEDIKPRIEALNMLLAIIERLEANLQRVQLDVKAGGDLEEVELRVVELLDQVI
TDCSEELPSIDQWQCATPLDRSLRHVRDLHLQQVVAAAQALKHGPATELSTVLEQAEDWA
GRLRAVAEEPQNSLPDIVIWMLQGDRRVAYHRVPAHTVIFSQQHRGKHCGQLQTVFLKNP
QGGAGEAKLPGQLRVKVWFGLAADVKHFNQYAEGKLSVFAETYENQTRLALVGSWGTAGL
TSPKFSDVTGRVKLPKESFKPSPGWTWAGDWCISPEKTLLFDVDAGHMTFSEEVFENQMR
LPGGQWIGMPEGYTDVNGEKAVPKDEVECPPGWVWEEVEWSEDLNRAVDDQGWEYGIPIP
PDRRPKSWVPAEKMYHTNRRRRWIRMRRRDQQKMEALRKQRPDEAEREGWEYASLFGWRF
HLKPRKTDSFRRRRWRYRMEPLEKTGPAAIFALECSLVRGIEDKNEDKSITTTFGVNRPT
ISCFFDRGTRYHLRCYLYQARDLLAMDKDSFSDPYAIVSFLHQSQKTVTVRNALNPTWDQ
TLIFYEVEIFGDLEATIAAPPNVVVELYDQDTYGADEFMGRCVCRPSLTASPHLAWFPVR
RGDQNAGELLAAFELIRREKPSVHHIPGQEGDIMTSTHVLDELMFPGFLSENLQQWPEES
DLPHPPPQREPNVFVVPQGIKPVLQRTAIEVLAWGVRNLKSFQLASITSPSLQVECGGVT
LQSCVIRSVKKKPNFDVNTLVLDVRLPREELYMPPIVIKVIDNRQFGRKPVVGQCSIRSL
EEYRCTPEEEEEERAAEEEEEEEGWRRETPHMTSGEVFIDIDDQEPLVADQGEEVMDWWS
KFYASTGEKNKYGTYLERGFDTLQVYGRELEKVEGFEGLSDFCQTFKLQRGKTQEEGEDP
SVVGEFKGMFKIYTLPDDPSDPAPPRQFRKLPPNGIEDCLVRVYVIQAQGLQPKDANGKC
DPYVKIVLGKKTLNDHENYIPCTLDPVFGKMFELTCSLPLEKDLRVMLYDHDMLTKDEKI
GETTIDLENRFLSRYGAMCGLPLSYCVSGVNRWRDQMTPRQLLYRVCERRSLRKPVYHDD
VVHFRGARYTAADLDDKSVSKRHLGPLKERLSLLILRKLGLVPEHVETRPLYSPLQPDIE
QGRLTMWVDLFPKSLGPPGAPFNVTPRKAKKFFLRCVVWNTSDVLLDDVSLSGEKMSDIY
VKSWLDGHEHTKQKTDVHYRSLGGEGNFNFRFLFPFHYLPAEQLCVLDRKEHFWSLDKAE
TKLAPKLTVQIWDNDKFSFDDYLGHLVMDLNRMLRPAKSPEKCDLQLLEQPAERLVSLFQ
QKTVRGWWPCTCEQSGEKIIAGKVEMSLEIVTEQEHEERPAGPGRDEPNMNPHLEEPQRP
ETSFLWFSSPFKTLRFILWRRFKWFIILFIILFFLFLFLSVFLYSFPNYAAMRMVGPFGP
AKAAE
NT seq
6318 nt
NT seq
+upstream
nt +downstream
nt
atgttgcgttgcgttctccagcgagccaacaacctgaggcactcggaccccctggccggg
gtcacgttcagagggtgtaagaagaagacgaaggtcatcaagaacaactccaaccccgtt
tggaacgagggtttcgaatgggacctgaaggggatccctctggactccggggcgcagctg
cactgcgtggtcaaagaccacgagaagatggggaggaacaggttcctgggggaaaccagg
ttggctctcagagacgttctcaactctcccaacctggccgccaccttcaccgtgtccctg
ctggacaccaagaggaacatcacaggggccacgctgaccctgcaggtttcctacatccct
cctccaggatcggctgcagtgtttcagcctcctccccatcccgaagctccatcccacaac
aacaacaaccccaacgtggagctggacaccgtcacaatgatttctatggacacgttggac
gaggaggatacggagagcatgatcatgctggagccgacagaggaccaggggcccgacgac
gggcgctccgtggtcaccacgggcccccaggggccctcgggccacgagtcccccacggcc
cagaccccgaagcgctcgccgccgtcctacaacgtccacggagggctgaggaagaggagg
aggggagccagcagtcagccaaggccgctgcccaacaaacctcaggacttacaggttcgc
gtgcgggtcatcgagggccgacagttgccgggcatcaacatccagcctgtcgtcaaggta
acggtcgccgggcagagcaagaggacccgcatcaggaagggcaacagccccttctttgac
gagacgttctccctgaacttcttcgagacgccatcggacttgttcgacgaacccatcttc
atcaccgtgtgtgactcccgctcgctcagaaacgatgctgtgatcggtgaattcaagttg
gatgtgggcaccgtctacaacgagcaccgacactgcttcttgaggaaatggctgctgctg
tgtgaccccgacgacctctctgccggggtcaaaggttacctgaaggtcagcctgttggtg
ttggcggctggagatgagccgccggccgacaaacgcgagtgtgtggaagacaaagaagac
