KEGG   Cyclopterus lumpus (lumpfish): 117748579
Entry
117748579         CDS       T09199                                 
Name
(RefSeq) integrin beta-3-like
  KO
K06493  integrin beta 3
Organism
clum  Cyclopterus lumpus (lumpfish)
Pathway
clum03266  Virion - Herpesvirus
clum04081  Hormone signaling
clum04145  Phagosome
clum04148  Efferocytosis
clum04510  Focal adhesion
clum04512  ECM-receptor interaction
clum04810  Regulation of actin cytoskeleton
clum04820  Cytoskeleton in muscle cells
clum05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:clum00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03266 Virion - Herpesvirus
    117748579
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04081 Hormone signaling
    117748579
   04512 ECM-receptor interaction
    117748579
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    117748579
   04148 Efferocytosis
    117748579
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    117748579
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    117748579
   04810 Regulation of actin cytoskeleton
    117748579
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    117748579
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:clum04131]
    117748579
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:clum04147]
    117748579
   04515 Cell adhesion molecules [BR:clum04515]
    117748579
   04090 CD molecules [BR:clum04090]
    117748579
Membrane trafficking [BR:clum04131]
 Endocytosis
  Phagocytosis
   Integrins (complement receptors)
    117748579
Exosome [BR:clum04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   117748579
Cell adhesion molecules [BR:clum04515]
 Integrins
  Integrin beta subunits
   117748579
CD molecules [BR:clum04090]
 Proteins
  117748579
SSDB
Motif
Pfam: Integrin_beta Integrin_b_cyt Integrin_B_tail PSI_integrin EGF_2 I-EGF_1 EGF_integrin EGF_TEN EGF_Teneurin
Other DBs
NCBI-GeneID: 117748579
NCBI-ProteinID: XP_034414362
Ensembl: ENSCLMG00005001895
LinkDB
Position
19:11010266..11026900
AA seq 823 aa
MKKAFFLCSCTSTTARWPAPSSQRACARMGALPARGILWMCVLILTGITGVCGSIVCTSR
GASTCKQCLAVHPSCAWCLQEDFGQGVASSSRCDLKSNLVAAGCALSALESPTSKLQVIE
DRPLSNKAAGATQDATQIKPQKLHITLRPDDAKRFTVRVRQVEDYPVDLYYLMDLSYSMN
DDLFRLRTLGKGLAEAMNRTTSNLRMGFGAFVDKPLSPYMYISPKEAVKNPCYSINTTCL
PQFGYKHVLSLTEEVGRFTEEVKKQMVSRNRDAPEGGFDAIIQAAVCKEEIGWRPGASHL
LIFTSDAKTHVALDGRLAGIVQPNDGQCHLNSDNMYSMSTTMDYPSLALITEKMSENNIN
LIFAVTNPVVPLYQNYSELIPGTTVGTLSNDSGNVIQLILKAYAKIRSKVELEVHGVPDE
LSLSFNATCLNGELIPGLKSCSGLKIGDTVSFSVEARARGCPKQKKKTFIIKPVGFKDSL
SVTVNFECDCKCQTKAQPTSPKCNQGNGTYECGICLCHPGRLGPHCECAEGDYDPTEQDR
CSGPEGSGGPQSAICSGRGDCVCGQCVCHSSDFGKVWGKLCECDDFNCLRYKGDLCSGHG
VCNCGFCQCAPDWQGENCNCSRRTDTCMSNLGLLCSGRGQCVCGACECTQPGAYGATCDK
CPTCPDACTMKKECVECKHFKRGKLFDDNTCSRICKDEIVLVDEIVLHDTNAVNCTYKDE
