Cyclopterus lumpus (lumpfish): 117748454
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Entry
117748454 CDS
T09199
Name
(RefSeq) vinculin
KO
K05700
vinculin
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04510
Focal adhesion
clum04520
Adherens junction
clum04810
Regulation of actin cytoskeleton
clum04820
Cytoskeleton in muscle cells
clum05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
117748454
04520 Adherens junction
117748454
09142 Cell motility
04820 Cytoskeleton in muscle cells
117748454
04810 Regulation of actin cytoskeleton
117748454
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
117748454
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
clum04812
]
117748454
04147 Exosome [BR:
clum04147
]
117748454
Cytoskeleton proteins [BR:
clum04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
117748454
Exosome [BR:
clum04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
117748454
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vinculin
Talin_IBS2B
Mob_Pre
Motif
Other DBs
NCBI-GeneID:
117748454
NCBI-ProteinID:
XP_034414119
Ensembl:
ENSCLMG00005007232
LinkDB
All DBs
Position
19:11844431..11868551
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AA seq
1065 aa
AA seq
DB search
MPVFHTKTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTAPVAAVQAAVSNLVRVGKD
TVQTTEDQIMKRDMPPAFIKVENACTKLVQAASMLKADPYSVPARDYLIDGSRGILSGTS
DLLLTFDEAEVRKIIRVCKGILEYLTVAEVVESMEDLITYTKNLGPGMTKMAKMIDERQQ
ELTHQEHRVMLVNSMNTVKELLPILISGIKIFVTTKTSGSQGVEEALKNRNFTFEKMSAE
INEIIRVLQLTSWDEDAWANKDTEAMKRALGLIDSKMAQAKNWLRDPNAQPGDAGEQAIR
QILDEAGKVGELCAGKERRDVLGTAKTLGQMTDQVSEIRARGHGASPTAMQKAQQVSQGL
DVLTGKVVNAARKLEAMTNSKQAIAKRIDGAQNWLADPKGGPEGEENIKALLIEAKRIAD
MCEDPKERDDILRSIGEIAAMTAKLSDLRRQGKGDTPEARALAKQIATSLQNLQSKTNKA
VANSRPAKAAVHLEGKIEQAQRWIDNPTMDDSGVGQAAIRGLAAEGRRLANALPGPYRQE
LLGKCEQVEQFMAQLADLAARGEGDSPQARAVAQQLQEALKDLKGKMQEAMTQEVSDIFS
DTTTPIKLLAVAATAPLDSPNRDEVFDERAANFENHANKLGTTAEKAAAVGTANKSTVEG
IQAAVKSTRDLTPQVVSAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVDEAIDTK
SLLDASEDAIKKDLEKCRLAMANHQPQMLVAGATSIARRANRILLVAKREVENSEDPKFR
EMVKAASDGLSQTISPMVMDAKAVAGNIQDPSLQKGFLDSGYNILGAVAKVREAFQPQEP
DFPPPPPELEQLNLNDEAAPPKPPLPEGEVPPPRPPPPEEKDEEFPEQTGDMVNEPMMVA
ARQLHDEARKWSSKGNDIIGAAKRMALLMAEMSRLVRGGGGNKRALIQCAKDIAKASDEV
TRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKATMLGRTNISEEESEQATE
MLVHNAQNLMQSVKETVREAEAASIKIRTDAGFTLHWIRKTPWYQ
NT seq
3198 nt
NT seq
+upstream
nt +downstream
nt
atgccggtctttcacacgaagacgatagaaagtatcctggagccggtggctcaacagata
tcccatctggtgataatgcacgaagaaggtgaagttgacgggaaagccattccggatctg
acggcgccggtggctgccgtgcaggcggctgttagcaaccttgttcgtgtggggaaagac
accgtgcaaaccacagaggaccagatcatgaaaagggacatgccaccagcttttatcaaa
gtggagaatgcgtgcactaaactggtacaagctgcctccatgctgaaagctgatccatac
tctgttcctgctcgggattacctcattgatggctctcggggcatcctctctgggacctcc
gacctgctcctgacctttgacgaagccgaggtccgcaaaataatccgtgtgtgcaaaggc
atcctggagtacctgacagtggcagaggtggtggagtccatggaggacttgatcacgtac
