Cyclopterus lumpus (lumpfish): 117748583
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Entry
117748583 CDS
T09199
Symbol
sec31b
Name
(RefSeq) protein transport protein Sec31A isoform X1
KO
K14005
protein transport protein SEC31
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
117748583 (sec31b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
clum04131
]
117748583 (sec31b)
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
clum02044
]
117748583 (sec31b)
Membrane trafficking [BR:
clum04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
117748583 (sec31b)
Secretion system [BR:
clum02044
]
Sec (secretion) system
Eukaryotic Sec-SRP protein
117748583 (sec31b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_RIG_2nd
Beta-prop_EML_2
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
WD40
Beta-prop_TEP1_2nd
WDR55
Beta-prop_EML
Beta-prop_EIPR1
EIF3I
TPR_Sec16
WD40_MABP1-WDR62_2nd
Beta-prop_WDR35_TULP_N
Beta-prop_HPS5
Beta-prop_DCAF4
Beta-prop_DCAF12
Prp18
GTPase_binding
MukF_M
SMAP
Motif
Other DBs
NCBI-GeneID:
117748583
NCBI-ProteinID:
XP_034414369
Ensembl:
ENSCLMG00005013391
LinkDB
All DBs
Position
19:complement(12651525..12663564)
Genome browser
AA seq
1214 aa
AA seq
DB search
MRLKEIQRTAHQAWSPAEHHPIHLAFGTSAQQLDASFNTTAALEIFEVDFSDPSLDMQLK
GSLPTSNRLHSIVWVNFGMGADGTGGRLVGGSENGTLTVYNPEEIMSSGAEAVVGQSDKH
TGPVRALDFNPFQSNLLASGANDSEIYIWDLNNFNSPMTPGAKTQPAEDISVVSWNRQVQ
HILASASPSGKAVVWDLRKNEPIIKISDHSNRMHCSGMLWHPDVATQLVLASEDDRMPVI
QMWDLRFATSPLKVFENHTRGILSISWSQADSELLLSSAKDNRILCWNPNTGEVIYELPT
INQWCFDVQWCPRNPALLSAASFDGRITVYSVMGGSLKAQQQSTADKISSSFDSMDPFGT
GQVLPPLQVPQPAVQDTIVSPLKKPPKWVRRPVGASFAFGGKLITFENPKLPPVQSPQPV
PRQVFMSQVTTETEFIQRSRELQAALQTGSFNNYCQAKIQSAKSDAEQDIWKFLLVNFED
EARVKFLRLLGFSKDELEKKISKCLGKSFQHNGHGVDAKDLAEKMQRLSTERSDVATAVG
DARTSGSVSPADFFTQSPKENSNFQIPISCDTDGLISQALLVGNFEGAVDLCLNDGRYAE
AILLSISGGEELLKKTQQKYLSSQKNSISMLISSVVTQNWRDIVQSCELDNWKEALAALL
TYAHPEDFARLCDTLGGRLEHERTEKRCLQACLCYICSGNIEKLVECWALHRDCSSPLGL
EDLVEKVMMLRKSIERLRNSEVEIQSPILAEKLTCYAGILAAEGSLAIAMTYLPVNSDQA
GITMLKDRLFHAQEEAAVGLHHPNRVNVPTAKPTPAAQIPTPKAQIMYQPSATSQASQQQ
PAMPSIFTPQAPPGLPPFSHVLPPSGTRPALRPSYPQHPAPAPGFLPHQPFQPQPMAVGG
PSGFPPQGPSMQAANLSGPPLPPPSSTTGGLFTMPSPGVPPTSFMPSTSSPTGPMPPSSQ
PGAPVPMYPGSLYNQGPAPPMASGPYAPLGSGYPQGGPGAPAVKPFLAPAVAPPPTGFFP
WLNSQCDHQGPQEGWNDPPAVRGGPRKKKLPDNYTPPAPITAPVMGFPVEAPQPHNHTQV
PPGAPQEPSVQLLQQLPAERVEQKEIPADHMVLKSTFDSLVQRCQLAAGDPQTKRKLDDA
AKRLAYLYDKLREQSLSHNILNGLHEISRCVASQNYPRGLEVHTQVVSSSNFSEISAFMP
ILKVVMTIANKLGV
NT seq
3645 nt
NT seq
+upstream
nt +downstream
nt
atgaggctgaaggagatccagaggactgcccaccaggcgtggagtcctgccgagcaccat
ccgatccacctggccttcggaacatcagcacaacagctggatgcctctttcaacaccaca
gctgccctggagatatttgaggtggatttctcagatccatctctggacatgcagctcaaa
gggtcattacccacctcaaacaggttgcacagtatcgtatgggtgaattttggaatggga
gctgatggtactggagggagactggttggcggcagtgagaatggcacattaactgtatat
aacccagaggagataatgagctccggtgcagaggcagtagtggggcagtctgacaaacac
acaggacccgtccgagcactcgatttcaacccctttcagagtaatctcctcgcttcagga
gcaaacgattcagagatatatatctgggatctgaacaactttaacagtccaatgacccca
ggagcaaagacgcagcctgctgaagacatcagtgttgtgtcctggaacaggcaggttcag
cacatcctggcctctgccagccccagtgggaaagcagtcgtgtgggatctgagaaagaac
