Cyclopterus lumpus (lumpfish): 117748579
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Entry
117748579 CDS
T09199
Name
(RefSeq) integrin beta-3-like
KO
K06493
integrin beta 3
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum03266
Virion - Herpesvirus
clum04081
Hormone signaling
clum04145
Phagosome
clum04148
Efferocytosis
clum04510
Focal adhesion
clum04512
ECM-receptor interaction
clum04810
Regulation of actin cytoskeleton
clum04820
Cytoskeleton in muscle cells
clum05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
117748579
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
117748579
04512 ECM-receptor interaction
117748579
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
117748579
04148 Efferocytosis
117748579
09144 Cellular community - eukaryotes
04510 Focal adhesion
117748579
09142 Cell motility
04820 Cytoskeleton in muscle cells
117748579
04810 Regulation of actin cytoskeleton
117748579
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
117748579
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
clum04131
]
117748579
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
clum04147
]
117748579
04515 Cell adhesion molecules [BR:
clum04515
]
117748579
04090 CD molecules [BR:
clum04090
]
117748579
Membrane trafficking [BR:
clum04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
117748579
Exosome [BR:
clum04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
117748579
Cell adhesion molecules [BR:
clum04515
]
Integrins
Integrin beta subunits
117748579
CD molecules [BR:
clum04090
]
Proteins
117748579
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_b_cyt
Integrin_B_tail
PSI_integrin
EGF_2
I-EGF_1
EGF_integrin
EGF_TEN
EGF_Teneurin
Motif
Other DBs
NCBI-GeneID:
117748579
NCBI-ProteinID:
XP_034414362
Ensembl:
ENSCLMG00005001895
LinkDB
All DBs
Position
19:11010266..11026900
Genome browser
AA seq
823 aa
AA seq
DB search
MKKAFFLCSCTSTTARWPAPSSQRACARMGALPARGILWMCVLILTGITGVCGSIVCTSR
GASTCKQCLAVHPSCAWCLQEDFGQGVASSSRCDLKSNLVAAGCALSALESPTSKLQVIE
DRPLSNKAAGATQDATQIKPQKLHITLRPDDAKRFTVRVRQVEDYPVDLYYLMDLSYSMN
DDLFRLRTLGKGLAEAMNRTTSNLRMGFGAFVDKPLSPYMYISPKEAVKNPCYSINTTCL
PQFGYKHVLSLTEEVGRFTEEVKKQMVSRNRDAPEGGFDAIIQAAVCKEEIGWRPGASHL
LIFTSDAKTHVALDGRLAGIVQPNDGQCHLNSDNMYSMSTTMDYPSLALITEKMSENNIN
LIFAVTNPVVPLYQNYSELIPGTTVGTLSNDSGNVIQLILKAYAKIRSKVELEVHGVPDE
LSLSFNATCLNGELIPGLKSCSGLKIGDTVSFSVEARARGCPKQKKKTFIIKPVGFKDSL
SVTVNFECDCKCQTKAQPTSPKCNQGNGTYECGICLCHPGRLGPHCECAEGDYDPTEQDR
CSGPEGSGGPQSAICSGRGDCVCGQCVCHSSDFGKVWGKLCECDDFNCLRYKGDLCSGHG
VCNCGFCQCAPDWQGENCNCSRRTDTCMSNLGLLCSGRGQCVCGACECTQPGAYGATCDK
CPTCPDACTMKKECVECKHFKRGKLFDDNTCSRICKDEIVLVDEIVLHDTNAVNCTYKDE
DDCVERFQYYEDTSGKSILFVVKEPDCPKGPDILVVLLSVAGAILFLGLAALLIWKLLVT
