Cyclopterus lumpus (lumpfish): 117748107
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Entry
117748107 CDS
T09199
Symbol
eprs1
Name
(RefSeq) bifunctional glutamate/proline--tRNA ligase isoform X1
KO
K14163
bifunctional glutamyl/prolyl-tRNA synthetase [EC:
6.1.1.17
6.1.1.15
]
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum00860
Porphyrin metabolism
clum00970
Aminoacyl-tRNA biosynthesis
clum01100
Metabolic pathways
clum01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
117748107 (eprs1)
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
117748107 (eprs1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
clum01007
]
117748107 (eprs1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
clum03016
]
117748107 (eprs1)
Enzymes [BR:
clum01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.15 proline---tRNA ligase
117748107 (eprs1)
6.1.1.17 glutamate---tRNA ligase
117748107 (eprs1)
Amino acid related enzymes [BR:
clum01007
]
Aminoacyl-tRNA synthetase
Class I (A)
117748107 (eprs1)
Transfer RNA biogenesis [BR:
clum03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
117748107 (eprs1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WHEP-TRS
tRNA-synt_1c
HGTP_anticodon
tRNA-synt_2b
ProRS-C_1
tRNA-synt_1c_C
tRNA-synt_1c_C2
GST_C
Arc1p_N_like
GST_C_3
Motif
Other DBs
NCBI-GeneID:
117748107
NCBI-ProteinID:
XP_034413627
Ensembl:
ENSCLMG00005017232
LinkDB
All DBs
Position
3:complement(6968942..6991117)
Genome browser
AA seq
1898 aa
AA seq
DB search
MALNLTINTSNPPLGALLTAEHVKGSVQVSVEEGKDTQLHVSDAIQFNDANSISRYLARV
APALGLYGANMMEQTEVDHWLEFSAQRLCGQPALSNALVDLDKALSLRTFLVGHTLTLAD
LSVWAALKGHGEWPSQGKSFSHVNRWFSFLSSQVPFTAVGNKYASKKAPLSKSNLDEKKQ
DVGKFVDLPGAEMGKVVVRFPPEASGYLHIGHAKAALLNQHYQITFKGKLIMRFDDTNPE
KEKEDFEKVILEDVAMLQIHPDQFTYTSDHFITIMGFGEQLLAEGKAYIDNTPPEQMKLE
REQRAESKCRNNTVEQNMKMWSEMKAGTKSGQTCCMRAKIDMNSNNGCLRDPTLYRCKTT
PHPRTGSTYNVYPTYDFACPIVDSLEDVTHSLRTTEYHDRDEQFYWIIDALRLRKPYIWE
YARLNLNNTVLSKRKLTWFVDQGYVDGWDDPRFPTVRGVLRRGMTVEGLKQFIAAQGGSR
SVVNMEWDKIWAFNKKVIDPVAPRYTALSSSYVVPVSISEATEEMKEVAKHPKNAEVGMK
KVWYGPRVLVEGADAETFAEGEMVTFINWGNLIITKINKGADSKVVSMEARLNLDNKDFK
KTTKITWLADTNSAPLLPTICINYLPLISKAVITKDDDFKEYINKNSKLEEKMLGDPCLQ
SLKKGDIIQLQRRGFFICDQPYEAVSPNSCKESPCVLLYIPDGHTKEMPTAGSKDKSKSQ
ASSKTPASTSAKAASTPAPAPVPAATSASDMFSSIVAQGEAVRQLKVAKAPKDEVDKAVQ
QLLSLKVQFKQQTGMDYKPGMAPPTSAPAPPTTSTDSCPFTQVTQQGELVRKLKAEKAPK
