Cyclopterus lumpus (lumpfish): 117748547
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Entry
117748547 CDS
T09199
Symbol
trim16
Name
(RefSeq) tripartite motif-containing protein 16
KO
K12006
tripartite motif-containing protein 16 [EC:
2.3.2.27
]
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
clum04121
]
117748547 (trim16)
Enzymes [BR:
clum01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117748547 (trim16)
Ubiquitin system [BR:
clum04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
117748547 (trim16)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
PRY
zf-B_box
ANCHR-like_BBOX
FapA
DUF4407
COG6_N
Remorin_C
Motif
Other DBs
NCBI-GeneID:
117748547
NCBI-ProteinID:
XP_034414284
Ensembl:
ENSCLMG00005002154
UniProt:
A0A8C2WI40
LinkDB
All DBs
Position
19:complement(17176299..17185135)
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AA seq
649 aa
AA seq
DB search
MADTAAGGPAAGGPPAGGPAAGGPPAGGPAAGGPAGGPAGGPAAGGPAPGSGVPSGSSSV
SGSCNGVQSEVKSPQCPGPVPKQNGTGIGSKEEQDPKGAEEEETKIQEDLKESEDPEKPE
GEPHADRGLENGAPEEEAKEEPPGPDDVVCDSCIESPCRALKSCLTCLVSYCEAHLRPHL
ENPKFQNHRLVEPLRDIERRTCESHKWPLELFCCADERCVCQDCVEEEHRGHNTVPVEEA
RGRIEKELREKHGEMVKTVKAGENAINKLQLNTVSIEHSVTEVRAVIESQFEELQAVLER
AKREVTEILEGEEKQALRQAEGIRVHLEQRCTELKKTQGQMEKLAKNKNDVDFLQEYSEW
KKEATDISLPGVYIGLTDRLNSFSRVIVDSTEELCAMLVSSYIDKVKETCTSDKMGIKTT
VHEIIATKHNMMLPDPKTHEDFLNYVAPVSFDGDTAHKFLRLTEEGRKVTNTTPWQHPYP
DAPERFDNWRQVLATESFYLGRHYFEADISGEGTHIGLTYKSIDRKGNESNGCITGNNFS
WCLQWNGRTFSAWHSDVETPLTVEKFTRIGVYVDYTRGLLAFYGVDGAMTLIHEYKADFL
EPIYPAFWLSKKENVVALVAPGEPLRLKSPSPPTSPACGSIVSKLAAQQ
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atggcagatacagcggcaggaggaccagcggcaggaggaccaccggcaggaggaccagcg
gcaggaggaccaccggcaggaggaccagcggcaggaggaccagcaggaggaccagcagga
ggaccagcggcaggaggaccggcccccggctcaggtgtgccgagcgggagcagctctgtt
tctggctcctgcaacggggtccaaagcgaggtcaaaagcccccagtgccctggaccagtg
cccaaacagaacgggactgggatcgggagcaaagaggagcaggaccctaagggggcggag
gaggaggagaccaaaatccaggaagacctgaaggagtccgaggaccccgagaagcccgag
ggggagccgcatgcggacagagggctggaaaacggagcccccgaagaggaggcgaaggag
gagccgccgggccccgatgacgtggtgtgcgactcgtgcatcgagagcccctgcagggcc
ctcaagtcctgcctcacctgcctggtgtcctactgcgaggcccacttgcggccgcacctg
gagaaccccaagtttcagaaccaccggctggtggagccgctgcgggacatcgagcggcgg
acctgcgagagccacaagtggcccctggagctcttctgctgcgccgacgagcgctgcgtg
tgccaggactgcgtggaggaggagcaccggggccacaacacggtgcccgtggaggaggct
cgcggacgcatagagaaggagctgagggagaagcacggcgagatggtgaagacggtgaag
gccggcgagaacgccatcaacaagctccagctcaacacggtgtccatcgagcactcggtg
acggaggtgcgagcggtgatcgagagccagttcgaggagctgcaggcggtgctggagcgg
gccaagcgggaggtgacggagatcctggagggcgaggagaagcaggcgctgaggcaggcc
gagggcatccgggtccacctggagcagaggtgcacggagctgaagaagacgcagggccag
atggagaagctcgccaagaacaaaaacgatgtggatttcttacaggagtattccgagtgg
aagaaggaggccactgacatctctctgcccggcgtctacatcggcctgacggaccgcctg
aactccttcagccgtgtgatcgtggactccacggaggagctgtgcgccatgctggtgtcc
tcgtacatcgacaaggttaaagagacgtgcacgagcgacaaaatgggaataaagacgacc
gttcacgaaattattgcaaccaagcacaacatgatgttaccggatccaaagacacacgag
gacttcctcaattatgtcgcccccgtgagtttcgacggcgacaccgctcacaagttcctg
aggctgacggaggaaggcaggaaggtgaccaacaccacgccctggcagcacccttatccc
gacgcgcccgagaggttcgacaactggcgccaggtgctggcgacggagagcttctatctg
gggcggcactacttcgaggcggacatcagcggcgagggcacgcacatcggcctgacctac
aagagcatcgaccgcaagggcaacgagagcaacggctgcatcacggggaacaacttctcc
tggtgcctccagtggaacgggcgcaccttctccgcctggcacagcgacgtggagacgccc
ctcaccgtggagaagttcacgcgcatcggggtctacgtggactacacccgaggcctcctg
gcgttctacggcgtggacggcgccatgacgctcatccacgagtacaaggcagacttcctg
gagcctatttacccggctttctggttgtccaagaaggagaacgtcgtcgccttggtggcg
ccgggggaaccgctgcggctcaaaagcccctctcctcccacctcacctgcatgcggatct
attgtttctaaactagcagcacagcaatga
DBGET
integrated database retrieval system
