Cyclopterus lumpus (lumpfish): 117748327
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Entry
117748327 CDS
T09199
Symbol
sgca
Name
(RefSeq) alpha-sarcoglycan isoform X1
KO
K12565
alpha-sarcoglycan
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
117748327 (sgca)
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GFIT
Motif
Pfam:
Sarcoglycan_2
Sarcoglycan_2_C
DUF3377
Syndecan
Motif
Other DBs
NCBI-GeneID:
117748327
NCBI-ProteinID:
XP_034413843
Ensembl:
ENSCLMG00005006968
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Position
19:15589997..15596699
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AA seq
398 aa
AA seq
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MAGCRSSVFFLTVCVASLFEANAEIKYTIPVGKFFTYELLRETFQNDFEPLSKLYAERFY
DDPMVFKCNRQNFPDLPEWLRFTQRHPYDNGFLYGTPTSPGKTVIEIYAVNRRSYDAARH
ILVIKATAEKTLPYQAEFFLKLREIEKVLPSSVQGEIKQDVQKLWDTKALEIINITNALD
RGGRVPLPLAGHFEGVYVKVGSERYFSDCLMRVTTPEHQKQCKAGDKVKVKVPGGCNFCN
IPSNCITWCKTELFDLTKRQPAPPAPAMGSGILEDGGDFSAPESPPSRDFFPDYIVTVIV
PLILAIVLCLLLAYIMFGRREGVAKRNARTNQIQLYHHHTIHGNADELRSMAADRGAPPP
RSTLPMFNFRSGGGAPDSPSIPLILAQHDPYSDTLPRK
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atggcaggctgccggagctcggtcttctttctaacagtttgtgtggccagtttgttcgag
gccaatgcagagatcaaatacactattcccgtgggcaagttcttcacatatgagctgctg
agagagactttccagaatgactttgaaccgttgtcaaaactttacgccgagcgcttttac
gatgaccccatggtttttaagtgcaatcggcagaattttccagacctcccggagtggctg
cgcttcacccagaggcacccctacgacaatggcttcctgtacggcacgccgacgtctcca
ggaaaaactgtaattgagatctacgccgtcaacagacggagctacgacgcggccagacac
atcctggtgatcaaagccacagcggagaagacgctgccctatcaagcagagttcttcctc
aagctgagggagattgagaaggtgctgccctcttctgttcagggtgagataaagcaggac
gtccagaagctgtgggacaccaaggccttggagatcatcaacatcaccaacgccctcgac
cggggcggcagggtcccgctccctctcgcgggacacttcgaaggcgtgtacgtgaaggtg
gggtcggagaggtatttctccgattgcctcatgagggtgacgacgccagagcatcagaag
cagtgcaaggcgggggacaaggtcaaggtcaaggtcccgggaggctgcaacttctgcaac
attcccagcaactgcatcacctggtgcaagacggagctgttcgatctgacgaagcggcag
ccggcgccgcctgcccccgcgatgggttcggggatcctggaggacggcggtgacttcagc
gcccccgagtctcccccgagccgagacttcttcccggactacatcgtcacggtgatcgtg
cccctgatcctcgccatcgtcctctgcctgctgctggcctacatcatgttcggccgacgg
gagggagttgcgaaaaggaatgcaagaacaaatcaaatccagctgtaccaccaccacacg
attcacgggaacgcggacgagctgaggagcatggctgcagaccgcggcgcgcctccgcct
cggtccacgctgcccatgttcaacttccggtctggaggcggagctccggacagccccagc
atccccctcatcctggcccagcatgatccgtacagtgacacgctgcccaggaaatga
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