DDCVERFQYYEDTSGKSILFVVKEPDCPKGPDILVVLLSVAGAILFLGLAALLIWKLLVT
IHDRREFAKFEEERARAKWDTGHNPLYKGATSTFTNITYRGKD
NT seq 2472 nt   +upstreamnt  +downstreamnt
atgaagaaggcttttttcttgtgttcttgtacttccaccacagctcgttggccagctccg
tcctcacagagagcgtgcgccaggatgggtgctctcccggcgcgagggatattatggatg
tgtgtgttgatcttgactggaataacaggagtatgcggttcaattgtctgcacctccaga
ggagccagcacatgcaagcaatgtctggctgtgcaccccagctgtgcgtggtgcctccag
gaggacttcggacagggcgttgccagttcttcccgctgtgatctgaagagtaacctggtg
gcagcgggctgtgctctgtcagctctggagtctccgaccagcaaactgcaggtgattgag
gaccggcccctcagcaacaaggcagcgggggccacacaagacgccactcagataaagccc
cagaaactacacatcaccctccggccagatgatgctaagcgcttcacagtgagggtgcgt
caggtggaggactaccctgtggatctctactacctcatggatctctcttactccatgaat
gatgatctgttccgcctgaggaccctgggcaaaggcctggccgaggccatgaaccgcacc
accagcaaccttcgcatgggctttggggcttttgtggacaagccgctctccccttacatg
tacatctcccccaaagaggccgtgaagaacccatgctacagcattaacaccacctgcctg
cctcagtttggctacaaacatgttctgtccctgacggaggaggtgggccgcttcacagag
gaagtgaagaagcagatggtgtccaggaaccgagatgccccggagggaggctttgatgcc
atcatccaggcggctgtgtgcaaggaggagatcggctggcgccccggtgcatcccacctt
ctgatcttcacctcagacgctaagactcacgtcgctcttgatggtcgtctggctggaatc
gtgcagcccaacgacgggcagtgtcacctcaactctgacaatatgtacagcatgtctacc
accatggattacccatctttagctctgatcacagagaagatgtcggagaacaacatcaat
ctcatctttgctgtcaccaaccctgtggttcctctgtaccagaactacagtgagctgatt
cctggcaccacagtaggaacactgtccaacgactctggcaatgtgatccagctcatactg
aaggcctacgctaaaattcgttccaaggtggagctggaggttcatggcgtcccggacgag
ctgtccctgtccttcaacgccacctgtctgaatggagagctcatccctggtctcaaatcc
tgctctgggctcaagataggagacacggtctctttcagcgtggaggccagagctcgaggt
tgccccaaacagaagaagaaaaccttcatcattaagccggtgggcttcaaggattccctc
tccgtcaccgtcaactttgagtgcgactgcaagtgccagaccaaggcccagcccactagc
cccaagtgtaaccaaggcaacggcacctacgagtgtggcatttgcctgtgccacccgggt
cgcttagggcctcactgcgagtgtgcagagggtgactatgaccccacggagcaggaccgc
tgcagcgggcccgaaggctctggaggaccacagtctgccatctgcagcggccgtggtgac
tgtgtgtgcggccagtgtgtgtgccacagcagtgactttggaaaagtctgggggaagctg
tgtgagtgtgatgacttcaactgcctgcgctacaagggggacctgtgctcgggccacggc
gtctgtaactgtggcttctgccagtgtgccccagactggcagggggagaactgtaactgc
tcgagacgcaccgacacctgtatgtccaacctgggcttgttgtgcagcggtaggggccag
tgtgtgtgcggggcctgtgagtgcacccagcccggtgcctacggagccacatgtgacaag
tgccccacgtgcccggatgcctgcaccatgaagaaggagtgtgtggagtgtaaacacttc
aagaggggcaagctgtttgacgacaacacctgctctcgaatctgcaaggacgagattgtg
cttgtggatgaaatagtgctccatgatacaaatgctgtgaactgcacttacaaagatgag
gatgactgcgtggagcgtttccagtattatgaggacaccagtgggaagtccatcttgttt
gtcgtcaaagagcccgactgtcccaagggtccagacattttagtggtgctcctgtcggtg
gccggagccatcttgttccttggcttggcggctttacttatctggaaacttctggtcacc
atccacgacagacgggagttcgccaaatttgaggaagaacgcgctcgtgccaagtgggac
acgggacacaatcctctctacaaaggagccacatctaccttcacaaacatcacatacaga
ggaaaagactga

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