Cyclopterus lumpus (lumpfish): 117748135
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Entry
117748135 CDS
T09199
Name
(RefSeq) NACHT and WD repeat domain-containing protein 2
KO
K24734
NACHT domain- and WD repeat-containing protein
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
clum04990
]
117748135
Domain-containing proteins not elsewhere classified [BR:
clum04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
117748135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
Beta-prop_NWD2_C
WD40_CDC20-Fz
EIF3I
WDR55
WD40_WDHD1_1st
Beta-prop_EML_2
NPHP3_N
Beta-prop_WDR90_POC16_2nd
AAA_16
AAA_22
Beta-prop_RSE1_2nd
Beta-prop_TEP1_2nd
PQQ_2
NACHT
AAA_28
AAA
NPHP3
Beta-prop_WDR19_1st
TniB
AAA_25
Motif
Other DBs
NCBI-GeneID:
117748135
NCBI-ProteinID:
XP_034413658
Ensembl:
ENSCLMG00005019412
LinkDB
All DBs
Position
18:6581965..6619541
Genome browser
AA seq
1744 aa
AA seq
DB search
MKRMNPRWKSPPMWPSGVGSRQPCPRESALRKAAISGNINALPHHVPTGRSVRVFICANP
DDTEAERNALKEHVYPKLRDFCRENYGIEFQVVDLYWGADPEEWDSPELQRLRMKLLEEC
LKTSAGPCFVGLVGEKYGSIRVPGEVESAEFEMILDAAVEAGLDTHILEEWYCRDENSVP
PAYYLKPKAQMLKNYQNSMESSSAAKTKNDKAWRNVSEEIKKIFRTAVLQLQEKGTMKSA
EAKKFLCSALEDELDFALGKQTPAFLKKCVCYIRKISNFDRFAKIPEMTRYMDTVVGSDR
VMRNQESYERLLKVRDEFIPTIVAASNLRVYSSVTHCDMKLGYSQEVESNYVEGLCKQFY
EDMVDIIQATVQQNLGTETDPLYDEILQHLSLCKSYADLYQFKTESLDYVQEYLLPSKGS
RMSPLVVYGGPCTGKTLLLSEVAKQAYTWLQKEMGPETDPVVIVRFIGSSQLSTDLRTLL
QSICEQIAINYRCLIHFLPNKIQEMRELLINLLGESSFHRPLVIVLDALEQLSDADEVRK
LWWLPIHLPRTVRIVVSTLPNKHGILQKLRQLIHDEGYYVELIQRDRKVCSQTLKQQLLE
VKRKVTSGQQIYVNEALAKCTLPMFVNLIYREVVHWRSHKDVDDRSLCSTVHESIEQLFY
SVENKLGQRFVFRALGYITMAKAGLTEVELEDILSLDNIVLGDVIVATYLKNPLRISYDL
VARLKEELGGYLVERQVRNVTLMVWANRHLHLIAQKLYLSNEEDVHQMHSLLAEYFLGAW
AGGRKKIFTYDNNHFTSLNISHHKNPHQQPSQEKTSSDKYSYDRQTPEQPWVFQCNLLEP
DIFFVNHRKMTELVYHLTRSGRTDDLMFGVIMNFSWLYTMIKIGQFEKALTDIDLAYSYT
QEKELKFLATTLRCIKVKVLKNPASLSAELQQRLLPVVTSLPKLRHLLLECDKDGPKYCS
IVPLHSSMDVTYSPERLPLCSSYMQIVEILPTLAPNIVLVALEDGSVSTWDVESRQLQRQ
IDTAKSVVLGIRLTTDEKYLVVATTKNTLLIYDNHKSCLLSEVEIKGSKQGGVAGGVAFI
NGFTLSTHHALAWLEASKDVNVIDLLYGWPLYQFHCWYEVTCVQCSPDGMYAFCGQYLNT
ASIFHLGNGDKLATVTSEFSGGFVKSILVLDTLNQMVMVDNEGSLSVWNTKEITNPRLME
DYDCRGDDSEVVGIELSEDQRSILICKARSIEVLDTKVWKMVEKFKAKRTERFVAAVLSK
NGQSIVASMENTSSIFVWRRDSGQCMASLIEISGAIVKLIKSTHHNLLLSVASSGVLSVW
DIDIITAMSNIDKTGKKIQTLLLSGREDYVFTMDGSEAVHKWNFSTGFIETVFKHEGIVE
NCVLTSSGDLMVTSDDKSSQYIWQTTTGENIFRINGQKISQLLITHNDQFVVSLCEQDAS
RVWRLGTGHKVCNILVTLQNALVTTANTFLVGSSKNKLLAVSLWSGSVSKKFVCDDGITI
VNFKLIPDCPDCVVFITSTETVIIWSVADESVCRRVQLPPNFLKNLEDFQISPNGKVGIV
SKGDENINVLDLHSGKLRLVHAAGIIWRQKLSRDGRYLVYVCFRNCEEDDDAGVVSNLIV
MRLADGKSIGMCSLYKTPTFLCLSQRALNIIIGFEDGSIGTYTVVDRVDAALKIKIATSN
SRQIVNNASQKVRPKCGNHSFKTVADCIWRESTEVFSRDSPINVSDSGEGESTTPTKKTE
LLQS
NT seq