IHDRREFAKFEEERARAKWDTGHNPLYKGATSTFTNITYRGKD
NT seq
2472 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaggcttttttcttgtgttcttgtacttccaccacagctcgttggccagctccg
tcctcacagagagcgtgcgccaggatgggtgctctcccggcgcgagggatattatggatg
tgtgtgttgatcttgactggaataacaggagtatgcggttcaattgtctgcacctccaga
ggagccagcacatgcaagcaatgtctggctgtgcaccccagctgtgcgtggtgcctccag
gaggacttcggacagggcgttgccagttcttcccgctgtgatctgaagagtaacctggtg
gcagcgggctgtgctctgtcagctctggagtctccgaccagcaaactgcaggtgattgag
gaccggcccctcagcaacaaggcagcgggggccacacaagacgccactcagataaagccc
cagaaactacacatcaccctccggccagatgatgctaagcgcttcacagtgagggtgcgt
caggtggaggactaccctgtggatctctactacctcatggatctctcttactccatgaat
gatgatctgttccgcctgaggaccctgggcaaaggcctggccgaggccatgaaccgcacc
accagcaaccttcgcatgggctttggggcttttgtggacaagccgctctccccttacatg
tacatctcccccaaagaggccgtgaagaacccatgctacagcattaacaccacctgcctg
cctcagtttggctacaaacatgttctgtccctgacggaggaggtgggccgcttcacagag
gaagtgaagaagcagatggtgtccaggaaccgagatgccccggagggaggctttgatgcc
atcatccaggcggctgtgtgcaaggaggagatcggctggcgccccggtgcatcccacctt
ctgatcttcacctcagacgctaagactcacgtcgctcttgatggtcgtctggctggaatc
gtgcagcccaacgacgggcagtgtcacctcaactctgacaatatgtacagcatgtctacc
accatggattacccatctttagctctgatcacagagaagatgtcggagaacaacatcaat
ctcatctttgctgtcaccaaccctgtggttcctctgtaccagaactacagtgagctgatt
cctggcaccacagtaggaacactgtccaacgactctggcaatgtgatccagctcatactg
aaggcctacgctaaaattcgttccaaggtggagctggaggttcatggcgtcccggacgag
ctgtccctgtccttcaacgccacctgtctgaatggagagctcatccctggtctcaaatcc
tgctctgggctcaagataggagacacggtctctttcagcgtggaggccagagctcgaggt
tgccccaaacagaagaagaaaaccttcatcattaagccggtgggcttcaaggattccctc
tccgtcaccgtcaactttgagtgcgactgcaagtgccagaccaaggcccagcccactagc
cccaagtgtaaccaaggcaacggcacctacgagtgtggcatttgcctgtgccacccgggt
cgcttagggcctcactgcgagtgtgcagagggtgactatgaccccacggagcaggaccgc
tgcagcgggcccgaaggctctggaggaccacagtctgccatctgcagcggccgtggtgac
tgtgtgtgcggccagtgtgtgtgccacagcagtgactttggaaaagtctgggggaagctg
tgtgagtgtgatgacttcaactgcctgcgctacaagggggacctgtgctcgggccacggc
gtctgtaactgtggcttctgccagtgtgccccagactggcagggggagaactgtaactgc
tcgagacgcaccgacacctgtatgtccaacctgggcttgttgtgcagcggtaggggccag
tgtgtgtgcggggcctgtgagtgcacccagcccggtgcctacggagccacatgtgacaag
tgccccacgtgcccggatgcctgcaccatgaagaaggagtgtgtggagtgtaaacacttc
aagaggggcaagctgtttgacgacaacacctgctctcgaatctgcaaggacgagattgtg
cttgtggatgaaatagtgctccatgatacaaatgctgtgaactgcacttacaaagatgag
gatgactgcgtggagcgtttccagtattatgaggacaccagtgggaagtccatcttgttt
gtcgtcaaagagcccgactgtcccaagggtccagacattttagtggtgctcctgtcggtg
gccggagccatcttgttccttggcttggcggctttacttatctggaaacttctggtcacc
atccacgacagacgggagttcgccaaatttgaggaagaacgcgctcgtgccaagtgggac
acgggacacaatcctctctacaaaggagccacatctaccttcacaaacatcacatacaga
ggaaaagactga
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