Cyclopterus lumpus (lumpfish): 117748684
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Entry
117748684 CDS
T09199
Symbol
itgb4
Name
(RefSeq) integrin beta-4 isoform X1
KO
K06525
integrin beta 4
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04510
Focal adhesion
clum04512
ECM-receptor interaction
clum04810
Regulation of actin cytoskeleton
clum04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
117748684 (itgb4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
117748684 (itgb4)
09142 Cell motility
04820 Cytoskeleton in muscle cells
117748684 (itgb4)
04810 Regulation of actin cytoskeleton
117748684 (itgb4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
clum04147
]
117748684 (itgb4)
04515 Cell adhesion molecules [BR:
clum04515
]
117748684 (itgb4)
04090 CD molecules [BR:
clum04090
]
117748684 (itgb4)
Exosome [BR:
clum04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
117748684 (itgb4)
Exosomal proteins of bladder cancer cells
117748684 (itgb4)
Cell adhesion molecules [BR:
clum04515
]
Integrins
Integrin beta subunits
117748684 (itgb4)
CD molecules [BR:
clum04090
]
Proteins
117748684 (itgb4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
fn3
Calx-beta
Integrin_B_tail
Pur_ac_phosph_N
I-EGF_1
EGF_2
SEA
Motif
Other DBs
NCBI-GeneID:
117748684
NCBI-ProteinID:
XP_034414561
Ensembl:
ENSCLMG00005019684
LinkDB
All DBs
Position
19:3955744..3975577
Genome browser
AA seq
1990 aa
AA seq
DB search
MGRWTLHLSVGLGLLAVLLTCCDAEANHCFAARAKTCSECLQTEVGCAYCTNENFNGPRC
DLFENILAHGCRREDILRAQSTLSLETKQAINMNLQKSQVSPQKMVMSFLPGEQKQMNVE
VFAPTKGPLDLYILMDFSNSMEDDLDNLKKMGSQLAKLVNDLSDDPTIGFGKFVDKVTDP
QTDMRQAKLKQPWPNSDPPFSFQNVIPLMNNTDSFIRKLQKEKISGNLDAPEGGFDAILQ
AAVCVDKIGWRSSSTHLLVFSTESAFHYESDGANVLAGIMARNDEACHLDPQGKYTKDVD
QDYPSIPTLVRLLAKHNIIPIFAVTNHSYSFYEKLQTYFPIAEIGRLEEDSKNMLTLMRT
AFESIRSKMSIRAEDRPKAFEAEFFHTNGSLAQYGAFDFKPGAIGKFKMRLKAQRTIDGQ
PVCQMDPDHKMGTMRVKPTTFSTAVKVNASVLCPTCPCEKTAIPNADKCYGNGDLVCGRC
HCHDGWLSTFCNCSASSSAQDKNQCMGSGIKEPCSGNGECLECGTCLCNNPDQFEGQYCQ
YDKTQCQRYGGFLCNDRGSCIMGRCVCTKGWTGNACECPKSNQTCLDSKGGLCNGRGKCV
CGRCACYSSDMTKTATCEPNFQAQLGACEGTRSCVQCQAWKTGEKKEKEECDKCSFKIIL
VDELKEEEKVLDSCSFRDEDDDCTYYYTVENPKDPGDNDLEVQVLKKKDCPPASFLWLLP
LLLFLLLLLALLLLCCWKYCACCKTCFQSCLALLPCCRRGRMVGFKEDEYLLRQSLLTSD
HLDTPMVRTGPPKGTDVVRWKVTDNVHRSPNHPQALIKPNPKETIQFPMSLRLNRVFSEN
LSRPESRDAEQLRKEVADNLNEVYKQIPGAQKVQKTSFRMQRNAGKRQDYAIMDTVLPAP
RSSYPDIVKLTEKNVQSGNVNNLKVVPGYYTVATDREAAGAIEFNEGVESVDVHVPLFVK
