Cyclopterus lumpus (lumpfish): 117748667
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Entry
117748667 CDS
T09199
Name
(RefSeq) LOW QUALITY PROTEIN: calcium-activated potassium channel subunit alpha-1-like
KO
K04936
potassium large conductance calcium-activated channel subfamily M alpha member 1
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
117748667
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
clum04040
]
117748667
Ion channels [BR:
clum04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
117748667
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Gene cluster
GFIT
Motif
Pfam:
Slo-like_RCK
Slowpoke_C
BK_channel_a
Ion_trans
Ion_trans_2
Motif
Other DBs
NCBI-GeneID:
117748667
NCBI-ProteinID:
XP_034414531
Ensembl:
ENSCLMG00005007604
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All DBs
Position
19:complement(12155404..12227178)
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AA seq
1179 aa
AA seq
DB search
MSKRFNPDPSVHISKMSVIIPFSPDVPCDSNGQRMWWAFLASSMVTFFGGLFIILLWRTL
KYLWTVCCHWNAKKKEVHRLSTGDGIKRTDKDDPAASEVGWMTSVKDWAGVMISAQTLTG
RVLVVLVFALSIGALVIYFIDSSDPIESCQNFYKDFTLQIDMAFNVFFLLYFGLRFIAAN
DKLWFWLEVNSVVDFFTVPPVFVSVYLNRSWLGLRFLRALRLIQFSEILQFLNILKTSNS
IKLVNLCSIFISTWLTAAGFIHLVENSGDPWENFKNSQALSYWECVYLLMVTMSTVGYGD
VYAKTTLGRLFMVFFILGGLAMFASYVPEIIELIGNRKKYGGSYSAVNGRKHIVVCGHIT
LESVSNFLKDFLHKDRDDVNVEIVFLHNISPNLELEALFKRHFTQVEFYQGSVLNPHDLA
RVKIESADACLILANKYCADPDAEDASNIMRXNKASNTIKNYHPKIRIITQMLQYHNKAH
LLNIPSWNWKEGDDAICLAELKLGFIAQSCLAQGLSTMLANLFSMRSFIKIEEDTWQKYY
LEGVANEMYTEYLSSAFVGMSFPVICELCYVKLKLLLIAIEYKSDQRECSTLINPGNHMK
MQEGTLGFFIASDAKEVKRALFYCKACHDDITDPKRIKKCGCKKSKNSYNGYIKSIEEDQ
QSALSPKKKQRNGGMKNSPNSSPKIMRHDPLLIAGNEQIESMDENVKKYDSTGMFHWCPS
KDIEKVILTRSEAAMTVLSGHVVVCIFGDVKSALIGLRNFVMPLRASNFHYHELKHIVFV
GSLEYLKREWETLHNFPKVSILPGTPLSRADLRAVNINLCDMCVILSANQNNIDDASLQD
KECILASLNIKSMLFDDSIGVLQANSQGFTPPGMDRSSPENSPVHGLVRQTSVTTGANIP
IITELVNDSNVQFLDQDDDDDPDTELYLTQPFACGTAFAVSVLDSLMSATYFNDNILTLI
RTLVTGGATPELEGLLAEENALRGGYSTPQTLANRDRCRVAQLALYDGPFADLGDGGCYG
DLFCKALKTYNMLCFGIYRLRDAHLNSSQSQCTKRYVITNPPYAFELVPSDLIFCLMQFD
HNAGQSRTSLSHSSHSSHSSSKKGSSVHSIPTTNRTNRARNRDSRDKQKKKKRFTDEPEN
THLRTIQIKPVNTLTINQASQRKSSSSLTPPIREVEDEC
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaagagattcaacccggatccttccgtccacatatccaagatgagtgtcatcatc
ccgttttccccagatgtgccctgtgacagcaacggccagcggatgtggtgggctttcctc
gcgtcctccatggtcactttctttgggggtctcttcatcatccttctgtggagaactctc
aaatatctgtggactgtgtgctgccactggaacgccaaaaagaaggaggtccatcggctc
agcacaggcgatggcatcaagcgcaccgacaaggacgacccggcggccagcgaggtgggc
tggatgacctcggtcaaagactgggccggagtcatgatatccgctcagacactgacggga
agagtcctggtggtgctcgtatttgctctcagcattggagcccttgttatatacttcata
gattcttctgatccaatcgagtcctgtcagaacttctacaaagacttcacgttgcagatc
gacatggcgttcaacgtgttcttcttgctgtactttggcctccgtttcattgctgccaat
gacaagctgtggttctggttggaggtgaactcggtggtcgacttcttcacggttcctcca
gtgtttgtgtccgtgtacctgaacaggagctggctcggcttgaggtttttaagggcgtta
aggttgatacagttctcagaaattttacagtttttgaatatactaaagacaagcaactca