DQIDLAVKQLLALKAAFKKLTGQDYKPGMAPSAPASSSAPAPAASSSSSSSCSSSGLYER
VSQQGENVRKLKSEKAPKDQVDAAVKQLLALKAEYKQVTGQDYKPGAAPVQKVQAPVQKV
QAPVQKVQAPVQNSPSSAPAATGLYEKVSEQGEVVRKLKVEKASKDQVDAAVKQLLALKA
EYKQQTGQDYKPGAAPVQKAQAPVQKAQDPVQNSPSSAPAATGLYEKVSEQGEVVRKLKV
EKASKDQVDAAVKQLLALKAEYKQQTGQDYKPGAAPVQNSPSSAPAATGLYEKVSEQGEV
VRKLKVEKASKDQVDAAVKQLLALKAEYKQQTGQDYKPGAAPVQNAQAPVQKAQAPVQKA
QDPVQNSPSSAPAATGLYEKVSEQGEVVRKLKVEKASKDQVDAAVKQLLALKAEYKQQTG
QDYKPGLQAPGSQAQTQSSSPPQAEELFSQVTQQGERVRKLKSEKAPKDQVDEAVKTLLD
LKSKYKTLTGQDYKPVAAAGATGGEDKNRKERENKSEKQGGGGPGGGKKGKGDKANQGKE
ASGGAGGPGEGQGPKKQTRLGLEAKKEENLADWYSQVITKAEMIEYYDVSGCYVLRPWAF
SIWEAIQDFFNREIKKMGVENCYFPMFVSQAALEKEKSHIEDFAPEVAWVTRSGKTELAE
PIAVRPTSETAMYPAYAKWVQSHRDLPIKLNQWCNVVRWEFKHPQPFLRTREFLWQEGHS
AFATKEEAAEEVLQILDLYARVYEELMAIPVVKGRKTEKEKFAGGDYTTTVEAFISASGR
AIQGATSHHLGQNFAKMFEIMFEDPKKPGEKQLVFQNSWGITTRTIGVLTMVHGDNMGLV
LPPRVACLQVVVIPCGITASLPEQEKEAVLTQCSKYMKRLLDAGVRVKTDLRDNYSPGWK
FNHWELKGVPIRLEVGPKDMQQRQCVAVRRDSGAKVTIPEAEVEKRLVALLEDIQNSLFN
KASDDLKRNMVSADTIEQFQSELDQNKIVQIPFCGGIECEDWIKKITAKDQDLEPGAPSM
GAKSLCIPFSPLKTLQPGQMCVSGKEPAQYYTLFGRSY
NT seq
5697 nt
NT seq
+upstream
nt +downstream
nt
atggcgttaaacctcaccattaacacaagcaatccgccgctcggagcgcttctgacagca
gagcatgtgaagggcagtgtgcaggtgtcagtggaggaaggcaaagacacccagcttcac
gtctcagatgcgatccagttcaacgatgccaactctatcagtcggtacttggcccgtgtg
gctcccgctcttggcctctacggagccaacatgatggagcagactgaggtcgaccactgg
ttggagttcagtgctcagcggctctgtggtcagcctgctttaagcaacgcgctggtggat
ttggataaggccctttccctgcggaccttcttggttggacataccctcaccctggctgac
ctgtccgtctgggctgctctgaaaggtcatggggaatggccaagccagggcaagtccttc
tcccacgtcaatcgctggttctctttcctgagctcacaggttcccttcaccgctgtggga
aacaagtatgccagtaagaaagctccattgagcaaatccaacttggatgagaagaagcaa
gatgttggcaagtttgtggatttgccaggagccgagatgggcaaggtggtggttcgattc
cctcccgaggccagtggatacctgcacatcggccatgccaaggccgctctgctcaaccag
cactaccagatcacgttcaaaggcaagctcataatgcgcttcgacgacaccaaccctgag
aaggaaaaggaggactttgagaaggtgatcttggaagatgttgccatgctccagatccac
ccagaccagttcacctacaccagtgaccattttatcaccataatgggatttggggaacag
ctactcgctgagggcaaagcctacattgacaacacgccgcctgagcagatgaaactagag
cgggagcagcgcgccgagtccaaatgcagaaataacacggtggagcagaacatgaagatg
tggtcggagatgaaagctgggacaaagagcggtcagacctgctgcatgcgggccaagatc
gacatgaactccaacaacggatgcctgagagaccccaccctctaccgctgcaagaccact
cctcaccctcgcaccggaagcacctacaacgtctacccaacatatgactttgcctgtccc
atcgtggacagtttggaggatgtgacccattcccttaggaccactgagtaccacgatcgt