DEDDDKKQLLVEAMDVPLGIAEIGKRLVNITIIKEHATSVFSFLQPAYTYSRQDGVANIP
ISREIIEDGRTQVTYRTRDLTAKDKKDYVAMEGDLTYNPDETQKMVPVRLLELSEKDGLL
EDKQVKQFVMDLSNPRQGAKLGRYPRTTVTITDQPEPSVMMFKKGAQNFGTSDPTYTIPV
VRTRNQDSPATVKWRTKKAQRFELSGPLKFSPGETEKNIVIDPWAHPGPIQPETIQLELF
DPSSNATIGDRKTTLVNVVDGGEIAQMQQMGFVNPKTMSPGGRLLAPTNLKAKATGPRNI
RLNWDPASGNPMGYKVKYWIYGDPEKNAQILDVKTPQAELTNLYPFCDYEMKVCSYNTMG
DGQDTDMVTCQTLEDAPGEPGRLAFNVISPTVTQVSWGEPAETNGNITAYEVIYTPIDDV
LKPVGAAKKVKIDNPKKRMLLIENLQSAQTYQYKVRAMNSIGWGPFRNATINLASQPTRP
MSIPIIPDIPIVDAEAGDEYDSYLMYSNEVLKSPTGSKTPSVSGDGWKYVKLVGSKLDLR
KVSWLDVISSRLSTDTETSSDEAPHPGYAKTPLPADYTMNGKWDQNFLFPGGSGTRNLST
SSSPMSTLNSNYRGAGSSSFLTDTTTTYMSGSGGSRRTEMIEGGVHTSEVIMRKRSEIRG
YADENIRDSIVMGDVPSMFPDLGGFGYTGTQSSSQSQFSYNMSTGSSARNQSSDVNDALY
NLDRVLQDSPLSPGVPDTPSRLVFSALGPTALKVSWQEPRCDKDILGYCVLYQLLNGGEG
KRINVTNPAENSVIIEDLLPNHSYLFKVKAQSQKGWGPEREGVITIESAVDPKSPLSPMP
GSPFTLSTPSAPGPLVFTALSPESLQLSWEQPRKPNGDILGYIVTCEQLHGGGDVRSFEV
NGDSAETSLTVPNLTENVPYKFKVQARTTQGFGPEREGIITIESQDGSTLSQYNSQAMSS
REVFQSPAEVNTRTNVSHTMIHDPFFSDGTMMTTQHTETSGMVTRQVTKEVVQRSVMGGT
TVTKKMFYES
NT seq
5973 nt
NT seq
+upstream
nt +downstream
nt
atggggagatggacgctgcatctctccgtggggctcgggctcctcgccgtcttgttgacc
tgctgtgatgctgaagcgaaccactgcttcgctgccagggccaagacctgttcagaatgc
ctgcagacggaggtcggctgtgcctactgcactaatgagaactttaatggccctcgctgt
gacctgttcgaaaacatattagcccacggctgcaggcgagaagacatactccgagctcag
agcaccctgtcgttagaaaccaagcaagccatcaacatgaatcttcagaagtctcaggtg
tctccacagaagatggtcatgagctttctgccaggagagcagaagcagatgaatgtggag
gtgttcgctcccaccaaaggccccctggacctttatattctgatggacttctccaactcc
atggaggacgatttggacaacttgaagaagatgggctcgcagctggctaagttggtgaac
gacctgtcagatgatcccaccatcgggtttggaaagtttgtggacaaagtgaccgacccc
cagacggacatgagacaagccaaacttaaacagccgtggcccaacagcgacccgccgttc
tctttccaaaacgtcatcccgttgatgaacaacacagattccttcatccggaagctccag
aaggagaaaatatctggcaacctggatgctcctgaaggaggctttgatgccatactgcag
gctgcagtttgtgtggacaagatcggctggcgtagcagcagcacgcatctcctggttttc
tccaccgagtcagccttccactacgagtccgacggcgccaacgtgctggcgggaatcatg
gcgcgcaacgatgaggcctgccacctcgacccacaaggcaaatacacaaaggatgtagac
caggattacccttcaatacccacactggtccgcctgctagccaaacacaacatcatcccc
atcttcgctgtcaccaaccactcctactcgttttacgagaaactccaaacgtacttcccc
attgcggaaatcggtcggctggaagaagactcaaagaacatgctgacactcatgaggact
gccttcgagagcatccgaagtaagatgagcatccgcgcagaggacagacccaaggctttt
gaggcagagttctttcacaccaatggaagccttgcacaatacggggcctttgacttcaag
cctggcgcaataggcaagttcaagatgcgactcaaagcccagcgaacgatcgatgggcaa
cctgtctgtcagatggatccggaccacaaaatgggaacaatgagagtcaaacctacaacc