acaaagaacctgggaccaggcatgacaaagatggcaaagatgatagatgagcgacagcag
gagctgacgcatcaggagcaccgtgtgatgttggtcaactccatgaacacagtcaaagag
ctgctgcccatcctcatctcaggtataaaaatctttgtgacaaccaagacatctggcagc
cagggcgtggaggaggccttgaagaaccgtaacttcacttttgagaagatgagcgccgag
ataaacgagatcatcagagtgctgcagctcacgtcctgggacgaggacgcctgggccaac
aaggacacagaggccatgaagagggctttggggcttatcgactcaaagatggctcaggct
aagaactggctgagagatcccaacgctcaaccaggggatgcaggcgagcaggccatccgc
cagattcttgatgaagctgggaaagttggtgagctgtgtgctgggaaggagcgcagagat
gtcctgggcacagccaagaccctgggccagatgactgaccaggtgtctgagatcagggcc
agaggtcatggggcatccccgactgccatgcagaaggcgcagcaggtttcccaggggctt
gacgtgctaactggcaaggttgtaaatgctgctcgcaagctggaggccatgaccaactcc
aagcaggctattgccaaaaggatcgatggtgcacagaactggctggcagatcctaaaggc
gggccagagggagaagagaacatcaaggccctgcttattgaggccaaaaggatagcagac
atgtgtgaggacccgaaagaaagggatgacatcttgcgctctattggagagatcgctgcc
atgactgccaaactgtctgatctcagaagacagggtaaaggtgacactcctgaagccaga
gctttggctaaacagatcgcaacatctctgcagaacctgcagtccaagaccaacaaagct
gtggccaacagcaggcctgctaaggcagctgttcacttggaaggaaagattgagcaagcg
cagcgctggatcgacaatcccaccatggatgacagcggagtgggccaggcagccatccgt
gggctggcggccgagggccgcaggctggccaacgctctgccgggtccgtacaggcaggag
ctgctgggtaagtgtgagcaggtggagcagttcatggcccagctagccgacctggctgcc
cgtggtgaaggcgactcccctcaggcacgagctgttgctcagcagctccaggaggctttg
aaagatctaaaagggaagatgcaagaggcgatgactcaagaggtgtcggacatcttcagt
gacaccaccacccccatcaagttactggcagtggctgccaccgcccccctggactcgccc
aacagagatgaggtctttgacgaaagggctgccaactttgagaaccacgccaataagctt
ggcaccacagcagagaaggctgctgctgtcggtactgccaacaaaagcacggtggaggga
atccaggctgctgtcaagtcaacaagagacttaacaccacaagttgtatctgctgctcgt
attctgctgagaaaccccggcaaccaagctgcatatgaacattttgaaaccatgaagaat
cagtggattgacaatgtggagaaaatgacaggtttggtggacgaggccatcgataccaaa
tccttgctggatgcctcagaagacgccatcaagaaggacctggaaaagtgccgtttggcc
atggccaaccaccagcctcagatgctggtcgccggcgccaccagcatcgctcgcagagcc
aaccgtatcctcctggtggcgaagcgagaggtggagaactctgaggatcctaaattcagg
gagatggtgaaggctgcgtctgatggcctgagccagacaatttctcctatggtgatggat
gctaaagcagtggctggaaatatccaggatccaagtcttcagaaaggcttcctggactca
ggttataacattcttggtgctgtggcaaaggtcagggaggcattccagccccaggagcca
gacttcccaccacctcctcctgaactggagcagcttaatcttaacgatgaggcagcacca
cccaaaccacctcttcctgagggtgaggttcctccccccaggcctcctcccccagaggaa
aaagatgaggagttccctgagcagactggcgatatggttaacgagcccatgatggtagct
gccaggcagctccacgatgaagcccgcaaatggtccagtaaaggaaatgacatcatcggt
gctgctaaacgaatggccttgctcatggctgagatgtctcgtctggtgcgtggaggaggt
ggaaacaagcgcgccctcatccaatgcgccaaggacattgctaaggcttctgatgaagtc
acacggctggccaaggaggtggccaagcagtgcactgacaagcgtatccggaccaacctg
ctccaggtgtgcgagcgtattcctaccatcagcactcagctcaaaatcctgtccacagtc
aaggccaccatgttgggtcgtaccaacatcagtgaagaggagtcagaacaggctaccgag
atgttggtccacaacgctcaaaacctgatgcagtctgtgaaggagacagtccgggaggct
gaggcagcttccattaagatccgtacagatgctggtttcaccctgcactggatcagaaag
accccctggtaccagtaa
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integrated database retrieval system