Cyclopterus lumpus (lumpfish): 117748462
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Entry
117748462 CDS
T09199
Name
(RefSeq) tripartite motif-containing protein 65-like
KO
K12031
tripartite motif-containing protein 65
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
clum04121
]
117748462
Ubiquitin system [BR:
clum04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
117748462
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
PRY
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_4
RING_XB3-XBAT31
zf-C3HC4_3
zf-RING_2
zf-C3HC4_2
zf-B_box
Prok-RING_4
zf-RING_5
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
117748462
NCBI-ProteinID:
XP_034414129
LinkDB
All DBs
Position
19:complement(4017221..4023547)
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AA seq
514 aa
AA seq
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MSALSSEMESLNCVICLDRFMIPVTIPCGHTFCHKCITIHWDTKSKSQIGPQCPICNEKF
ATRPVLKRNVSMSVLTEAANSAGPSCPELLMRGAEGTKLLCDRHKKPLVYYCRHDKMSVC
CECGISECVNHEKVMLEEERGAQELLLKRKREEVEKLTEETQKSISDMVENIVQAKVTLQ
QTSTWVSVKFSSLIKILVEKQEATELFVEGQREAAVAEAEARLAELEERSRILRESQGQI
AAVLVLSDTDLIKRSMILEVPRFKDIPTDVTPNLQDRLTGVTDVLSRVSKLVFEDLEKAV
SAAVGPDEDGSPQDKRPVLAVVPSPAAPCHPGGKEGLNAYRCSLTFDPCTANGHLFLSQE
DRRAEHLTSGPRPVPVHEARFDHTWQVLCLQGFTRGQHYWELEVSKPWAYLGVTYETIPR
KEKGKRCMVGMNELSWSLQLDEHQLSAWHNGRRETLAGASQHGRIGMLLDYEAGTLTYYG
DGQTRLHAFHCAFSRELFPACWIGEGVSVTLCST
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atgtctgctctgtcttcagagatggagtctctgaactgcgtcatatgcctggaccgtttc
atgatcccggtgacaatcccctgcggccacaccttttgtcataagtgcatcaccatccac
tgggacaccaaaagcaagtcccaaatcggaccccagtgcccgatctgcaatgagaagttt
gccacccggcccgttctcaagcgcaacgtgtccatgtcggtcctgaccgaggctgcgaac
agcgcgggcccctcctgtccagagttgctcatgaggggggccgaagggaccaagctgctg
tgcgaccgccataaaaaacctctggtttattactgcaggcatgacaagatgtccgtgtgt
tgcgagtgcggcatctctgaatgcgtgaaccatgagaaggtcatgctggaggaggaaagg
ggtgcccaagagctgctgctgaaaaggaagagggaggaggtggagaaactcaccgaggag
acgcagaaaagtatttcggacatggttgagaatatcgtccaagctaaggtgactcttcag
cagacttctacctgggtcagtgtcaagttctcctccctgattaaaatactggttgagaag
caggaggctacagagctctttgttgaggggcagagagaagctgccgtcgccgaggcggag
gcgaggctggctgaactcgaggagcgctcccggatactccgagagagccagggacagata
gcagctgtgcttgtcctctctgatacagatctcatcaagagatcaatgatcctcgaagtt
ccacgtttcaaagatattcccacagacgtcacgccgaaccttcaagatcgactgaccggg
gtcaccgacgtcctgtccagagtctctaagctggtgtttgaggacctggagaaagctgtg
agcgccgctgtgggtccggacgaagacggttctcctcaggataagaggccggtcctagct
gtcgttcccagtccagctgctccgtgccacccgggtgggaaggagggcctcaatgcttac
cggtgctctctgacctttgacccctgcacggccaacgggcacctgtttctctcccaggag
gaccgcagggcggagcacctgacctctgggccgcgccccgttccggtccatgaagcgcgc
ttcgatcacacgtggcaggtgctctgcttacagggcttcactcgtggacagcactactgg
gagctggaggtgtccaagccctgggcctacctgggggtgacctacgagaccatccccagg
aaggagaagggcaagaggtgcatggtgggtatgaacgagctgtcctggagcctgcagctg
gacgagcatcagctcagcgcctggcacaacggccggcgggagactctggccggagcctcg
cagcacggccgcatcggcatgctgctggactacgaggcgggcaccctcacctactacgga
gacgggcagaccaggctgcacgcgttccactgtgccttcagccgggagctgttccccgcc
tgctggatcggcgagggggtcagcgtcaccctctgctccacatga
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