atcgaaggaaaccttctgagaccggctggtctgtctctgagaggagccacgttcaccctg
aggatcttcagagccgaagacctgccgcagatggacgacgccttcgtggacggcatgagg
cagatcttcgggttcgacagcaacaggaagaacctggtggatcctctggtggagatccac
tttgccggcaaaaccgtgtgcactaagatcctggagaagaacgccaacccacagtggaac
cagagcctggcgatgccgatcaggttcccctccatgtgtgagaagatgaggatcagaatt
ctggactgggacagagccagtcacaatgacgtcatcggcaccacccacctctgcatgtcc
aagatctccgcccccggtggacagatagacgttgacgacagtctcggcttcctgccgacc
ttcggcccctgctttgtcaacctgtacggcagcgcccgcgagttcaccgccttccacgac
ccacacgaagccctcaacctcggaaaaggagagggcgtggcctaccgaggtcgagtttta
ctggagctcaccacgaagctggcggacaagccggagcagaaatctgaagacatcccatca
gacgacctgctggtggtggagaagttcctcaggaagaggaagttctctctcttcgtggcg
ttctactcggcgacgctgctccaggacgtcgacgacgccgtccagttcgaggtcagcatc
ggtaactacggcaacaagttcgactacacttgcctccccctggcctccgccacccagttc
agcagggccgtgttcgacggctgccactactactacctcccctgggggaacgttaaaccg
gtggtggttctgtcctccgagtgggaagacatcaagccgaggatcgaggctctcaacatg
ctgctggcgatcatcgagaggctggaggccaacctgcagcgggtgcagctggacgtgaag
gcgggcggtgatctggaggaggtggagctccgcgtggtggagctgctggatcaggtgatc
acagactgcagtgaagagctgccctccatcgaccaatggcagtgcgcgacccctctggac
cgctcgctgaggcacgtccgagacctccacctgcagcaggtcgtggcggcggcgcaggcc
ctgaagcacggcccggccacggagctgtccacggtgctggagcaggccgaggactgggcc
ggccggctgagggccgtggccgaggagccccagaacagcctcccggacatcgtcatatgg
atgctgcagggcgaccgccgggtggcgtaccaccgcgtcccggcgcacacggtgatcttc
tcccagcagcaccgtgggaaacactgcggacagctgcagaccgtcttcctcaagaaccca
cagggcggcgctggagaggccaagcttcccggtcagctgagggtcaaagtgtggtttgga
ttggccgctgacgtcaaacacttcaaccaatacgctgaagggaagctgtccgtctttgct
gagacgtatgagaaccagacccgactggccctggtgggcagctggggaactgcgggcctg
acctccccaaagttcagcgacgtcactggacgggtcaaactgcccaaagagagcttcaaa
ccctctccgggctggacctgggccggagactggtgcatcagccccgaaaagacactgctg
ttcgacgtggacgccggtcacatgaccttctcagaggaagtgtttgaaaaccagatgagg
ttaccgggcggacagtggatcggcatgccggagggctacaccgacgtgaatggggagaag
gcggtgccgaaggacgaggtggagtgtcccccgggttgggtttgggaggaggtggagtgg
agcgaagacctcaacagggctgtggacgatcaaggctgggagtacggcatccccatccct
ccagaccgccggcccaagtcgtgggtgccggcggagaagatgtaccacaccaaccgcagg
cggcggtggatccggatgagacggcgagaccagcagaagatggaggcgctccgaaaacag
cgtccggacgaggcggagagggagggctgggagtacgcctcgctgttcggctggaggttc
cacctgaagccgaggaagacggacagcttccggaggcgcaggtggaggtaccgcatggag
ccgctggagaagacgggaccggccgccatctttgctctggagtgttctctggtgaggggc
atagaagacaagaacgaagacaagtccatcacgaccacgttcggagtcaacagaccgacc
atttcctgtttctttgaccgaggcacccggtaccacctgcgctgctacctgtaccaagcc
agagacctgctggcgatggacaaagacagcttctcagacccctacgccatcgtgtccttc
ctccaccagtcccagaaaacggtgacggtgcgcaacgccctgaaccccacgtgggaccag
acgctcatcttctacgaggtggagatcttcggcgacctggaggccacgatcgccgctccg
cccaacgtggtggtggagctgtacgaccaggacacatacggtgcggatgagttcatgggc
cgctgtgtgtgccggccctccctgaccgcctccccccacctggcctggttcccggttcgc
