KEGG   Cyclopterus lumpus (lumpfish): 117748629
Entry
117748629         CDS       T09199                                 
Symbol
polr3e
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC5
  KO
K14721  DNA-directed RNA polymerase III subunit RPC5
Organism
clum  Cyclopterus lumpus (lumpfish)
Pathway
clum03020  RNA polymerase
clum04623  Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:clum00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    117748629 (polr3e)
 09150 Organismal Systems
  09151 Immune system
   04623 Cytosolic DNA-sensing pathway
    117748629 (polr3e)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:clum03021]
    117748629 (polr3e)
Transcription machinery [BR:clum03021]
 Eukaryotic type
  RNA polymerase III system
   RNA polymerase III
    Pol III specific subunits
     117748629 (polr3e)
SSDB
Motif
Pfam: RPC5 RPC5_C
Other DBs
NCBI-GeneID: 117748629
NCBI-ProteinID: XP_034414464
Ensembl: ENSCLMG00005021459
UniProt: A0A8C3AUB1
LinkDB
Position
19:complement(14295696..14307861)
AA seq 687 aa
MASGDEDDPIIEEIDVYLAKSLADKLYLFQYPVRPSTMTYDDVNHLTARIKPKQQKVELE
MAIDSLSPNYCRSKGEQIALNVDGTVYDETNTYSAKVMDKQSFTSIQATTNTSRYAAAVF
RKGELHVTPLTGILQMRPSFSYLDKADTKTREREAANEGGDSSQDEAEEDVKAITVRFSR
PESEQARQRRFQSYDFLQKKQAEEPWVHLHYHGVKDGRSEHERQYLFCQSGDTSENSELV
KTPKEYLAMLMPPIEEEKFVKPVGPSNVLSMAQLRTLPLGEQVKTLMKNVKVMPFANLMG
LLASGTDSTAALRCIQQVSLLVQGNWVVKSDVLYPKNTCSPHSGVPAEVLCRGRDFVMWR
FTMERSVMRKEIAAIIKLPPEDVKEFLEHVAVPRVNRGWEFLLTTDAEFIKKHPDIAHRQ
HMLWLGIQSKLEKVFNFSKEDFKSKNPPSPEPVHVSGEERLKVAHERAHGNKSSLQKDLD
GRRAGSSVQVKQEPVSDREDEPMDTASSSSIPNGSVNGHPGATSPAFDHTNGTAGDASSQ
ELQDFVIKTFKKHFVLTLNEFKRLLSLHLASMPVGRSVFPSISDHMLQDAILLCQCKQIL
VPFPAQSTAAPDEQKVFGLWETGQEFDKHRRLLYDLFSKNYRIRRNAVHAKLSQEFGDTP
KADVDRLLHECCISHAGMWYLKGTIQS
NT seq 2064 nt   +upstreamnt  +downstreamnt
atggccagcggggatgaggatgaccccattatagaggagatcgatgtgtatcttgccaaa
agccttgcagataagctgtatcttttccagtaccctgtccgaccatccactatgacctat
gatgatgtcaaccacttgacagctaggatcaaacccaagcagcaaaaggtggagttggaa
atggccatcgactcattgagtccaaactactgtcgcagtaaaggggagcagatcgccctg
aatgtggacggcacggtttatgacgaaaccaacacctattcagcgaaagtgatggataag
cagtccttcacctccatccaggccaccaccaacacctccagatatgctgctgctgtgttt
cgtaaaggtgagcttcacgtcacacctctgacgggaatcctccagatgagaccgagcttc
tcttacctggacaaggctgacaccaaaaccagagagagggaggcggccaatgaaggtgga
gattcctcccaggatgaggctgaggaggacgtcaaggccatcacggtgaggttttctcga
cccgagtcggagcaggcgcggcagaggaggttccagtcgtacgatttcctccagaagaag
caggcggaggagccctgggttcacctgcactaccacggtgtcaaggatgggcgctcggag
catgaaaggcagtacctgttctgtcagtccggcgacacctccgagaactctgagctggtc
aaaactcctaaggagtacctggcaatgctgatgccccctattgaagaggaaaaatttgta
aaaccagttggtcccagtaatgtgctctccatggctcaactccgcactctgccactggga
gagcaagtcaagaccctgatgaagaacgtcaaggtgatgccgttcgctaacctgatgggc
ctgctcgcctctggcactgactccactgcagcgctgcgctgcatccaacaggtgtcgctg
ttggttcagggcaactgggttgtcaagagcgatgttctgtatcccaaaaacacctgcagt
cctcacagtggcgtccctgctgaagtgctctgccgtggccgagactttgtgatgtggagg
ttcactatggagcgatctgtgatgaggaaggagattgcagccatcatcaaacttcctcca
gaagatgtgaaggagttcctcgagcatgtggccgttcctcgagtcaaccggggctgggag
ttcctgctgactactgatgcagaattcattaagaaacaccccgacattgctcacaggcaa
cacatgctgtggctcggcatccagagcaagttggaaaaggtctttaacttctccaaagaa
gacttcaagtcaaagaatcccccgtcgcctgagcctgtacacgtcagcggggaggagcgt
ctgaaggtggctcacgagcgcgctcacggaaataagtcgtccctacagaaggacctggac
ggcaggcgggcaggaagcagcgtccaggtcaaacaggaacccgtcagcgacagagaagac
gaaccgatggacaccgcctcctcctcctccatccccaacggttctgtcaatgggcacccc
ggtgccacctcccccgccttcgatcacaccaacggtaccgccggggacgcgtcgtcccag
gagctgcaggactttgtgataaagactttcaagaagcattttgtactgacgctgaacgag
ttcaagaggctgttgagcctccacctggcctccatgccggtgggccggagcgtcttcccc
tccatctcggaccacatgctacaggacgcgatactgctctgccagtgcaaacagatactg
gtgccttttcctgctcagtccacagcagcccccgatgagcagaaggtgtttggtttgtgg
gagactggacaggaattcgacaagcatcgtcggctgctgtatgaccttttcagcaagaac
taccgcatcaggaggaacgcggtccatgccaaactgtctcaggagttcggagacaccccg
aaggcggacgttgaccggctgctccatgagtgctgcatcagccacgcggggatgtggtac
ctgaagggaacgatccagtcctga

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