Cyclopterus lumpus (lumpfish): 117748592
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Entry
117748592 CDS
T09199
Symbol
mms19
Name
(RefSeq) MMS19 nucleotide excision repair protein homolog isoform X1
KO
K15075
DNA repair/transcription protein MET18/MMS19
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
clum03036
]
117748592 (mms19)
03400 DNA repair and recombination proteins [BR:
clum03400
]
117748592 (mms19)
Chromosome and associated proteins [BR:
clum03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
117748592 (mms19)
DNA repair and recombination proteins [BR:
clum03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
117748592 (mms19)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MMS19_C
MMS19_N
TOR1L1_N
PP4R3
Adaptin_N
CLASP_N
API5
Motif
Other DBs
NCBI-GeneID:
117748592
NCBI-ProteinID:
XP_034414383
Ensembl:
ENSCLMG00005022310
LinkDB
All DBs
Position
19:5716381..5730109
Genome browser
AA seq
1035 aa
AA seq
DB search
MLSYRGTMAADSTLLLSLVEEFVSGLQDSKAKETATCVKDGQFTILQLVEALGLSLTSSQ
PHTRARGVQLLSDVLHDCYGGLTEREVEVLIAFFENRLKDHYVITPPVLQGLRALTKSTV
LPPGSAVSMLRSLFQDVHVQSLMLAERACVYNMLINLMATREAELKGLGADFVFGFVQSM
DGERDPRNLLLAFQIAKSIVRRGYDLGKFTEELFEVTSCYFPIDFSPPPNDPHGITREEL
IQMLRDALTGTPRFAEFLLPLIIEKLDSDVLSAKLDSLQTLIAGVSQYEHKDVAEFLEGL
WASLRREVFQTSSEKIESAGLAALTALTSCLSRSVLHSDSEDSLSTFLDLVLKDCKHHLC
EPDLKLVWPSAKLLQAACSASNRASHIITDAVMPSLVEQYNSRAQCSHRRTLLEVVQRFI
QSAKTCENEDSVFLAFRPSLCSMVFSALTETDSSLQITATSVLTSLAQQTGLLLDSDVEL
AVDHLTRLLLTEEDDKVSLAVVECAGALAELHPAAFITKLIPRLKKEMFSEPMDQGDNRL
ASETPSHHAVRQRCLSALAAVSTQPSVVQESTPVLLEVLSSAHTGGVVFSVEEVVLACHS
LQRIAKQVQDTEETGRCFHDVIIPRLLSLALQAALQGEGSSGGRSPLLEEVVLSAMVPVI
STSCSRLQPTLAGQTALRAVSLFLDGDVSFLPDNSFPSNIQLLKKQQGDSWSQSQMVCLL
LGCVCSLPRIVEVPRIDDLMAELEEMSCTCSHPLSYTSAAKCFAGLVNKRALGDCLDSLI
QRTMERVCGELDSASSSVRTQAFTLMIWVAKALLLRYHPLFTTLTDKLFSLLDDADLGPA
AADGFRLLMSESTDILNRGCHADVRIMYRQRFFSENSAKLVQGFNAAPQEKKPNYLKALS
NIVNKLPKQVQVTELPALLSLLLEALSCPDQGVQLSTLSCLEPVLVDPPPALIQQLEALV
SRLLALTSSPVMSVRIASLRCIHAISCFPEHEVLPFRTRVLRALARPLDDRKRLVRRGAV
RARAEWFLLGSPGGS
NT seq
3108 nt
NT seq
+upstream
nt +downstream
nt
atgttgagttacagaggcacgatggctgcggacagtaccctgctgctgtctctggtggag
gaatttgtctcgggactacaggacagcaaggccaaagaaaccgcaacatgtgtcaaagat
ggacagtttacaatcctgcagctggtggaagcgctgggactgagcctaaccagctcccag
cctcacacccgagccagaggagtccagcttctctctgacgttttacacgattgctatgga
ggtctcacagagagagaagtggaagtgctcattgccttctttgaaaaccgtctcaaggac
cattatgtcatcacaccccctgttttacagggactcagagcgctgacaaaatctacagtt
ttgcctcctggctccgctgtgtccatgctgaggtctttgttccaggatgttcatgttcag
tctttgatgctggccgagagagcgtgtgtctacaacatgctcatcaacctcatggcgacc
agagaagccgaactgaagggtttgggggcagactttgtgtttggttttgtccagtcaatg
