Cyclopterus lumpus (lumpfish): 117748410
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Entry
117748410 CDS
T09199
Name
(RefSeq) protein jagged-1a-like
KO
K06052
jagged-1
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04330
Notch signaling pathway
clum04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
117748410
04371 Apelin signaling pathway
117748410
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
clum04090
]
117748410
CD molecules [BR:
clum04090
]
Proteins
117748410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
hEGF
EGF_TEN
MNNL
JAG1
EGF_2
DSL
EGF_DL_JAG
EGF_Teneurin
EGF_CA
JAG1-like_EGF2
Motif
Other DBs
NCBI-GeneID:
117748410
NCBI-ProteinID:
XP_034414055
Ensembl:
ENSCLMG00005010394
UniProt:
A0A8C2Z708
LinkDB
All DBs
Position
1:complement(22735330..22759749)
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AA seq
1205 aa
AA seq
DB search
MTLTRSSVLLLPVSLQLLLLSARMQVSSASGHFELQILSMQNVNGQLQTGACCDAGGPAD
ECDTYFRACLKEYQLKVSSAGPCSFGSASTPVLGGNTFSLRGAAESDKAGMALPFSFAWP
RSYTLIVEALDFNNDSTSGSVGGALIEKAVHSGMINPSRQWQNLKHNGPVAQFHFQVRLS
CDEHYYGFGCNKFCRPRDDFFGHYECDHNGNKTCLEGWAGPDCNTAICRQGCSTEHGSCK
GPGECKCLYGWQGEYCDQCIPHPGCVHGSCVEPWQCLCDTNYGGQLCDKDLNTCATLQPC
LNRGTCSNTGPDKYHCSCPDGFSGVNCHRADHACLSSPCLGGGSCVETSQGFECRCAPGW
TGPSCSDDVDECLGNPCRHGGSCQNMENGFQCTCPPEWTGKTCLLDANECDDSPCANANS
CRNLIGGYFCECVPGWTSPNCDTNINDCRGQCQNGATCKDLVNGYRCACAPGFAGEHCEK
DVDECAGGPCLNGGRCHDAVNGFHCLCPPGFSGSRCQLDIDYCLHSPCQNGGQCFNLAAE
YVCKCPDDFEGRNCSRLRDHCRTTPCKVIDSCTVAVASNSTPGGVRLISSSVCGPHGRCL
SQAGGQFSCECDEGFTGTYCHENINDCESAPCLNGGTCIDKVSRYQCICTVGWDGPTCQN
NIDDCSSAPCRNRGVCRDLINDFRCECNNGWKGKTCHSRESQCDEATCNSGGTCYDEGDA
FKCLCAAGWEGATCNIAKSSSCVPSPCENGGTCLVAGGSFSCLCKEGWEGATCSHNANDC
RPHPCYNSGTCVDGDNWYRCECAAGFAGPDCRINIDDCQSLPCSFGSTCEDEINAFRCAC
PPGRTGARCQEASGRPCVVGGLVALDGSRWDEGCNACRCHNGRIVCTKAQCISPAHRAPP
TSRCHSESSCANVTFTFNKDIMAMGVTVEQVCRELRGLYVGKNLSSSSSSSSSSSSSVTC
EPSLSASKEIHVAISTEDRRRGLTFVKEVTDRIMELVAKRSANSTVIGAIAEVRIQRRPS
RGPDADHLVPLLVSAVLVVWALAIASMLLWFARRRRRKRSARAGVSAQAAAAAEDSASFA
PVAEDNNALHNSVSTAREQLNHIKNPIVKNTPNHHHPHNHHHLLLHHHLLCDDKNAVNAK
IRKSDAGSQSEDDEMDKRLQKARFPRAAPAYSLVDWEDRPPPHRTSKRDNRQLQSQSVNR
MEYIV
NT seq
3618 nt
NT seq
+upstream
nt +downstream
nt
atgaccctcacacggagctccgtgctcctcctccccgtcagcctgcagctcctgctgctc
tccgcccgcatgcaggtttcttccgcctcgggacacttcgagctccagatcctgtcgatg
cagaacgtgaacgggcagctgcagaccggcgcctgctgcgacgccggcggcccggcggac
gaatgcgacacctacttccgggcgtgcctgaaggagtaccagctgaaggtgtcctcggcc
gggccctgcagcttcggcagcgcctccacgcccgtgctcggcgggaacaccttttctttg
cgcggagccgccgagagcgacaaggccgggatggcgctgccgttcagcttcgcgtggccg
aggtcgtacacgttgatcgtggaagccttggacttcaacaacgactcgacctccggcagc
gtcggcggggcgctgatcgagaaggccgtccactcggggatgatcaaccccagccgtcag
tggcagaacctgaagcacaacggccccgtggcccagttccacttccaggtccgcctcagc
tgcgacgagcactactacggcttcggctgcaacaagttctgccgcccgcgagacgacttc
ttcggccactacgagtgcgaccacaacggcaacaagacgtgcctggagggctgggccggg
ccggactgcaacaccgcgatctgcaggcagggctgcagcacagaacacggatcctgtaaa
ggtcccggagagtgcaagtgtctgtacggctggcagggggagtactgtgaccagtgtatc