gagcccatcatcaagatcagtgaccacagcaacaggatgcactgttcaggaatgctctgg
cacccagatgtggccactcagttggtgctggcctctgaagatgaccgaatgccagtcatc
cagatgtgggacctccgctttgccacttcgcccctcaaagtctttgagaaccacacgagg
gggattctgtctatatcctggagccaggcggactctgagctcctgctgagtagtgctaaa
gacaacaggatcctctgctggaatccaaacactggagaggtcatctatgagcttccaaca
ataaaccagtggtgtttcgatgtccagtggtgccccaggaatccagccctcctttcagcc
gcctcatttgatggcagaatcactgtctactctgttatgggaggaagcttgaaggctcag
cagcaaagcacagctgataagatatcctcttcatttgattcaatggacccctttgggaca
gggcaggtgctcccacccctgcaagttcctcagcctgcagtgcaggacaccatagtttcc
cctctgaagaagccacctaagtgggtgcgccggccagtgggcgcttcctttgcatttggt
ggaaagctgataacatttgagaatcccaagctgcctccagtgcagagcccccagccggtc
cccagacaagtgtttatgagccaggttaccacggagacagagttcatccagcgctccagg
gagctgcaggcagcgctgcagacgggctccttcaacaactactgccaggccaagattcag
agcgccaagtcagacgctgagcaggacatatggaagttccttctggtgaactttgaggat
gaagcccgtgtgaaattcctcagacttttgggttttagcaaagatgaactggagaaaaag
atttcaaaatgcctggggaaaagttttcagcacaatggacatggagtggatgccaaagat
ctggcagaaaagatgcagcggctctccaccgagaggtctgatgtggcaactgctgtaggt
gatgccagaacctctggttctgtttccccggcagacttctttactcagtctccaaaggaa
aactccaatttccagatccctatttcgtgtgacaccgatggtttgataagccaggcgctg
ctggttggtaactttgagggagctgtggatttgtgtcttaacgacggccgttacgctgaa
gccatcctcttgtccatcagtggcggggaggagctgctcaagaaaactcagcaaaaatac
ctaagcagtcaaaagaacagcatttcaatgctcatctcatcagtggtgacccagaactgg
agagacatagtgcaaagctgtgagttagacaattggaaggaggctctcgctgctctgctg
acttacgctcaccctgaagattttgcccgtctgtgtgataccctgggaggtcggttggag
catgagaggacggagaagcgctgcctgcaggcctgcctgtgctacatctgctctgggaac
attgagaagctagtggagtgctgggccttgcatagagactgctcctcccctcttggtcta
gaggatctggttgaaaaggtaatgatgctgcgtaagtcaatcgaacgcctccgcaacagt
gaggtggagatccagagccccatcctggctgagaagctaacctgctacgctggcatactg
gctgcagagggcagtctggccattgccatgacctacctgcctgtgaactcagaccaagcc
gggatcacaatgctaaaagaccggctgttccacgctcaggaagaggctgccgttggactg
caccatccaaacagagtcaatgtgcccacagccaagcccactcctgctgctcagattcct
acaccaaaagcacaaattatgtatcagccctctgctacttcccaggctagccaacagcag
cctgctatgccgtcgatttttaccccacaggctccacctggtctgccgcctttttctcat
gtactgccgcccagtgggacccgccctgccttgaggccttcttaccctcaacatcctgct
ccggctccaggtttccttcctcatcagccattccagccccagcctatggctgttggggga
ccctcaggcttccctcctcaaggtccttccatgcaagctgctaacttatcaggacctcca
ctaccacctccgtcatcgaccactggaggcctgttcaccatgcccagccccggggtgcca
ccgacaagcttcatgccgtctacctcttcacccacgggccccatgccacccagctcccaa
cccggagccccggttcccatgtatccagggagcctctacaaccaggggcctgcacccccc
atggcatctggtccctatgcccctctcggatcagggtacccacagggaggccccggagct
cctgctgtaaagcccttcttggccccggctgttgctcctcctcctacaggattctttccc
tggctgaattcccagtgtgaccatcaaggaccccaagaaggctggaatgacccaccggca
gtacgaggtggacccagaaagaagaagctccctgataactacactccaccagcccccatc
actgcccctgtgatgggattccctgtggaggctcctcagccacacaaccacacccaggtc
ccccccggagccccccaggagcccagcgttcagcttctccagcagctgccagcggagagg
gtggagcagaaggaaatccctgctgatcacatggtcctgaaatccacctttgacagtctg
gtgcagcgctgccagctcgcagcgggagacccacaaacaaaaaggaaactagatgatgca
gccaaacgtttggcatacctgtacgacaagctgagagagcagtcgctctctcacaacatt
ctgaacgggctccacgagatcagccgctgtgtggcgagccagaactacccgcggggtctg
gaggtccacacccaggtggtcagcagcagcaacttcagcgagatctccgccttcatgccc
atcctcaaagtggtcatgaccatcgccaacaagctgggcgtctaa
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