5235 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgaatgaatccacgctggaagtcgccccccatgtggccgtcgggagtggggagc
aggcagccctgcccgcgggagtcggcgctgcgcaaggcggccatcagcggcaacatcaac
gccctgccgcaccacgtccccaccggccgcagcgtccgggtcttcatctgtgccaacccc
gacgacacagaggcggagaggaacgcactgaaagagcacgtctaccccaaactacgagac
ttctgcagggagaactatggaattgaattccaggtggtggacctgtactggggcgcggac
ccagaggagtgggacagtccagagctgcagcgactcaggatgaaactcctggaggaatgt
ctgaagacctccgcgggaccatgttttgttggtctggtgggagaaaagtacggcagcatc
cgagtgccgggggaggtggaatcagcggagtttgagatgatcttggatgcagcagtggag
gcggggctggacacacacatcttggaagagtggtactgcagggatgaaaactctgtgcca
cccgcatactacctcaaacccaaagcccaaatgcttaagaactaccagaactctatggag
tcgagcagcgcagccaagaccaagaacgacaaggcctggaggaacgtgtcggaggagatc
aagaagatcttccgaacagcggtgctgcagcttcaggagaagggcaccatgaagagcgcc
gaggccaagaagttcctttgctctgccttggaggatgaattggactttgccctcgggaaa
caaactcctgcctttctcaagaaatgtgtctgctacattcgcaagatctccaacttcgac
cgcttcgccaaaatccccgagatgacccgatacatggacaccgtggtcggcagcgatcgc
gtcatgcgcaaccaggaatcctacgaacgcctcctgaaggtacgggacgaattcatcccc
acgattgtcgctgcctccaacctccgcgtctattcttcagtcacccactgcgacatgaag
ttaggctactcccaagaagtggagagcaactatgtcgagggtctgtgtaaacagttctac
gaggacatggtggatatcatccaggccacggtgcagcagaacttgggcactgagactgac
ccgttatacgacgaaatcctgcagcacctgtcgctctgcaaaagctacgcagatctctac
cagttcaagaccgagtcgttggattacgtacaagagtatcttctgccctccaaggggagc
agaatgagccctctggtggtgtacgggggaccgtgcactgggaagacgctgctgctatcc
gaggtagccaaacaggcctacacgtggctgcagaaagagatgggccctgaaacggaccca
gtggttattgtccgttttattggctccagccagctctccacagacctacgcactctcctc
cagagcatttgtgaacagattgccataaactaccgctgcctgattcactttttgcctaac
aagatccaggagatgagggagctcctgatcaaccttctaggggaatcttcattccaccgg
cctttggtcattgtcctggatgccctggagcagctctcagatgcggacgaagttcgcaag
ctgtggtggctccccatacacctgcctcggacagtccgcattgtagtctcaacgttaccc
aataaacatggcatcctgcagaagcttcgacagctcatccatgatgaggggtattatgtg
gaattaatccagagggaccgcaaggtctgcagccaaacattaaaacagcagttgctggag
gtgaagagaaaggtcacctcaggccaacagatctatgtcaatgaggcacttgccaagtgt
acattgccaatgtttgtcaacctcatctacagagaagtagttcattggagatctcacaaa
gatgtggacgacaggtccctgtgctccacagtgcacgaaagcatagaacagctattctac
tcagtggagaacaagttgggccagcgatttgtcttccgagcattagggtacatcaccatg
gccaaagctgggctaactgaggttgagctggaagatattctgtcccttgataatatagtt
cttggggatgtaattgtggcaacctacctcaaaaaccccttgaggatctcttatgatttg
gttgcaaggctcaaagaggaactgggtggttatctggtggaacgtcaggtacgtaacgtc
accttgatggtttgggccaacagacacctgcatctcattgcccagaagttgtatcttagc
aacgaggaggacgtccatcaaatgcacagcctcctagcagagtacttcctcggggcatgg
gcaggaggcaggaagaagatcttcacttacgataacaaccatttcacttccctgaatata
tctcatcacaaaaacccccaccaacagccgtcccaggaaaaaacgtcctctgacaagtac
tcctatgacagacagactccagagcagccttgggtgtttcagtgcaatcttttggagcct
gacattttctttgtcaaccataggaagatgacagagctggtgtaccatcttaccaggagt
gggcgcactgatgacctcatgtttggtgttatcatgaacttcagctggctgtacacaatg
