Cyclopterus lumpus (lumpfish): 117748596
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Entry
117748596 CDS
T09199
Symbol
vps35l
Name
(RefSeq) VPS35 endosomal protein sorting factor-like isoform X1
KO
K25731
VPS35 endosomal protein-sorting factor-like
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
clum04131
]
117748596 (vps35l)
Membrane trafficking [BR:
clum04131
]
Protein recycling
Others
Retriever complex
117748596 (vps35l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
Motif
Other DBs
NCBI-GeneID:
117748596
NCBI-ProteinID:
XP_034414392
Ensembl:
ENSCLMG00005022320
LinkDB
All DBs
Position
19:5736978..5745596
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AA seq
973 aa
AA seq
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MTRGSVSVSCQRSSARSYDTELQRCRPEAALVEFGDYHPLKPIMVTDTKTRHGARKGSTS
SSSSSSSSVAPDPLSSMLDGTDPLSMFAAASVIEAPAMSHSASTGDLGRKRKEKEEEAVG
PDFETWSSKRGEILARFTTTEKLSINLFMGSDRGKAPSPGSSAVSEKVRTRLEELDDLEE
GSQKELLNLSQQEYANRIEELNQSLKEAWASDQKVKALKIVIQCSKLLSDTSVIQFYPSK
FVLITDILDTFGRLVYDRIWTMCSDPRPLTDSFTVEDVNDTAKETCLNWFFKIASIRELL
PRLYVEAAILKCNRFLNKCGIPETLPRLTAMIRGIGDPLVAAYARAYLCRVGMEVAPHLK
DSLNRNFFDLLGTFRQVSSDSVQNQLVLQRVEVPEYLTLYSPAVNWILQCIAYRAPEPLL
TEMTERCKKLGNNALLLNSVMRAFRPEFVAARATDFIGMIKDCDEAGFPKHLLFGALGRS
LACADPPESERLTILNEAWKVITKVCSPQDYVICAEIWVEFTCRHFSKREVNTVLADVIK
HMTPDRAFEDAYPQLQSVIRKILTYFHDFSLLFSMERFLPFLDMFQKDSVRVEVCRSIMD
IFIRHQEEPSRDPVILNAMLHICKTMHDSVNALTLEDEKRSLALLIIGFIRMVSFGRDFE
QQLSFCVEARATFCNLESVLVQLIHTVNQLAMETSRVMRGNHSRKTAAFVRACAAYSFIT
IPSLSSIFSRLSLYLLSGQVALANQCLSQADAFLKAAVSLLPEVPRSISVEGKLRSSESF
LMDFINNFLATLLVVPDHPEHGVLYLVRGLLNMVQDYTWEDNSDAKVRVYISALPLLAAM
SQETYLYSIPKVDSNETLYGGDPKFLSEINKLSETLIGQILDHLKALGRDEQSTRRQGAL
AFSLFGVLLAHGDLRNNKLSQLAVNLWNLSHKYGHCETRVSVRTLECMKHQAQQADMTHL
SDTVQRLALQSRT
NT seq
2922 nt
NT seq
+upstream
nt +downstream
nt
atgacacgagggagtgttagcgtcagctgtcagcgatccagcgcacgcagctatgacacc
gagctgcagagatgtcgtcctgaggctgctctggttgagtttggagactaccatcccctc
aaacccatcatggtgactgacacaaagacccgccacggggctcgtaaaggcagcacctcc
tcgtcttcctcgtcttcctcctcggtggccccggaccccctcagctccatgctggatggg
accgaccccctctccatgtttgcagcagcctcggtcatcgaggctcctgccatgtcgcac
agcgcctccactggggacctggggaggaagaggaaggagaaggaggaagaagcagttgga
ccagactttgagacctggtcgtcgaaacgcggagagatcctggccaggttcaccaccacg
gagaagctctcaattaatctattcatgggttcggaccgaggaaaagctccaagtccagga
tcctccgccgtttctgagaaagtgcgaactcgcctggaggaactggatgatctggaggag
ggttcccagaaagagctgctgaacctctcccaacaggaatacgccaaccgcattgaggaa