ttcagcactgccgtcaaagttaatgcctcggttttgtgtccaacctgcccctgtgagaag
acggccatccctaatgcagacaagtgctatggcaacggagaccttgtgtgtgggaggtgt
cactgccatgatggctggttgagtaccttctgtaactgctcagcaagttcttcagctcag
gacaagaaccaatgtatgggctcgggaataaaggaaccatgttcaggcaatggggagtgc
ctggagtgtggaacctgtctgtgcaacaacccggatcagtttgagggtcaatactgtcag
tacgacaagacccaatgtcaaagatatggcggcttcctctgcaatgaccgcggctcttgt
atcatgggtcggtgtgtgtgcaccaaaggctggacgggcaatgcctgcgagtgtcccaag
agcaaccagacctgtctggacagcaagggcgggctctgcaacgggcgagggaaatgtgtc
tgcggccgctgtgcgtgttacagctctgatatgacaaagactgcaacctgtgagcccaat
ttccaggcccagttgggcgcgtgcgaggggacgaggtcttgcgtccagtgtcaggcctgg
aagacaggagaaaagaaagagaaagaggaatgtgacaagtgctccttcaaaattatcttg
gtggatgagctcaaagaagaggagaaagttcttgattcgtgcagtttccgcgacgaggat
gacgactgtacgtactactacactgtcgaaaaccccaaagatcccggagataacgacctg
gaggtccaggtgctcaaaaagaaagattgcccccccgccagcttcctgtggctgctccca
ctcctcttgttcctcttgttgctgctggctcttctgctgctctgctgctggaaatactgc
gcctgctgcaaaacctgcttccagagctgtcttgccctgctgccttgctgccggagaggt
cgcatggttggcttcaaggaagatgagtatttgctccgccagtctctgctcacctcagac
catctggacacaccaatggtgaggaccggcccacccaaaggaacagatgtggttcgctgg
aaggtcacagataacgttcaccgatcgcccaatcacccccaggctctgataaagcccaac
cccaaagagaccatccagttcccgatgtctctccggctaaacagggtgttctctgagaat
ctgtctcgtcccgaatccagagatgccgaacagctccgcaaggaagttgccgataatcta
aatgaggtgtacaagcagatcccaggagcccagaaggtgcagaaaacctctttcagaatg
cagagaaatgccggaaaaaggcaggactacgccatcatggacaccgtcctacctgctcct
cgcagcagctaccccgatatcgtcaaactcaccgagaaaaatgtccagtctggaaacgta
aataatctcaaagtggtgcccggctactacactgtggccacagaccgagaggctgcagga
gccatagagttcaatgaaggtgtggagtcggtagacgtccacgtgccgctctttgtcaag
gatgaagacgatgacaagaagcagctgctggtggaggccatggatgtgccactgggcatc
gctgagattggaaaacgtctggtcaacatcaccatcatcaaagagcatgccaccagtgtc
ttctcgttcctccagccggcctacacctacagcaggcaggacggagtggccaacatccca
atcagcagagagatcatagaagatggacgcacacaggtcacctaccgcacacgggacctt
acagccaaggataagaaggactacgtggctatggaaggagacctgacctataatcctgat
gagacccagaaaatggtgcctgttcgtctgctggagctgagcgagaaagatggcctcctg
gaagacaaacaggtcaagcagtttgtcatggatctcagcaacccgcggcagggcgccaag
ttgggacgctacccaagaactactgtcactatcacagaccagccagagcccagtgtgatg
atgtttaaaaagggcgcccagaacttcggcacatctgacccaacctacaccatcccagtg
gtccgcactcgcaaccaggacagccccgccacagtgaaatggcgcaccaagaaggcccag
cgctttgaattgtccggccctctgaagtttagtcctggagagacggagaagaacattgtg
atcgacccatgggcccaccctggcccaatccagccagagaccatccaactggagctgttt
gacccaagtagcaatgctactatcggagacaggaagaccacccttgtcaatgttgttgat
