Cyclopterus lumpus (lumpfish): 117748486
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Entry
117748486 CDS
T09199
Name
(RefSeq) synaptic vesicle membrane protein VAT-1 homolog
KO
K23167
synaptic vesicle membrane protein VAT-1
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
clum03029
]
117748486
Mitochondrial biogenesis [BR:
clum03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Fission and Fusion factors
117748486
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Gene cluster
GFIT
Motif
Pfam:
ADH_zinc_N_2
ADH_N
ADH_zinc_N
ADH_N_2
Asp_decarbox
Motif
Other DBs
NCBI-GeneID:
117748486
NCBI-ProteinID:
XP_034414182
Ensembl:
ENSCLMG00005002042
LinkDB
All DBs
Position
19:11107556..11118974
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AA seq
463 aa
AA seq
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MPTYHTLLRLEKLFPFSLSICLSECQRPNTLNSQVVMMSGEEALTQQQPPEQEGKPDEPS
PAASEAPEESASTPAAAEETPLSYRALVLTGHGGYEKVKLQVKTQTRPQLLAGDVLVRVK
ACGLNFSELLGRQGLYELLPAPPVIMGMEGSGVIEAVGEGVKDREVGDRVIVLSRNGMWQ
EAVVVSANLTFAMPEQMSFEEGAALPVNYVTAYMMLFEMANVRPGKSVLIHMAAGGVGVA
VTQLCQTVPDVTVFGTASATKHETIAQGGVTHPIDYRTKDYVEEIRKISPKGVDIVLDPL
GGSDTQKGFGLLKPLGTLVVFGAANCVTGQKKNLLAMAKTWYNQLSLTALKLMQANKSVC
GFHLGYITDEELIRTTMVKLLELYEQGKIKPRIDSCYHFEEVTDAMRRMQERQNIGKVIL
LPEAKTEEVKSKSNPEPVEKVEQTEAAVNEKEEEATEEVKAEG
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgccaacgtaccacacattattgcgtttagagaaactctttcctttctccctgagtatt
tgtttgtcggagtgtcaacgcccaaacacgctgaactcacaagtggtcatgatgtctggc
gaagaggctctaactcagcagcaacccccagaacaggaggggaagcccgacgaaccttcg
ccggctgcgtcggaggctccggaggagtcggcgagcacccctgcagcagccgaggagaca
cccctctcctaccgggctctggtcctgacgggccacgggggctacgagaaagtcaagctg
caggtgaagacgcagacgcggccgcagctgctggcaggagacgtcctggtgcgcgtcaag
gcgtgcgggctgaacttctccgagctcctgggcagacaggggctgtacgagctgctgccc
gccccgcctgtcatcatggggatggagggctccggggtcatcgaagccgtcggggagggt
gtgaaggacagggaggtgggggatagagtcatcgtgttgagccgcaatggcatgtggcag
gaagctgttgttgtgtccgcaaacctcaccttcgccatgcccgagcagatgagctttgag
gaaggtgctgctctccccgtaaactacgtgaccgcctacatgatgctgtttgagatggcc
aatgtgagaccgggcaagagtgttctcatccatatggcagcaggtggtgttggtgtcgct
gtcacccagctgtgtcagactgtgccagatgtgacagtttttggcactgcatcagccacc
aaacatgagactattgcccaaggcggtgtaactcaccccatcgactaccgcaccaaagac
tacgtggaggaaattcgcaaaatcagcccaaaaggagtggacatcgtcctcgacccactc
gggggttcagacacccagaaaggctttggtttgttgaaacctctgggcacgcttgtagtc
tttggtgcagccaattgtgtgactggccagaagaagaacctgttggccatggcaaagacc
tggtacaaccagctctctctcactgcactcaaactgatgcaggccaacaagtccgtctgc
ggcttccacctgggctacatcacggatgaggagctcatcagaacgacgatggtcaagctg
ctggagctctacgagcagggaaagatcaagccccgcattgactcatgctatcacttcgag
gaggtgactgatgccatgagacgcatgcaggaacgccaaaacattgggaaagtcatcctt
cttcctgaagcgaagacggaggaagtgaaatcaaagtccaaccctgagccggtagaaaaa
gtggaacaaactgaggctgccgtcaacgagaaggaagaagaggccacagaggaagttaaa
gcagagggttga
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