ataaagctggtgaacctgtgttcaatcttcataagcacatggctaactgcagcaggattc
attcatttggtggaaaattcaggggatccttgggaaaacttcaaaaattcccaggcactt
tcctactgggaatgtgtctacttactcatggtcactatgtccactgtcggctacggagac
gtttatgcaaaaaccaccctgggccgcctgtttatggtcttcttcatcctcggtggtttg
gccatgtttgcgagctacgtccctgaaatcatagagttaataggaaaccgcaagaaatat
ggtggttcctatagtgcggttaatgggagaaagcacatcgtggtctgtggtcatataaca
cttgagagtgtgtccaactttctaaaagacttcctacacaaggacagggatgatgtcaat
gtagaaattgtttttctccataatatctcccctaatcttgagctggaagccttgttcaag
cgccacttcactcaagtggagttttaccaaggatccgtcctgaacccacacgacctggcc
agagtgaagatcgaatcagctgatgcttgtttgatcttagccaacaaatactgtgctgac
cctgatgctgaggatgcatccaacattatgaggtaaaacaaagcaagtaatactatcaag
aactaccatccaaagatcagaattatcactcaaatgttgcagtaccacaataaggcccac
cttttgaacatcccgagctggaactggaaggagggagatgacgctatttgccttgcggag
cttaagctgggcttcatcgctcagagctgcctggctcagggcctctccaccatgctggcc
aacctattttctatgaggtccttcatcaagattgaggaggacacatggcagaagtattac
ctcgaaggagtagccaatgagatgtatactgagtacctatcgagtgcctttgtgggcatg
tccttccctgtcatttgcgaactctgctacgtgaagctaaagctgctcctgatagctata
gagtataagtctgatcaaagggaatgcagcaccctgataaaccctggaaaccacatgaag
atgcaggaggggacattgggcttcttcattgcaagtgatgccaaagaagtgaagagagcg
ctgttttactgtaaagcctgccacgatgacattactgatcccaaaaggattaagaaatgt
ggatgcaagaaatctaaaaatagctataatggatatatcaaatcaattgaagaggaccaa
cagtctgcgttatcgcccaaaaaaaagcaacgcaacggaggcatgaaaaattctccaaac
tcctcacccaagatcatgagacatgacccgctcctcatcgcggggaacgagcagattgag
agcatggacgagaacgtgaagaaatacgactccacggggatgtttcattggtgcccgtcc
aaagacatcgagaaggtcatcttgacccggagcgaggccgccatgactgttctgagcggt
cacgtggtcgtgtgcatatttggagatgtgaaatctgcgttgatcggtctccggaacttt
gtcatgcctctgagagcgagcaactttcactaccatgagctgaagcacattgtgtttgtc
ggctcactcgagtatctgaaacgggagtgggagacgcttcacaattttccaaaggtctcc
attttacctggcacaccgttgagtcgagcagatctgagggctgtcaacatcaacctctgc
gacatgtgtgtcattctgtcagccaatcagaacaatattgacgatgcatcacttcaggac
aaagaatgcatcttggcgtcactcaacatcaaatccatgctgtttgacgacagcatcggg
gtcttgcaggctaattcccaaggcttcaccccaccaggaatggatagatcctctcctgaa
aacagccccgtccatggattagtgaggcagacttctgtcacaactggagcaaatattccc
atcataacagaactagtaaatgactccaatgttcagttcttggaccaagatgacgatgac
gaccctgacacagagttgtacctcactcaaccttttgcctgtgggacagccttcgccgtc
agtgtgctggattccttaatgagtgctacatacttcaatgataatatcctcaccttgatc
cggacattggtaacaggcggggcgacgccggagctggaggggctgctggccgaggagaat
gcgttacggggcggctacagcacgccacagacgctggcgaacagggacaggtgtcgcgtg
gcacagctggccctgtacgacgggcccttcgccgacctcggggatggcggttgctatggt
gacctgttttgtaaagccctgaaaacatacaacatgttgtgctttggcatctatcggtta
cgagacgcacatctaaacagcagccaaagccaatgtaccaaacggtatgtcataaccaat
ccaccatatgcttttgagctggtgccctcagacctgatattctgcctgatgcagtttgac
cacaacgctggccagtctcgaaccagtctctcccactcttcccattcgtcccattcctcc
agcaaaaagggctcctctgtccactccatcccaaccaccaaccgcaccaaccgggcccga
aacagagactcacgagacaaacaaaagaaaaaaaagaggtttacagatgagccagagaat
acccacctgaggaccatacagatcaagcctgtgaatacgctcaccatcaaccaagccagt
cagcgtaaatcctctagcagcttgactccacccatcagagaagtagaagacgagtgctga
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