gacggagagagagacccccgcaacctcctgttagccttccagatcgccaagagcatcgtc
cgccgaggttacgatctaggtaaattcacagaggagctgttcgaagtgacgtcctgctat
ttccccattgacttcagcccccctcccaacgacccccacggcatcaccagagaggagctc
atccagatgctgagggacgccctcactgggacgccacggtttgcagagtttctgctacct
ctcatcattgagaaactggactccgatgttctgagtgcgaagctggactcgctgcagact
ctgattgctggtgtgtcacaatatgaacacaaggacgtggctgaattcctcgagggactg
tgggcgtcactgcgaagagaggtgtttcagacatcgagcgagaagatcgagtcggctggc
ctcgctgctctcaccgcactcacttcctgtctgtctcgctcagtcctccactctgactct
gaggactccctcagcaccttcctggatctcgttctcaaagactgcaaacatcacctgtgt
gagccggacctgaagctggtgtggcccagtgccaagctgctacaggccgcctgcagcgcc
tccaacagggcgagccacatcattacggacgcggtcatgccctctctcgttgagcagtac
aacagcagagcacagtgttcccacagacgaacattgctcgaggtggtgcagcgattcatt
cagtcagcaaagacctgcgagaatgaagacagtgtgtttctagccttccggccgtctctg
tgcagcatggtgttttcagctctgacagagactgattccagcctgcagatcacggccacc
tctgtgctcacctcactggctcaacaaacgggtctgctgttggactctgatgttgagctg
gctgtagatcacctgaccagactgttgctgacggaagaggacgacaaagtcagccttgct
gtggtggagtgtgctggagccttagcagagttgcaccctgcagctttcatcactaaactg
atcccaagactaaagaaggagatgttttctgagccgatggatcaaggcgacaacagatta
gcttctgagacgccttcccatcatgcagtgcgccagcggtgtttgtccgctctggctgcg
gtgtccactcaacctagtgttgtccaggagagcacacctgtcctcttggaggtcctcagc
tcggcacacacgggtggtgtagttttctcagtggaggaggtggtgttggcttgtcatagt
ctccagagaatagccaagcaggtacaggacaccgaggagacgggacgatgcttccatgac
gtcatcatcccgcgcctgctgtctctggccctccaggcagcactgcagggcgaggggtca
tctggtggtcgtagtcctcttctggaggaggtggtcctgtctgccatggtcccggtcatc
agtacttcctgctccaggctgcagcccacgctggcgggacagacggcgctgagggccgtg
tctctcttcctggatggtgacgtttcctttttgcccgacaactcgttcccttcaaacatc
cagctgctcaagaagcagcagggggactcgtggagccagtcccagatggtttgtctgctc
ttgggatgcgtttgttcgttgcctcgcattgtggaggtgcctcggatagatgacctgatg
gcagagctggaggagatgagctgcacctgcagccacccgttgtcatacacctcggctgca
aagtgctttgctggcctggttaataagagagctctgggggattgtctcgacagcctcatt
cagaggaccatggagagggtttgtggtgagctggactctgcgtcttcatctgtacgcact
caggccttcaccctcatgatctgggttgccaaggccctgcttctccgataccaccctctg
ttcacaaccctgactgacaagctcttttctctgctcgatgatgctgatctgggtccagcg
gcggcagacggcttccggctgctgatgagcgagtccaccgacatcctgaaccgcggttgc
catgccgatgttcgcatcatgtaccgccagcgcttctttagcgagaattccgccaagttg
gtccagggcttcaacgccgcgccgcaagagaagaagcccaactacctgaaggctctgtct
aacattgtcaataaattgcctaagcaggttcaagtcactgaactaccagcgctgctgtct
ctgctgctggaggccttgtcgtgtccagaccagggcgtccagttgtccaccctgtcgtgt
ctggagcccgtcctcgtcgacccaccaccggcactcatccagcagctggaggcgctggtc
agcaggctgctggccctcacctccagcccagtcatgagcgtgaggatcgcctccttgcgt
tgcatccacgccatttcctgcttccccgagcatgaggtgttgccatttcggacccgagtg
ctgcgagcgctggcccggcctctggacgacaggaagaggctcgtgaggaggggggcggtt
cgggccagagcagagtggttcctgttaggaagtcctggaggaagttga
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