agaggggaccagaacgccggcgagctgctggccgccttcgagctcatacgcagagaaaag
ccatctgttcatcatattccaggtcaagagggcgacatcatgacctccacccacgttctg
gacgagttgatgtttccaggattcctctctgagaacctacagcaatggccggaggagtcg
gacctcccccacccgccccctcagagagaacccaacgtcttcgtggttcctcagggaatc
aaaccggttctgcagagaaccgccatcgaggtgttggcgtggggcgttcgcaacctgaag
agcttccagctggccagcatcacctccccgagcctgcaggtggagtgcggcggcgtcacg
ctgcagagctgcgtcatccgcagcgtgaagaagaagcccaactttgacgtcaacacgctc
gtccttgatgtgaggcttccccgcgaggagctctacatgccgccgatcgtcatcaaagtc
atcgacaaccgtcagttcgggaggaagccggtcgtcggccagtgctccatccggtcgctg
gaggagtaccggtgcacgccggaggaggaggaggaggagcgagcggcggaggaggaggaa
gaggaggagggctggaggcgtgagacgccccacatgaccagcggggaggttttcatcgac
atcgatgaccaggagccgctcgtagccgaccagggcgaggaggtcatggactggtggagt
aagttctacgcctcgaccggagagaagaacaagtacgggacgtacctggagagaggcttc
gacacgctgcaggtgtacggccgggagttagagaaggtcgagggtttcgaaggcctctcg
gatttctgtcagacgttcaagctgcaaagaggaaagactcaggaggaaggagaagatccg
tcggtggtgggagagttcaagggcatgttcaagatctacacactgccggacgacccctcc
gaccccgctccccccaggcagttcagaaagcttccccccaatggcatcgaggactgcttg
gtccgggtctacgtcatccaggctcaagggctgcagcccaaagacgccaacgggaagtgt
gacccctacgtgaagatcgttttggggaaaaagaccctcaacgaccatgaaaactacatc
ccctgtacactggaccccgtctttggaaagatgttcgagctcacctgttccctccccctg
gagaaggacctccgggtgatgctctacgaccacgacatgctgaccaaagacgagaagatc
ggagagacgacgatcgacctggagaaccgcttcctgtccagatacggcgccatgtgcggc
ctgccgctgtcctactgcgtctcgggggtcaaccggtggagggaccagatgacgcccaga
cagctgctgtaccgagtgtgtgagaggcggagcctgaggaagcccgtctaccacgacgac
gtggtccacttcagaggagcccggtacaccgccgcagacctggatgataaaagcgtatcc
aaacgtcacctcggtccactgaaggagcggctgtccctcctcatcttgaggaagctgggc
ttggtccccgagcacgtggagacccgacccctctacagcccgctgcagccggacatcgag
caggggcggctgacgatgtgggtggacctgttccccaaatccctgggaccccccggagcc
ccgttcaacgtcacgccgcgcaaggctaagaagttcttcctgcgttgcgtcgtctggaac
accagcgacgtcctcctggacgacgtcagcctcagcggggagaagatgagcgacatctac
gtcaagagctggctggacggtcacgagcacaccaagcagaagaccgacgtgcactaccgc
tctctgggcggagaggggaacttcaacttccgcttcctgttccccttccactacctacct
gccgagcagctgtgcgtcctcgacaggaaggaacatttctggagtctggataaagccgag
accaaactggctcctaaactcaccgtccagatctgggacaacgacaagttctccttcgac
gactacctgggtcacctggtgatggacctgaaccgcatgctgcgcccggccaagtccccg
gagaagtgtgacctgcagctgctggagcagccggcggagcgcctggtgtctctgttccag
cagaagacggtccgaggctggtggccctgcacctgtgagcagagcggagagaagatcatc
gcggggaaggtggagatgtctctggagatcgtgacggagcaggagcacgaggagagaccg
gccgggcccggtagagacgaacccaacatgaacccccacctggaggagcctcagcgtcca
gagacctccttcctgtggttctcctccccctttaagaccctgaggttcatcctgtggagg
cggttcaagtggttcatcatcctcttcatcatcctcttcttcctgttcctcttcctcagt
gtcttcctctactccttcccgaactacgcggccatgaggatggtgggacctttcgggcca
gcaaaggcagcagagtga
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integrated database retrieval system
