Cyclopterus lumpus (lumpfish): 117748309
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Entry
117748309 CDS
T09199
Symbol
tdrkh
Name
(RefSeq) tudor and KH domain-containing protein isoform X1
KO
K18406
tudor domain-containing protein 2
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
clum03036
]
117748309 (tdrkh)
Chromosome and associated proteins [BR:
clum03036
]
Eukaryotic type
Gene silencing
piRNA pathway
117748309 (tdrkh)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TUDOR
KH_1
KH_Vigilin
KH-I_KHDC4-BBP
KH_PARP14_3
KH_PNO1_2nd
Motif
Other DBs
NCBI-GeneID:
117748309
NCBI-ProteinID:
XP_034413788
Ensembl:
ENSCLMG00005022371
UniProt:
A0A8C3GBM6
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Position
19:2917875..2927433
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AA seq
552 aa
AA seq
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MEGHKSSLNTGKMVALAAGLSVGATVGYIVYRRISSANHPDQEPNTQVSKVTLPVEVYRN
MSRYQATFLDTVAQKSGAHVRILPDPGEPGCRTTVCFLLQGSEEQVLLARCVLQNLVTDS
EPVSEALEVPQIAFGRIIGRGGESLKLITRTTGAKVTCSKEKTHGPGATGNVTITGTRQE
VEQAKELILEKVREDTMVRTKISQSSALRQKRGHTAVHQRPDDAGTEAPAGLNNNNNNGP
YSQTESNGRIHANGTTEHPETIFDKIEELKITNTANDEEEEEEEESVSTDSLSEISKFEI
PSPDLSFQPDEHLEVYVSASENPNHFWIQILGVRSLQLDKLMQEMNRFYNSGNPGEQRVE
TIVVGDIVAAPYHDHGTWNRARVLGVLGSGLVDLYYVDFGDNGELPRDGLCRMRSDFLSL
PFQAIECNLAGVRPKGEVWTEAALDEFEQLTSCACWRPLQAKLCSYSHSDISSWPSVKLY
DNSTVDIGEELVRLGHAVSFQEAVSGRTEGCLQRMLDDVIGASSELSLSCISLSEAASIS
GSVDDVIEDELL
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atggagggtcacaagagctccctaaacacgggcaaaatggtggcccttgctgcggggctc
tccgtcggggccacggtgggctacatcgtctatcgccgcataagcagtgccaaccaccct
gatcaggagcccaacacgcaggtgtccaaggtgacacttccagtagaagtttatcggaac
atgtccagataccaagccacgtttctggacacggtggcccagaagtccggagctcatgtg
aggattttgccagatcccggggagcccggctgtaggacgactgtctgcttcctgctgcag
ggctctgaggagcaggtcttgctggcccgctgcgtcctgcagaacctggtcacggacagc
gagccagtcagcgaggctttggaagttcctcagatcgccttcggacgaataataggccgc
ggcggagagagtttgaaactgatcaccaggaccacgggggccaaagtaacttgttccaaa
gagaagacgcacggccccggggccacgggcaacgtgacaatcacagggaccagacaggaa
gtggaacaggccaaggagctgattctagaaaaggtcagggaggacacgatggtgaggaca
aagatctcgcagtcgtctgccctgcgccagaagcgcggccacaccgccgtacatcagagg
ccagacgacgcagggacggaggccccagcgggattgaacaacaacaacaacaacggccct
tactcgcagacggagagcaatgggcgtatccatgccaatgggaccacagaacacccagaa
actatttttgacaagatcgaggagcttaaaatcaccaacacagccaatgacgaagaggaa
gaggaagaggaggagagtgtctccacagactctctctctgaaatttccaagtttgaaatt
cccagcccagaccttagcttccagcccgacgaacacctcgaggtttatgtttctgcgtcg
gagaacccaaaccacttttggatccagatcctcggggtgcgttcccttcagctggacaaa
ctgatgcaggagatgaaccgcttctacaacagtggcaaccccggcgagcagagggtggag
accattgtggtgggggacattgtggccgctccgtaccacgaccacggtacatggaacagg
gccagggtgctgggagtgctgggctccggactggtggacctctactacgttgactttggg
gacaacggggagctgccacgagacggcctctgccgtatgaggagtgacttcctcagctta
ccattccaagccattgagtgcaacttagcaggagtgagaccaaaaggagaggtgtggact
gaggccgccttggatgagttcgagcagctgacaagctgcgcctgctggagacccctgcag
gccaaactgtgcagctactcccactctgacatctcctcctggcccagcgtcaagctctac
gacaacagcactgtagatatcggcgaggagctcgtacggctgggccatgccgtcagcttc
caggaggcggtgagcgggaggaccgagggctgtctccagaggatgctggacgacgtgata
ggagcgtcatcggagcttagtctctcctgcatcagcttatccgaagctgcttcaatctca
ggaagcgtagacgatgtcatagaagacgagctgctctga
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