Cyclopterus lumpus (lumpfish): 117748496
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Entry
117748496 CDS
T09199
Name
(RefSeq) LOW QUALITY PROTEIN: WD repeat domain phosphoinositide-interacting protein 1-like
KO
K17908
autophagy-related protein 18
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04136
Autophagy - other
clum04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
117748496
04136 Autophagy - other
117748496
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
clum04131
]
117748496
03029 Mitochondrial biogenesis [BR:
clum03029
]
117748496
Membrane trafficking [BR:
clum04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
117748496
Mitochondrial biogenesis [BR:
clum03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
117748496
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_Prp19
WD40_MABP1-WDR62_2nd
WD40
WDR55
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
Beta-prop_Vps41
Beta-prop_RSE1_2nd
CPSF_A
Beta-prop_NWD2_C
Beta-prop_EML
EIF3I
Beta-prop_HPS5
Beta-prop_WDR35_TULP_N
RMC1_N
BCAS3_WD40
Motif
Other DBs
NCBI-GeneID:
117748496
NCBI-ProteinID:
XP_034414203
Ensembl:
ENSCLMG00005014473
LinkDB
All DBs
Position
19:complement(7365684..7372279)
Genome browser
AA seq
366 aa
AA seq
DB search
MPRRMNVYHFKKGTEICNYSYSNNILSVRLNRQRLVVCLEESVYIHNIKDMKLLKTLLNT
PTNPTGLCALSVNHSNSYLAYPGSATIGEITVYDANNLSTLTLIQAHDSPLAALTFNGSG
TKLASASEKGTVIRVFSVPEGQRLFEFRRGMKRYVSISSLSFSADAQFLCASSNTETVHI
FKLEQHSPSLDEESPTWSAYMGKMFTAASTYLPSQVSDMMHQDRAFATVRLNMFGLKNIS
ALATIQKLPRLLVASSDGCLYIYNVDPQDGGECVQIQKHRMFDSSEEQVETEGEENPEDV
SPQPASQSYAATVALPSTPPSSTTLTGYSEDGGVEKGDVIPEHEFAEGPVCLDDENEFPP
FGNQSN
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgccacggcgaatgaacgtttaccacttcaagaaaggcaccgagatttgtaactacagc
tactccaacaacatcctctccgtccggctcaacagacagcggctggtggtgtgcttggag
gagtcggtctacatccacaatatcaaagacatgaaactactcaaaaccctgctaaacaca
cccaccaaccccacaggtctttgtgcgctctccgtcaaccacagtaactcctacctggcg
tacccgggaagcgctaccatcggagagatcaccgtctacgacgccaacaacctgagcacc
ctgacgctgatccaagcccacgacagtcccctggcggccctcaccttcaatggctctggc
accaaactggccagcgcttcagagaagggcaccgttatcagagtcttcagcgttcctgaa
ggacagagactgtttgaattccgtagaggcatgaaaagatatgttagcattagttcattg
tccttcagcgccgacgcccagttcctgtgcgcctccagcaacactgagacagtccatatc
tttaaactggagcagcacagcccaagtctagacgaggagtctcctacatggtcggcatac
atgggcaaaatgttcacagcagccagcacctacttgcccagccaggtgtccgacatgatg
catcaggacagagccttcgccacagtgcgactcaacatgttcggcctcaagaacatcagc
gccctcgctacgattcagaagctccctcgcctgctggtggcgtcctcagacgggtgtctc
tacatttataatgtggatccacaggatggtggcgagtgcgtccagatccagaaacacagg
atgtttgactccagcgaggagcaggtagaaacagaaggcgaggagaatccagaggatgtc
tctccccaaccagccagccaatcgtacgctgccactgtggctctcccttcaaccccgccc
tcctccaccactctcacgggttactctgaggacggtggagtcgagaagggtgatgtcatc
ccagagcacgagtttgccgagggccccgtctgcctggacgacgagaacgagttccctcca
ttcggcaaccagagtaattga
DBGET
integrated database retrieval system