ctgaaccagtccttgaaggaggcttgggcctcggaccagaaggtcaaagccctgaagatc
gtcatccagtgctccaagcttctgtccgacacctcggtgatccagttctaccccagcaag
tttgtcctcattactgatatcctcgacactttcggccggctggtgtacgacagaatctgg
accatgtgttccgacccacgacccctgaccgactcgttcacagtcgaagatgtgaacgac
acggccaaggagacgtgtctcaactggttcttcaagatcgcgtccatcagggagctcctg
ccccgattatacgtcgaggctgccattctcaagtgcaaccgcttcctgaacaaatgcggt
attccggagacgctccctcggttgacagccatgatcagagggatcggagaccccctggtg
gcggcgtacgccagagcttacctctgcagggtgggcatggaagttgccccccacctgaag
gacagcctgaaccgcaacttcttcgacctgctgggcaccttccggcaggtcagcagtgac
agcgtccagaaccagctggtcctgcagagggtggaggtgcccgagtacctgacactttat
tcacccgccgtcaactggatcttgcagtgcatcgcctacagagctccagagcctctgcta
acggagatgacggagagatgcaagaagctggggaacaatgctttgctgctgaattcagtc
atgagggcgttcaggccagagtttgtcgcggccagagccaccgacttcatcggtatgatc
aaggactgtgacgaggccggcttcccaaagcatctgttgttcggagctctgggtcgcagt
ctggcctgtgccgaccccccagaatctgaaaggctgacgatcctcaacgaagcctggaag
gtcatcaccaaagtctgcagtccccaggactacgtcatctgtgccgagatctgggtggag
ttcacctgccgacacttctccaaacgtgaggtgaacaccgttctggctgacgtcatcaaa
cacatgacccctgaccgggcgtttgaggatgcttatcctcagctgcagtcggtgatcagg
aagatcctcacctacttccacgacttctccctcctcttctccatggagcgtttcctgccg
tttttagacatgttccagaaggacagtgtgagggtggaggtgtgcagatccatcatggat
atcttcatcagacaccaggaagagcccagcagagacccggtcatcctcaacgccatgttg
cacatctgcaagaccatgcacgactctgtcaacgctctcactctcgaggatgagaaaaga
tctttggctctgctgatcatcggcttcatccgcatggtgtcttttggacgagacttcgaa
cagcagttgagtttctgtgtggaggccagagccaccttctgtaacctggagtcagtgctg
gtgcagctgattcacacggtgaaccagctggcgatggagaccagcagggtgatgagaggg
aatcactcccgcaaaacggcggccttcgtcagggcgtgcgctgcctacagtttcatcacc
atcccgtctctcagcagcatcttcagccgtctcagcctttatttgctgtctggtcaggtt
gcgttggcaaatcagtgtctctcccaggcggatgctttcctaaaggcagcagtcagtctt
cttccggaggttcctcgctccatcagcgtcgaggggaaacttcgctcttcagagagcttc
ctgatggacttcatcaacaacttcctggctacgctgctggttgtcccggaccatccagag
catggcgtgctctacctagtccgcggtttgctcaacatggtccaggattacacctgggag
gacaacagcgacgccaaggtgcgggtctacatcagcgctctgcccttgctggctgccatg
agccaagaaacctacctctactccatccctaaagtggactccaatgagacactttatgga
ggagaccccaagtttctatcggagatcaacaagctgtctgagactctgatcggacagatc
ctggaccatctgaaggccctcggtcgggacgagcaaagcacacggcgtcaaggagctctg
gccttctccctgttcggtgtcctgctggctcatggtgacctgaggaacaacaagctgagc
cagctggccgtcaacctgtggaacctcagccacaaatacggacactgtgaaacgcgagtc
tcagttcgaacccttgagtgcatgaaacaccaggctcagcaggccgacatgacccacctg
tcggatacagtccagaggctggcccttcagtcccgcacctga
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