KEGG   Cyclopterus lumpus (lumpfish): 117748454
Entry
117748454         CDS       T09199                                 
Name
(RefSeq) vinculin
  KO
K05700  vinculin
Organism
clum  Cyclopterus lumpus (lumpfish)
Pathway
clum04510  Focal adhesion
clum04520  Adherens junction
clum04810  Regulation of actin cytoskeleton
clum04820  Cytoskeleton in muscle cells
clum05100  Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:clum00001]
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    117748454
   04520 Adherens junction
    117748454
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    117748454
   04810 Regulation of actin cytoskeleton
    117748454
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05100 Bacterial invasion of epithelial cells
    117748454
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:clum04812]
    117748454
   04147 Exosome [BR:clum04147]
    117748454
Cytoskeleton proteins [BR:clum04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Cross-linking proteins
     117748454
Exosome [BR:clum04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   117748454
SSDB
Motif
Pfam: Vinculin Talin_IBS2B Mob_Pre
Other DBs
NCBI-GeneID: 117748454
NCBI-ProteinID: XP_034414119
Ensembl: ENSCLMG00005007232
LinkDB
Position
19:11844431..11868551
AA seq 1065 aa
MPVFHTKTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTAPVAAVQAAVSNLVRVGKD
TVQTTEDQIMKRDMPPAFIKVENACTKLVQAASMLKADPYSVPARDYLIDGSRGILSGTS
DLLLTFDEAEVRKIIRVCKGILEYLTVAEVVESMEDLITYTKNLGPGMTKMAKMIDERQQ
ELTHQEHRVMLVNSMNTVKELLPILISGIKIFVTTKTSGSQGVEEALKNRNFTFEKMSAE
INEIIRVLQLTSWDEDAWANKDTEAMKRALGLIDSKMAQAKNWLRDPNAQPGDAGEQAIR
QILDEAGKVGELCAGKERRDVLGTAKTLGQMTDQVSEIRARGHGASPTAMQKAQQVSQGL
DVLTGKVVNAARKLEAMTNSKQAIAKRIDGAQNWLADPKGGPEGEENIKALLIEAKRIAD
MCEDPKERDDILRSIGEIAAMTAKLSDLRRQGKGDTPEARALAKQIATSLQNLQSKTNKA
VANSRPAKAAVHLEGKIEQAQRWIDNPTMDDSGVGQAAIRGLAAEGRRLANALPGPYRQE
LLGKCEQVEQFMAQLADLAARGEGDSPQARAVAQQLQEALKDLKGKMQEAMTQEVSDIFS
DTTTPIKLLAVAATAPLDSPNRDEVFDERAANFENHANKLGTTAEKAAAVGTANKSTVEG
IQAAVKSTRDLTPQVVSAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVDEAIDTK
SLLDASEDAIKKDLEKCRLAMANHQPQMLVAGATSIARRANRILLVAKREVENSEDPKFR
EMVKAASDGLSQTISPMVMDAKAVAGNIQDPSLQKGFLDSGYNILGAVAKVREAFQPQEP
DFPPPPPELEQLNLNDEAAPPKPPLPEGEVPPPRPPPPEEKDEEFPEQTGDMVNEPMMVA
ARQLHDEARKWSSKGNDIIGAAKRMALLMAEMSRLVRGGGGNKRALIQCAKDIAKASDEV
TRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKATMLGRTNISEEESEQATE
MLVHNAQNLMQSVKETVREAEAASIKIRTDAGFTLHWIRKTPWYQ
NT seq 3198 nt   +upstreamnt  +downstreamnt
atgccggtctttcacacgaagacgatagaaagtatcctggagccggtggctcaacagata
tcccatctggtgataatgcacgaagaaggtgaagttgacgggaaagccattccggatctg
acggcgccggtggctgccgtgcaggcggctgttagcaaccttgttcgtgtggggaaagac
accgtgcaaaccacagaggaccagatcatgaaaagggacatgccaccagcttttatcaaa
gtggagaatgcgtgcactaaactggtacaagctgcctccatgctgaaagctgatccatac
tctgttcctgctcgggattacctcattgatggctctcggggcatcctctctgggacctcc
gacctgctcctgacctttgacgaagccgaggtccgcaaaataatccgtgtgtgcaaaggc