ggaggagagattgcccagatgcagcagatgggcttcgtaaacccgaaaaccatgtcccct
ggcgggcgccttctcgccccaacaaaccttaaggccaaagcaactggacccagaaacatc
cgcctcaactgggacccggcatctggtaaccccatggggtacaaggtaaagtattggatc
tatggcgacccagagaaaaatgcccagatcttagatgtgaagactcctcaagctgagttg
accaacctgtaccccttttgtgactacgaaatgaaagtgtgcagctacaacacaatggga
gatggccaagatacagacatggttacgtgccaaactcttgaggatgcgcctggtgaacct
ggacgtctggcctttaatgtcatcagtccgactgtcactcaggtcagctggggagagcct
gcagagaccaatggcaacattacggcttacgaggtcatttacacacccattgatgacgta
ctgaagccggtgggcgctgcgaagaaagtaaagatcgataaccccaagaagcggatgctg
ttgatcgagaacctccaaagcgctcagacctaccagtacaaggtccgtgccatgaacagc
ataggctggggccccttcagaaatgccaccatcaacctggcatcacagcctaccagaccc
atgtccattcccatcattccagatatccctattgtggatgcagaggccggagacgagtat
gacagctacctgatgtacagcaatgaggtgctaaagtcccccacaggctccaagacaccc
agcgtctctggtgatggctggaaatatgtcaagttggtggggtccaaactggatctccgt
aaggtgtcgtggttggacgtcatctccagtcggctcagcacagacacagagacgagctca
gacgaggccccccaccccggctacgccaaaacgcccctgccagcagattacacgatgaat
gggaaatgggaccagaacttcctcttcccggggggatcagggacccgcaacttgtctaca
tcgtcctctccaatgtccaccctgaactcaaactacagaggggcaggcagctcctctttt
ctcaccgacacaaccaccacctacatgtcgggatcaggaggctctcgcagaaccgagatg
atcgaaggaggggtacacacatcggaggtcatcatgagaaagcgctcagagatccggggt
tacgcagacgaaaacatccgagactctatcgtcatgggagacgttccaagcatgttccca
gatctaggtgggttcggctacactgggacgcagagcagctctcagagccagttcagctac
aacatgtcgacaggctcgagtgccaggaaccagtcgtcagacgtcaatgacgccctatac
aatctggacagggtgctccaggattctccactgtctccgggtgtaccagacacccccagc
cgactggtgttttctgctctcggccccaccgccctgaaggtcagctggcaggagccccgc
tgtgacaaagacatcctgggctactgtgttctctaccagctgctcaatggaggcgagggg
aagcgtattaatgtgacaaacccggccgagaactctgtgatcatcgaggaccttctgccc
aaccactcctacctgtttaaggtgaaggctcagagccagaagggctggggtccagagaga
gagggggtcatcaccatcgagtccgctgtggaccctaagagtcccctgagcccgatgcca
ggctcgccgtttactctgagcactcccagtgccccgggccccctggtcttcactgcactg
agcccagaatccctgcagctcagctgggagcagccccgtaaacccaacggagacatcctg
ggatatatagtcacctgtgaacagctgcacggtggaggagacgtacgttccttcgaggtg
aacggggacagcgccgagaccagtctgaccgtaccgaacctgactgagaacgttccctac
aagttcaaagttcaggctcgaaccacacagggcttcggtcctgagagggagggcatcatc
accatcgagtctcaggacggcagcactttgtctcagtacaacagccaagcgatgtcgagt
agggaggttttccagtcgccagcagaggtcaacacgcggaccaacgtctcccacaccatg
atccacgaccccttcttctcagatggcacgatgatgaccacgcagcacacagagaccagc
ggcatggtgacccgtcaggtcaccaaggaagtggttcagaggagcgtcatgggagggacc
acggtcacaaagaagatgttttacgaatcgtaa
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integrated database retrieval system
