Cyclopterus lumpus (lumpfish): 117748612
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Entry
117748612 CDS
T09199
Name
(RefSeq) liprin-alpha-3-like
KO
K26226
liprin-alpha
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
117748612
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
clum04131
]
117748612
Membrane trafficking [BR:
clum04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
117748612
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LIP-1
SAM_1
SAM_2
Motif
Other DBs
NCBI-GeneID:
117748612
NCBI-ProteinID:
XP_034414433
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Position
19:9070892..9087095
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AA seq
1217 aa
AA seq
DB search
MMCEVMPTISEDGRSGTGGGPSSPAGAGVGGSGGAMGAGGSSGREARTGGDEGGSTGNLE
SLMVNMLTERERLLENLRDTQDCLGTAQLRLRELGHEKESLQRQLSIALPQEFAVLTKEL
NVCREQLLEREEEISELKAERNNTRLLLEHLECLVSRHERSLRMTVVKRQAQSPAGVSSE
VEVLKALKSLFEHHKALDEKVRERLRVALERVSTLEDQLAASSQEVISLRDQIKRRQQGA
DGGKDRLPNGPSIGLEDSELERQREAEIERQRSELSQLKERLALMCRQVGEIEEQLATAR
REVTKSEEANQKLQREVKEALCQREDMEERITTLERRYLSAQREATSLHDIKDKLENELA
SKESLHRQSEEKNRQLQERLDEAKQKLQQTLQRAETLPEIEAQLAQRVAALNKAEERHGN
FEERLRQMEAQLEEKNQELQRARQREKMNDEHNKRLSDTVDKLLSESNERLQLHLKERMA
ALEEKNALSEELSNMKKIQDDLIANKEQLLAELERIQLELDQLRGRPGASYSRSLPGSAS
ELRYPQGGGSLPSGYSNSSGVVVRRTHRGRWGARDDNNKYGEWDSGSMLGPGYEGGDGCS
DDEDDRETLFGSELLSPSGQTDVQTLAIMLQEQLEAINKEIKLIQEEKESTELRAEEIES
RVSSVALDAPLPPSSLGGRDSIGRGYMTPSITSSTLASPSPPSSGHSTPRLPHSPARETD
RQNSKDGEECRALALIDSNPPSVPRALRLDRMTHTHPGAGLDDLREFRSLSGDGSTTASQ
DSLHKASKKKSIKSSIGRLFGKKEKGRIGAHGRESSSLASTPSDDLGSADPLGLAKLGTG
TVEKDRRSKKKHDLLEEACRQGLPFASWDGPTVVTWLELWVGMPAWYVAACRANVKSGAI
MANLSDTEIQREIGISNPLHRLKLRLAIQEMVSLTSPSAPASTRSSTSNIWMTHAEMESL
TASTKPEQKEFSWDQILAYGDMNHEWVGNEWLPSLGLPQYRSYFMESLVDARMLDHLTKK
ELRGQLKMVDSFHRVSLHYGIMCLKRLNYDRKELERRRDESQHHNQDVMVWSNERVMCWV
QSIGLKEFADNLLESGVHGALLALDDTFDYTDLALLLQIPNQNIQARQLLEKEYNALISM
GTERRPDEDGMKTFTRSPSWRKMFREKDLRGVTSDSSETLPANFRASAISTPSVTLRKVQ
SEVGPRGESGSVRTYSC
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgatgtgtgaggtgatgcccaccatttctgaggatgggcgaagtgggactggtgggggc
ccttcctcacctgccggggcaggagttggaggctccggaggtgcaatgggagcaggaggg
agcagcgggagggaggcaagaactgggggagacgaaggaggcagcacggggaacctggag
tcgttgatggtcaacatgctgaccgagagggagaggctcctggagaacctgagggacaca
caggactgcctgggcacggctcagctccgcctccgcgagctcggccacgaaaaggagtca
cttcagaggcagctatctattgccctgccgcaggagtttgctgtgttgactaaagagctg
aacgtttgccgggagcagcttctggagagggaggaggagatttctgagctcaaggcggag
agaaacaacacacgtttgttgctggaacacctggagtgtctggtatcccgccatgagcgc
agtctgaggatgacagtggtgaaaagacaagcccagtccccggcaggggtttccagtgag
gtggaagtcctcaaggccctcaagtctctgtttgagcaccacaaggctctggatgagaag
gttcgtgagaggctccgcgtggccctcgagagggtgtccacgttagaggaccaactcgca
gcatcatctcaagaggtaatctctttaagagaccaaattaaaagacgtcaacaaggggcg
gacggcgggaaagatcgactacccaatggtccctccattggcctggaggacagtgagttg
gagagacagcgagaagcagaaatagagaggcagagatctgaactctcccagctgaaggag