atcctggagtacctgacagtggcagaggtggtggagtccatggaggacttgatcacgtac
acaaagaacctgggaccaggcatgacaaagatggcaaagatgatagatgagcgacagcag
gagctgacgcatcaggagcaccgtgtgatgttggtcaactccatgaacacagtcaaagag
ctgctgcccatcctcatctcaggtataaaaatctttgtgacaaccaagacatctggcagc
cagggcgtggaggaggccttgaagaaccgtaacttcacttttgagaagatgagcgccgag
ataaacgagatcatcagagtgctgcagctcacgtcctgggacgaggacgcctgggccaac
aaggacacagaggccatgaagagggctttggggcttatcgactcaaagatggctcaggct
aagaactggctgagagatcccaacgctcaaccaggggatgcaggcgagcaggccatccgc
cagattcttgatgaagctgggaaagttggtgagctgtgtgctgggaaggagcgcagagat
gtcctgggcacagccaagaccctgggccagatgactgaccaggtgtctgagatcagggcc
agaggtcatggggcatccccgactgccatgcagaaggcgcagcaggtttcccaggggctt
gacgtgctaactggcaaggttgtaaatgctgctcgcaagctggaggccatgaccaactcc
aagcaggctattgccaaaaggatcgatggtgcacagaactggctggcagatcctaaaggc
gggccagagggagaagagaacatcaaggccctgcttattgaggccaaaaggatagcagac
atgtgtgaggacccgaaagaaagggatgacatcttgcgctctattggagagatcgctgcc
atgactgccaaactgtctgatctcagaagacagggtaaaggtgacactcctgaagccaga
gctttggctaaacagatcgcaacatctctgcagaacctgcagtccaagaccaacaaagct
gtggccaacagcaggcctgctaaggcagctgttcacttggaaggaaagattgagcaagcg
cagcgctggatcgacaatcccaccatggatgacagcggagtgggccaggcagccatccgt
gggctggcggccgagggccgcaggctggccaacgctctgccgggtccgtacaggcaggag
ctgctgggtaagtgtgagcaggtggagcagttcatggcccagctagccgacctggctgcc
cgtggtgaaggcgactcccctcaggcacgagctgttgctcagcagctccaggaggctttg
aaagatctaaaagggaagatgcaagaggcgatgactcaagaggtgtcggacatcttcagt
gacaccaccacccccatcaagttactggcagtggctgccaccgcccccctggactcgccc
aacagagatgaggtctttgacgaaagggctgccaactttgagaaccacgccaataagctt
ggcaccacagcagagaaggctgctgctgtcggtactgccaacaaaagcacggtggaggga
atccaggctgctgtcaagtcaacaagagacttaacaccacaagttgtatctgctgctcgt
attctgctgagaaaccccggcaaccaagctgcatatgaacattttgaaaccatgaagaat
cagtggattgacaatgtggagaaaatgacaggtttggtggacgaggccatcgataccaaa
tccttgctggatgcctcagaagacgccatcaagaaggacctggaaaagtgccgtttggcc
atggccaaccaccagcctcagatgctggtcgccggcgccaccagcatcgctcgcagagcc
aaccgtatcctcctggtggcgaagcgagaggtggagaactctgaggatcctaaattcagg
gagatggtgaaggctgcgtctgatggcctgagccagacaatttctcctatggtgatggat
gctaaagcagtggctggaaatatccaggatccaagtcttcagaaaggcttcctggactca
ggttataacattcttggtgctgtggcaaaggtcagggaggcattccagccccaggagcca
gacttcccaccacctcctcctgaactggagcagcttaatcttaacgatgaggcagcacca
cccaaaccacctcttcctgagggtgaggttcctccccccaggcctcctcccccagaggaa
aaagatgaggagttccctgagcagactggcgatatggttaacgagcccatgatggtagct
gccaggcagctccacgatgaagcccgcaaatggtccagtaaaggaaatgacatcatcggt
gctgctaaacgaatggccttgctcatggctgagatgtctcgtctggtgcgtggaggaggt
ggaaacaagcgcgccctcatccaatgcgccaaggacattgctaaggcttctgatgaagtc
acacggctggccaaggaggtggccaagcagtgcactgacaagcgtatccggaccaacctg
ctccaggtgtgcgagcgtattcctaccatcagcactcagctcaaaatcctgtccacagtc
aaggccaccatgttgggtcgtaccaacatcagtgaagaggagtcagaacaggctaccgag
atgttggtccacaacgctcaaaacctgatgcagtctgtgaaggagacagtccgggaggct
gaggcagcttccattaagatccgtacagatgctggtttcaccctgcactggatcagaaag
accccctggtaccagtaa

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