Cyclopterus lumpus (lumpfish): 117748693
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Entry
117748693 CDS
T09199
Symbol
celf1
Name
(RefSeq) CUGBP Elav-like family member 1 isoform X1
KO
K13207
CUG-BP- and ETR3-like factor
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
clum03041
]
117748693 (celf1)
Spliceosome [BR:
clum03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
117748693 (celf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RNA_bind
RRM_7
New_glue
Motif
Other DBs
NCBI-GeneID:
117748693
NCBI-ProteinID:
XP_034414585
Ensembl:
ENSCLMG00005000722
LinkDB
All DBs
Position
3:2177863..2202259
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AA seq
521 aa
AA seq
DB search
MDSLDPETLYVSPEQTGQTTLPLCTSEVSNLALVGGKKMNGSLDHPDQPDVDAIKMFVGQ
IPRSWSEEQLRELFEPYGAVYEINVLRDRSQNPPQSKGCCFITYYTRKSALEAQNALHNM
KILPGMHHPIQMKPADSEKNNAVEDRKLFIGMISKKCNENDIRMMFSPYGQIEECRILRG
PDGLSRGCAFVTFTARQMAQSAIKSMHQSQTMEGCSSPIVVKFADTQKDKEQKRMAQQLQ
QQMQQLSAASMWGNLTGLNSLGPQYLALYLQLLQQSASTGNALSNLHPVSGLNAMQNLAA
LAAAATATQATPTGSSAMTTSSSPLSALTSSGSSPNSSSNSSVNPMASLGALQSLAASAG
AGLNMGSLAGMAALNGSLGSGGLSNGSGNTMEALSQAYSGIQQYAAAALPSLYNQSLLSQ
QSVSAAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVISAKVFIDKQTNLSKCFG
FVSYDNPVSSQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atggatagcctggaccctgaaaccctgtatgtctctccagagcagactgggcagaccacc
ctaccgctctgcacctcggaggtctccaacttggccctagtgggtgggaagaagatgaat
gggtctctggaccacccggaccaaccagatgttgatgccattaagatgtttgtgggacag
attccgcggtcctggtccgaggagcagcttcgtgagctgtttgagccttatggagcagtc
tatgagataaatgtcctccgagaccgcagtcagaatccaccacagagcaaaggctgctgt
tttataacgtactatactcgcaaatctgcattggaagcccagaatgcgctgcacaacatg
aagattctgccagggatgcaccatccaatccagatgaagccagctgacagtgagaaaaac
aatgcagtggaggacaggaagctgttcattggaatgatctccaagaagtgtaacgagaat
gacatccgaatgatgttctcaccatacggacagatagaggagtgccggatccttcgaggc
cctgatggactcagtcgtggttgtgcatttgtgacattcacagctcgacaaatggcccag
tcagccatcaaatccatgcaccagtcccaaaccatggagggctgttcctcgccgattgtg
gtgaagtttgcagacactcagaaggacaaggagcagaagcgtatggcccaacagctgcag
cagcagatgcagcagctcagtgctgcttccatgtgggggaatctcactgggctgaacagc
ctggggccgcagtatctagcactctacttacagttgctgcagcagtcggcctcaacaggg
aatgcactgagcaacctgcaccctgtttcaggtcttaatgccatgcagaacctggctgct
ttagcagcggcagcaactgccacacaggccacgcccacaggctccagcgccatgacaaca
tctagtagcccactcagtgcactaacaagctcaggctcctcccccaactccagcagcaac
tcctcagtgaaccccatggcttctttgggggccctgcagtctctggctgcgagtgctgga
gctggcctcaacatgggctccctggcaggcatggcagcactgaatggcagccttggctcc
ggaggcctgtccaatggatcaggaaacaccatggaggcactgagccaggcctactcgggc
atccagcagtatgctgctgctgccctccccagcctgtacaaccagagcctgctgtctcag
cagagcgtctcagccgcaggcagccaaaaggaaggtccagaaggtgccaacctgttcatt
taccacctgccccaggagtttggagaccaggacctgctccaaatgtttatgccctttggg
aatgtcatctctgctaaagtcttcattgacaaacagacaaacctcagcaagtgttttggc
tttgtgagctatgacaaccccgtgtcatcacaggcagccatccagtcaatgaatgggttc
caaatcggtatgaagaggctgaaggtgcagctgaagcgctcaaagaatgacagcaagcct
tactga
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