Cyclopterus lumpus (lumpfish): 117748320
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Entry
117748320 CDS
T09199
Symbol
srsf2a
Name
(RefSeq) serine and arginine rich splicing factor 2a
KO
K12891
serine/arginine-rich splicing factor 2/8
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum03040
Spliceosome
clum05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117748320 (srsf2a)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
117748320 (srsf2a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
clum03041
]
117748320 (srsf2a)
Spliceosome [BR:
clum03041
]
Common components
Common spliceosomal components
SR proteins
117748320 (srsf2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBD_AKAP-17A
RRM_PARP14_3
RRM_3
RRM_occluded
Nup35_RRM_2
RRM_8
Motif
Other DBs
NCBI-GeneID:
117748320
NCBI-ProteinID:
XP_034413824
Ensembl:
ENSCLMG00005021771
UniProt:
A0A8C3AXQ5
LinkDB
All DBs
Position
19:complement(14473460..14477170)
Genome browser
AA seq
223 aa
AA seq
DB search
MSYGRAPPDVEGMTSLKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFAFV
RFHDKRDAEDAMDAMDGALLDGRELRVQMARYGRPPDSMYSRKGAPPRRSGGGYGGRRSR
SRSGSPRRRRRSRSRSRSRSRSRSRHHYSRSRSHSDSRSRSKSKSKSKSRTPRRSKTKSP
SRSRSSKSKSRSRTPPSNRGSKSRSRSKSKSRPKSPEDNGAEA
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atgagctacggaagggcgccgccagacgtggaggggatgacctccctgaaagtggacaac
ctgacttaccgaacttctccggagactctgcgccgagttttcgagaagtacggccgcgtt
ggagacgtgtacatcccccgcgacaggtacaccaaggagagccgcgggttcgccttcgtg
cggttccacgacaagcgcgacgccgaggacgccatggacgcgatggacggcgcgctgctc
gacggccgggagctccgggtgcagatggcccgctacgggagacccccggactccatgtac
agccgtaaaggcgctccgccgcgcaggtccggaggaggttatggcggacgcagaagcagg
agccgttcaggcagccctcgtcgccgcagacggagtcgcagccgctccaggagcagaagc
cgctccaggagccgccaccactacagccgctccaggtctcactccgattccaggtcacgg
tctaaatccaagtccaaatccaagtccaggacccccagacggagcaagacaaagtctccc
tccaggtctcggtcctccaagtccaagtcaagaagtcgaaccccaccttccaacagaggg
tcgaaatccaggtctcgctccaaatccaagagtaggcctaaatctccagaagacaacgga
gcagaggcttaa
DBGET
integrated database retrieval system