gacgagcagttctactggataatcgacgcactgcgcctcaggaagccttacatctgggag
tacgcccgactcaacctcaacaacacggtgctgtccaagaggaagctcacctggtttgtc
gaccagggatacgtcgatggctgggatgaccctcgcttccccactgtcagaggagtccta
aggagaggaatgaccgttgagggtctgaagcagttcatagcagcccagggtggatcacgg
tcagtggtgaacatggagtgggacaagatctgggccttcaataagaaggtcattgacccg
gtagctcccaggtacacagctctgtccagctcctatgtggttcctgtctccatctcagaa
gctacagaggagatgaaggaggtggccaaacaccctaagaacgcggaagtgggcatgaag
aaggtttggtacggacctcgagttctggttgaaggagccgatgctgagaccttcgcagag
ggggagatggtcaccttcatcaactggggcaacctcatcatcaccaagatcaacaagggg
gccgactctaaggtcgtctcgatggaggctcgcctgaacctggacaacaaggacttcaag
aagacgacgaagataacgtggctggccgacaccaacagtgctcccctgctgcccaccatc
tgcataaactacctgcctctcatctccaaggccgtcatcaccaaagacgacgacttcaag
gagtacatcaataaaaacagcaagctggaggagaagatgctcggcgacccttgtctgcag
agcctgaagaaaggtgacatcatccagctacagaggcggggcttcttcatctgtgaccag
ccttacgaggccgtcagtcctaacagctgtaaggagagtccctgtgtgctgctctacatt
cccgatggacacaccaaggagatgccgactgctggatccaaggacaagagcaagagccag
gcctccagcaaaacacctgcttcgacctctgccaaagctgcctcgacccctgcccctgcc
cctgtgcctgccgcaacctcagctagtgacatgttctcgagcattgtagcacaaggtgaa
gctgtccgtcaactaaaggttgccaaggctcctaaagacgaagtggacaaggcagttcag
cagctgctgtctctaaaggtgcagtttaagcagcagacgggtatggactacaaaccgggc
atggcccctcccacttctgctccagccccgcccaccacatcaacagactcttgtccgttc
acccaagttacccagcagggcgagctggtcaggaagctgaaggccgagaaggcgcctaag
gaccagattgacctcgcagtgaagcagctcctcgctctgaaggcggcgtttaaaaagctg
actggtcaggattacaaacctgggatggccccctctgctcctgcctcctcctccgctcca
gctcctgcagcctcctcctcctcctcttcttcctgctcttcttctggcctgtatgagcgt
gtttcacaacaaggggagaatgtgaggaaactgaagtctgaaaaagcccccaaggaccag
gttgacgcagcagtgaagcagctgcttgccctgaaggccgagtacaaacaggtcacaggc
caggactacaagcctggagcggccccagtccagaaggtccaggctccagtccagaaggtc
caggctccagtccagaaggtccaggcccctgtccagaacagtcctagctctgcacctgct
gccaccggcctgtatgagaaggtctctgagcagggagaagtggtccggaaactgaaggtc
gaaaaggcctccaaggatcaggtggacgctgcagtgaagcagctgttggctttgaaggcc
gagtacaaacagcagaccggacaggattacaaacctggagcggccccagtccagaaagcc
caggctccagtccagaaagcccaggaccctgtccagaacagtcctagctctgcacctgct
gccaccggcctgtatgagaaggtctctgagcagggagaagtggtccggaaactgaaggtc
gaaaaggcctccaaggatcaggtggacgctgcagtgaagcagctgttggctctgaaggcc
gagtacaaacagcagaccggacaggattacaagcctggagcagccccagtccagaacagt
cctagctctgcacctgctgccaccggcctgtatgagaaggtctctgagcagggagaagtg
gtccggaaactgaaggtcgaaaaggcctccaaggatcaggtggacgctgcagtgaagcag