cctcatcccggctgtgttcacggcagctgtgtggagccctggcagtgtctctgcgacacc
aactatggagggcagttgtgtgacaaagatctgaacacgtgcgcgacgctgcagccgtgt
ctgaacagaggaacctgcagcaacacgggaccagacaagtaccactgctcctgccccgac
ggcttctcgggggtcaactgtcatcgagcggaccacgcctgtctgtccagcccctgtctg
ggcggaggaagctgtgtggagaccagtcagggtttcgagtgtcgctgcgcccccgggtgg
accggaccctcctgctccgacgatgtggacgagtgtctggggaacccctgcaggcacggc
gggagctgccagaacatggagaacgggttccagtgcacttgcccgcctgagtggaccgga
aagacctgcctcctcgacgccaacgagtgtgacgacagcccgtgcgccaacgccaactcc
tgccgaaatctgatcggaggatacttctgcgagtgcgtcccgggctggacgagcccgaac
tgcgacaccaatatcaacgactgtcgaggtcagtgtcaaaacggagcgacgtgcaaggac
ctggtgaacggttaccgatgcgcgtgcgctccgggtttcgccggcgaacactgcgagaaa
gacgtggacgagtgcgccggcgggccgtgcctcaacggcggccgttgccacgacgcggtc
aacggcttccactgcctgtgtccccccggtttctctggaagtcgctgtcagctggatatc
gattactgcctccacagtccgtgtcaaaacggcggccagtgtttcaacctggcggcggaa
tacgtctgcaaatgtcccgacgacttcgagggcaggaactgctcgcgcctgagggaccac
tgccgcacgacgccctgcaaagtgattgacagctgcacggtggcggtggcgtccaacagc
acgccgggcggggtgcgtttgatttcgtccagcgtgtgtggaccccacgggcggtgtctg
agtcaggccggcggacagttcagctgcgagtgcgatgaaggtttcaccgggacgtactgc
cacgagaacatcaacgactgcgagagcgccccctgtctgaatggaggaacctgcatcgat
aaagtcagtcggtatcagtgcatctgcaccgtcggctgggacggaccgacctgccagaac
aacatcgacgactgtagctccgccccttgtcgtaaccgcggcgtctgtcgagacctcatc
aacgatttccgctgcgagtgcaacaacggctggaagggcaagacctgccactcgagagag
agccagtgcgacgaggcgacctgcaacagcggaggaacctgctacgacgaaggagacgcc
ttcaagtgtctgtgtgccgctggctgggagggcgccacctgcaacatcgcgaagagcagc
agctgtgtgccgagtccctgtgagaacggaggaacctgcttggtggccggaggctcgttc
agctgcctctgcaaggagggctgggagggcgccacctgcagccacaatgccaacgactgc
cgtcctcatccctgttacaacagcggcacctgtgtggacggagacaactggtatcggtgt
gaatgcgctgcggggttcgccggcccggactgcaggatcaacatcgacgattgccagtcg
ttgccctgctccttcggctccacctgcgaggacgaaatcaacgctttccgctgcgcctgc
ccgccggggagaaccggcgcccgctgccaggaagcgtcggggcggccctgtgtggtcggg
gggctcgtggctctggacggaagccggtgggacgaaggctgcaacgcgtgccgctgtcac
aacgggaggatcgtctgcaccaaggcgcagtgcattagccccgcccaccgggccccgccc
acatccaggtgtcactcggagagcagctgcgccaacgtcaccttcaccttcaacaaggac
atcatggcgatgggcgtgacggtggagcaggtgtgccgcgagctcaggggcctctacgtc
ggcaagaacctctcctcctcctcctcctcctcctcctcctcctcctcctccgtgacctgc
gagccgtcgctcagcgccagcaaggagatccacgtcgccatctcgacggaggaccggcgg
agaggtctgaccttcgtgaaggaggtcacggaccggatcatggagctggtcgccaagcgg
agcgccaacagcaccgtcatcggcgccatcgcagaggtccggatccagaggaggccgagc
cgcggccccgacgctgaccacctcgtgcccctcctggtttccgcggtgctcgtcgtctgg
gcgttggcgatcgcctcgatgctgctgtggttcgcgaggaggcggaggaggaagcggagc
gcccgcgcgggggtcagcgcgcaggcggcggcggcggcggaggattcggcgtcttttgcg
ccggttgccgaggacaacaacgccctccacaacagcgtcagcaccgcccgcgagcagctc
aaccacatcaagaaccccatcgtgaaaaacacgcccaaccaccaccacccacacaaccac
caccacctcctcctccaccaccacctcctctgcgacgacaagaacgccgtcaacgccaag
atcaggaagtcggacgccgggagccaatcggaggacgacgagatggacaagcggctgcag
aaggcgcggttcccccgggcggcgccggcgtactcgctggtggactgggaggaccgcccc
cccccacaccggactagcaaacgggacaaccggcagctgcagtcgcagagtgtcaacagg
atggagtacatcgtataa
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