KEGG   Cyclopterus lumpus (lumpfish): 117748327
Entry
117748327         CDS       T09199                                 
Symbol
sgca
Name
(RefSeq) alpha-sarcoglycan isoform X1
  KO
K12565  alpha-sarcoglycan
Organism
clum  Cyclopterus lumpus (lumpfish)
Pathway
clum04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:clum00001]
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    117748327 (sgca)
SSDB
Motif
Pfam: Sarcoglycan_2 Sarcoglycan_2_C DUF3377 Syndecan
Other DBs
NCBI-GeneID: 117748327
NCBI-ProteinID: XP_034413843
Ensembl: ENSCLMG00005006968
LinkDB
Position
19:15589997..15596699
AA seq 398 aa
MAGCRSSVFFLTVCVASLFEANAEIKYTIPVGKFFTYELLRETFQNDFEPLSKLYAERFY
DDPMVFKCNRQNFPDLPEWLRFTQRHPYDNGFLYGTPTSPGKTVIEIYAVNRRSYDAARH
ILVIKATAEKTLPYQAEFFLKLREIEKVLPSSVQGEIKQDVQKLWDTKALEIINITNALD
RGGRVPLPLAGHFEGVYVKVGSERYFSDCLMRVTTPEHQKQCKAGDKVKVKVPGGCNFCN
IPSNCITWCKTELFDLTKRQPAPPAPAMGSGILEDGGDFSAPESPPSRDFFPDYIVTVIV
PLILAIVLCLLLAYIMFGRREGVAKRNARTNQIQLYHHHTIHGNADELRSMAADRGAPPP
RSTLPMFNFRSGGGAPDSPSIPLILAQHDPYSDTLPRK
NT seq 1197 nt   +upstreamnt  +downstreamnt
atggcaggctgccggagctcggtcttctttctaacagtttgtgtggccagtttgttcgag
gccaatgcagagatcaaatacactattcccgtgggcaagttcttcacatatgagctgctg
agagagactttccagaatgactttgaaccgttgtcaaaactttacgccgagcgcttttac
gatgaccccatggtttttaagtgcaatcggcagaattttccagacctcccggagtggctg
cgcttcacccagaggcacccctacgacaatggcttcctgtacggcacgccgacgtctcca
ggaaaaactgtaattgagatctacgccgtcaacagacggagctacgacgcggccagacac
atcctggtgatcaaagccacagcggagaagacgctgccctatcaagcagagttcttcctc
aagctgagggagattgagaaggtgctgccctcttctgttcagggtgagataaagcaggac
gtccagaagctgtgggacaccaaggccttggagatcatcaacatcaccaacgccctcgac
cggggcggcagggtcccgctccctctcgcgggacacttcgaaggcgtgtacgtgaaggtg
gggtcggagaggtatttctccgattgcctcatgagggtgacgacgccagagcatcagaag
cagtgcaaggcgggggacaaggtcaaggtcaaggtcccgggaggctgcaacttctgcaac
attcccagcaactgcatcacctggtgcaagacggagctgttcgatctgacgaagcggcag
ccggcgccgcctgcccccgcgatgggttcggggatcctggaggacggcggtgacttcagc
gcccccgagtctcccccgagccgagacttcttcccggactacatcgtcacggtgatcgtg
cccctgatcctcgccatcgtcctctgcctgctgctggcctacatcatgttcggccgacgg
gagggagttgcgaaaaggaatgcaagaacaaatcaaatccagctgtaccaccaccacacg
attcacgggaacgcggacgagctgaggagcatggctgcagaccgcggcgcgcctccgcct
cggtccacgctgcccatgttcaacttccggtctggaggcggagctccggacagccccagc
atccccctcatcctggcccagcatgatccgtacagtgacacgctgcccaggaaatga

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