ctgcttgctctgaaggccgagtacaaacagcagaccggacaggattacaaacctggagcg
gccccagtccagaatgcccaggccccagtccagaaagcccaggctccagtccagaaagcc
caggaccctgtccagaacagtcctagctctgcacctgctgccaccggcctgtatgagaag
gtctctgagcagggggaagtggtccggaaactgaaggtcgaaaaggcctccaaggatcag
gtggacgctgcagtgaagcagctgttggctctgaaggccgagtacaaacagcagaccgga
caggattacaaacctggtttacaagccccaggtagccaggcccagactcagtccagctct
cccccgcaggccgaggaactcttctcccaggtgacccaacagggagagcgagtgagaaag
ttgaaatccgagaaggcccccaaggaccaggtggatgaagccgtgaagactctcctggac
ctgaagagcaagtacaagacgcttactggacaggactacaaaccagtggccgctgctgga
gccactggaggagaggacaaaaaccgcaaggagagggagaacaagtctgagaaacaggga
ggaggaggaccaggaggagggaagaagggtaaaggagacaaagccaaccagggcaaggag
gcttcaggaggagcaggaggcccaggagagggtcaaggacctaagaaacaaacacggttg
ggcttggaggccaagaaagaggagaacctggctgactggtactctcaggtcatcactaaa
gcggagatgattgagtactatgacgttagcggctgctatgtgctgcggccctgggccttc
tccatttgggaggccattcaagacttctttaaccgggagattaagaaaatgggcgtggag
aactgctacttccccatgttcgtctcgcaggctgccctggagaaggagaaatcccacata
gaggattttgccccagaggttgcctgggtaacccgttcaggaaagaccgagctggcggag
cccattgctgtcagacccaccagtgagacagcgatgtaccctgcctacgctaaatgggtc
cagtcccacagagacctgccaatcaaactcaaccagtggtgtaacgtcgtgagatgggag
ttcaaacacccccagcccttcctgaggacgagagagttcctgtggcaggagggacattcg
gcctttgccaccaaagaggaggcagccgaggaggtgcttcagatcctggatctgtacgcc
cgggtgtacgaggagctgatggcgatccccgtggtgaaggggaggaagacggagaaggag
aagtttgccggaggagattacaccaccactgtggaggcattcatctctgccagcggccga
gccattcagggtgctacgtctcaccatctcggtcagaacttcgctaagatgttcgagatc
atgtttgaggatccgaagaagccgggtgagaaacagctggttttccagaactcctgggga
atcacaaccaggaccatcggtgtcctcaccatggtccacggagacaacatgggactcgta
ctgccacccagggtggcctgcctgcaggttgtcgtgatcccatgtgggatcactgcctcc
ctgccggagcaggagaaggaggcggtgttgacccagtgctctaaatacatgaaaaggctg
ctggatgctggcgtcagggtgaagactgacctccgagacaattactccccagggtggaag
ttcaaccactgggagctcaagggagttcctatccgtctggaagtgggtcctaaggatatg
cagcagcgtcagtgcgtcgcggtgcggagagactcgggcgcaaaagtcaccattccggag
gctgaggtggagaagaggctggtcgccctgttggaggacatccagaacagcctgtttaac
aaagcttcggacgacctgaagaggaacatggtgtccgcggacacgatagaacagttccag
agtgagttggaccagaacaagattgtccagatccccttctgtggaggaattgagtgcgag
gattggatcaagaaaatcactgccaaggaccaggacctggagcctggagctccttccatg
ggagccaagagcctctgcatccccttctcacccctgaagacactgcagcccggtcagatg
tgcgtcagcggcaaggagcccgcccagtactacaccctgttcggacgcagctactga
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integrated database retrieval system
