Cyclopterus lumpus (lumpfish): 117748254
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Entry
117748254 CDS
T09199
Symbol
thap11
Name
(RefSeq) THAP domain-containing protein 11
KO
K23211
THAP domain-containing protein 11
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04980
Cobalamin transport and metabolism
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09150 Organismal Systems
09154 Digestive system
04980 Cobalamin transport and metabolism
117748254 (thap11)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
clum03000
]
117748254 (thap11)
03036 Chromosome and associated proteins [BR:
clum03036
]
117748254 (thap11)
Transcription factors [BR:
clum03000
]
Eukaryotic type
Zinc finger
Cys2CysHis zinc factors
117748254 (thap11)
Chromosome and associated proteins [BR:
clum03036
]
Eukaryotic type
Gene silencing
Transposable elements
117748254 (thap11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
THAP
BBS2_N
Motif
Other DBs
NCBI-GeneID:
117748254
NCBI-ProteinID:
XP_034413752
Ensembl:
ENSCLMG00005022367
LinkDB
All DBs
Position
3:15636746..15641088
Genome browser
AA seq
271 aa
AA seq
DB search
MPGFTCCVPGCYNNSHRDRDLRFYTFPKDTALRELWLRNISRAGVSGCFSTFQPTTGHRV
CSVHFTGGRKTYTIRVPSLFPLRGVNERRSRRGRGRKVSAAVPASAAAATSGIVLSNVLG
STAEGAEGNAGGEASDDGITVVQIGQNGEYLGTARLPAQSEGTCYTVGSADELTADDSSV
ETASAPVQYVSVTSSPLDHSYSLTTGTTSAELLRKLNEQRDIIALMEVKMKEMKASIRQL
RVTEAKLQEEVRERDRLLYGNSVAFSVRKKI
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgcccgggttcacctgctgtgtccctgggtgctacaacaactcgcaccgggaccgggac
ctgcgcttctacacgtttcctaaggacaccgcgctgagggagctgtggctgaggaacatc
tcccgggccggggtcagcggctgcttcagcaccttccaacccaccacgggacaccgagtc
tgcagtgtgcatttcaccggcgggaggaagacctacaccatccgagtcccgtccctcttc
cctctgcgcggggtaaatgaacgcaggagtcggcggggcagaggcaggaaagtgtcggcg
gcggttcctgcctccgccgctgcagcgacctccgggattgtgctcagcaatgtcctgggc
agcacggcggaaggagccgagggcaatgctggcggcgaggcgagcgatgacggcatcacc
gtggtccagataggccagaacggggagtacctgggcacggcgcggctgcccgcccagtca
gaggggacttgttacaccgtcggcagcgccgacgagctgaccgccgacgattcatcggtg
gaaaccgcgtccgcgcccgtgcagtacgtcagtgtgaccagcagcccgctggaccactcg
tactctctgaccaccggcaccacgtcggccgagctgctgcggaaactcaacgagcagcgg
gacatcatcgcactgatggaggtgaagatgaaggagatgaaggcgtccatccgccagctc
cgggtgaccgaggccaagctgcaggaggaggtgcgggaacgggaccggctgctgtacgga
aactcggtggcttttagcgtccgaaagaaaatctga
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