atcaagattggccaatttgaaaaggctttaacagacattgacctagcttacagctacacc
caagagaaagaactgaagttcctggccaccactctccgttgcatcaaggtaaaagtgctg
aagaacccagcatcactgtctgcagaactgcagcaaaggcttttgccagttgtcacctcc
cttcccaagctcagacacctcctcctggagtgtgacaaagatggcccgaagtactgctcc
attgtgcctctccactcctctatggatgtcacctacagtccagagaggcttcctctgtgc
tctagctacatgcagattgtggagatcttgcccactctagccccaaacatagtccttgta
gccctagaagatgggtctgtgagcacctgggatgtagagagtagacaacttcaaagacag
atcgacacagccaagtctgttgtgcttggaatcaggctaaccactgatgaaaagtatctg
gtcgtggccacaaccaaaaacacgttgctcatctatgataatcacaagtcctgcctttta
tctgaggtggaaatcaaggggtccaagcaaggtggtgtcgccggtggggtggccttcatc
aacggttttactttgtccacccaccatgctttggcttggcttgaggctagtaaagacgtc
aacgttattgacctactctacggttggcctctctaccagtttcattgctggtatgaggtg
acttgtgtccagtgctctccagatgggatgtacgccttctgtggccagtacctcaacact
gcatccatctttcatctgggaaacggggacaagttggccactgtgacctctgagttttct
gggggatttgtaaagtccattctagttctggacacccttaaccaaatggtgatggttgac
aatgaaggcagtttgtcagtatggaacaccaaagagatcaccaacccacgtctgatggag
gattacgattgtagaggggatgacagtgaagtggtgggcattgagttatctgaagaccag
cgctccattctcatttgcaaggccagaagtattgaggttctggacacaaaagtatggaaa
atggtggagaagttcaaagcaaaacgcactgaacgctttgtggctgctgttctctccaag
aatggacaaagcattgtggcctccatggagaacacctcctccatctttgtttggaggagg
gacagtggacagtgcatggctagcctgattgaaatctcaggggctatcgtcaaactcatt
aaatcaacccaccacaacctgctcctttctgttgccagcagtggcgtgctgtctgtttgg
gacattgatatcatcaccgcaatgtcaaatattgacaaaacaggcaagaagatccagacc
ttgctgctgtccggcagagaggattatgtgtttactatggacggttcagaagctgtccac
aaatggaacttcagcactggctttattgagacagtctttaagcacgagggcatagtggag
aactgtgtcctaacctcctcaggggatctcatggtgacatcagatgacaagtccagtcag
tacatctggcaaaccaccactggagaaaacatctttcgcatcaatggacagaaaatatca
cagctgctaatcacccacaacgaccaatttgtggtgtccctctgcgagcaggacgcatcc
agagtctggaggctcgggactgggcacaaagtctgcaacattttggtcaccctccagaat
gcactggtcaccacagcaaacactttccttgtgggaagctccaaaaacaagctcctcgct
gtcagcctgtggtcaggcagcgtatccaagaagtttgtctgtgatgatggcattaccatt
gtcaacttcaagctcatccctgactgccctgactgtgtggtgttcatcacatccacagag
accgtcatcatctggagtgtggcggatgagtcagtttgcaggcgagtccagctgccaccc
aatttcctcaaaaatctagaggacttccagatttcgcccaatgggaaagtaggaattgtc
tccaaaggtgatgagaatattaatgtcctggatcttcacagcgggaagctgaggcttgtc
cacgctgctggtataatttggcgtcagaaattatcaagagatggacgttatctagtgtat
gtctgtttccggaactgtgaagaagacgatgatgcgggtgtcgtgtccaatctgatcgtg
atgcgccttgctgatggtaagagcatcggcatgtgctccctgtacaagacgcccactttc
ctgtgtctctctcagcgagcactaaacatcatcattggcttcgaggacggcagcattggc
acatacacagtagtggaccgtgtggatgctgccctcaagatcaagatagccacctccaac
agccgacagattgtcaacaatgcctcgcaaaaggtgcggcccaaatgtggcaaccattcc
tttaagaccgttgccgactgcatttggagggagtcaacggaggtcttctccagggacagc
cctatcaacgtgtctgactccggtgagggtgagtcgaccacgccgacgaaaaagactgaa
ttgctgcagtcatag
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integrated database retrieval system