aggttggccctcatgtgccggcaggttggggaaatagaggaacagcttgcaaccgccagg
agggaggtgacaaagtcagaggaggccaatcagaagctccaaagggaagtgaaagaggcc
ctttgccaaagggaggacatggaggaaaggattacaacactagaacgcaggtacctcagc
gcccagagggaggcgacttctcttcatgatatcaaagacaagctggaaaatgagctggca
agcaaggaatcactgcacagacagagtgaagagaagaacagacagctacaggaacgtctg
gatgaagccaagcagaagctccagcagaccctacagagggcagagacactgcctgagatt
gaggcccagcttgcccaaagggttgctgctctcaacaaggccgaggagcgccatggaaac
tttgaggagcggctacggcaaatggaagctcaactcgaagagaagaaccaagagctacag
agggcgaggcagagggaaaagatgaatgacgaacacaacaaacgcctctcggatacagtg
gacaagcttctgtctgagtccaatgagaggctgcagctccacctcaaagagagaatggca
gcactagaggagaagaatgctctttcagaggaactgtccaatatgaagaaaatccaagat
gatcttatagctaataaggaacagctcctggctgagctggagcgcatccaactggagctg
gatcaactgagaggcaggcctggcgcttcatattccagatctctcccagggagcgcctcg
gagctgcgctacccccagggtggaggctcgctcccgtccggctacagcaactctagtggc
gtggtggtcaggcggacccatcgaggccgctggggggctcgagacgataataacaagtat
ggagaatgggacagcggcagtatgcttggtcccggctatgagggcggggacggttgctct
gacgacgaggacgacagagagaccctgtttggatcggagctgctctctcccagtggacag
acagatgtacagacgttggccatcatgctacaggagcaactggaggccatcaacaaggag
attaagctgattcaagaggaaaaagaaagcaccgaactcagggcagaagagattgagagc
cgggttagcagcgtggccctcgatgcacctcttcccccctcctctctgggaggacgtgac
agtattggcaggggatacatgactccctctatcacctcctctacgttggcgtctccctca
ccgcccagctctggacattccaccccccgcctgccacattcccctgccagggagactgac
agacagaatagcaaagatggtgaagaatgcagagcacttgccctgattgactccaaccct
ccttctgtccctcgagctctacgattggaccgtatgacacacactcacccaggggcaggc
ctcgatgacctccgggaatttcgcagtctctccggggacggctctaccactgctagccag
gattcactccataaagccagcaaaaagaaaagcattaagtcgtcaattggtcgtcttttt
ggcaaaaaggaaaaggggaggatcggtgcacatgggcgtgaatcttcctcgctggcctcc
acaccctctgacgacctgggttcagctgacccgttaggcctggctaaacttgggactgga
accgtggagaaagaccgccgcagcaaaaagaaacacgacctgttagaggaagcgtgtcgc
cagggtctgcctttcgcctcatgggatggcccgactgtcgttacgtggcttgagctgtgg
gtcgggatgcctgcatggtatgtagcagcatgtcgcgccaacgtgaagagcggtgccatt
atggccaacctgtcggacactgagatccagcgggagatcggcatcagtaaccctctacac
cggctcaaactccgtctggccatccaggaaatggtctccctcactagtccatctgcacct
gcaagcactcgctcttcgaccagtaacatctggatgacacatgctgagatggagtctctc
actgcttccaccaagccagagcagaaagagtttagctgggaccagatcctggcctatgga
gatatgaaccacgagtgggtgggaaacgagtggctgcccagcctgggtctgccccagtac
cgctcctacttcatggaatcactggtggatgcccgtatgcttgatcacctcaccaagaaa
gaactgaggggccagctgaagatggtggacagtttccacagggtgagtcttcattatgga
atcatgtgcttgaagcgcttgaactatgacaggaaggagctggagaggaggagggatgaa
agtcaacaccataaccaagatgtaatggtgtggtccaatgagcgagtgatgtgttgggtg
cagtctatcggtctgaaagagtttgctgacaacctattagaaagtggggtgcatggggca
ctcctggcactagatgacacctttgactacacagacttggccctcctcctccagataccc
aaccagaacatacaggcaaggcagctcctagagaaggagtacaatgctctcatctccatg
ggaaccgagaggagaccagatgaggatggcatgaaaacctttacacggtcaccatcatgg
aggaagatgtttagagagaaggacctccgcggcgtgacttctgactcctcagaaacatta
cctgccaacttccgtgcctccgccatctcgaccccgtccgtcactctgagaaaagttcag
agtgaagtaggtcctagaggagagtcggggtctgtgagaacatattcttgctaa
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