Cyclopterus lumpus (lumpfish): 117748694
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Entry
117748694 CDS
T09199
Symbol
rhbdl1
Name
(RefSeq) rhomboid-related protein 1 isoform X1
KO
K02857
rhomboid-related protein 1/2/3 [EC:
3.4.21.105
]
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
clum01002
]
117748694 (rhbdl1)
Enzymes [BR:
clum01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.105 rhomboid protease
117748694 (rhbdl1)
Peptidases and inhibitors [BR:
clum01002
]
Serine peptidases
Family S54: Rhomboid family
117748694 (rhbdl1)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rhomboid
EF-hand_7
DUF5580_M
DUF5580
Motif
Other DBs
NCBI-GeneID:
117748694
NCBI-ProteinID:
XP_034414582
Ensembl:
ENSCLMG00005009275
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All DBs
Position
19:complement(8226726..8260170)
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AA seq
379 aa
AA seq
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MDRSSLFQLIQEQCGLLFFQLDPDNTGFIAVENFTSLVEHHELQLDPSKLDMLLALVHSN
EEGQVCYQELIELMSSKRSSSFRRAIANGRRTLQREILLDETGLGLYKRFVRYVAYEILP
CETDRRWYFHQNRLCPPPVFIAIVTIVQIIVFMCYGIMLNKWVLQTYQPDFMKSPLVYHP
GHRAQVWRFFSYMFMHVGLEQLGFNALLQLMIGVPLEMVHGILRISLLYMAGVLAGSLTV
SITDMRAPVVGGSGGVYALCSAHLANVVMNWAGMRCPYKLLRMILALVCMSSEVGRAVWL
RFSPQLPSSGPQPSFMAHLSGAVVGISMGLLILRSYEESLQKQCSWWVIVFSFITFLLFA
IFWNIFAYELLGVQIPPPP
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atggatagaagctccctgtttcagctcatacaagagcagtgtgggctgttgtttttccag
ctggacccagacaacaccggtttcatcgcagtggagaacttcaccagcttggtggagcac
catgagctgcagctggacccgtccaaactggacatgctgctagccctggtccatagcaat
gaagagggacaggtgtgctaccaggagctcatcgagctgatgagcagtaaacgctccagc
agcttccgacgggccattgctaatggccgccgcacgctgcaaagggagatcctgctggat
gagacgggactgggtctgtacaaacgttttgttcgctatgtggcttacgagatcctgccc
tgcgagacagaccgacgctggtacttccaccagaaccgcctgtgtcccccacctgtcttc
atcgccatcgtcaccatcgtccagattatcgtgttcatgtgctacggcatcatgctaaac
aagtgggtactgcagacatatcagcccgacttcatgaagagccccctagtctaccatccg
ggccaccgtgcacaagtgtggcgcttcttcagctacatgttcatgcacgtcggtttagag
cagctcgggttcaatgctttactgcagctgatgattggtgttcctttggagatggtccat
ggcatcttacgaataagtctgctttacatggcaggagtgctggccggctcgctgacagtg
tccatcaccgacatgcgtgctccagtggtggggggctccggaggggtctacgctctgtgc
tcagcgcatctggccaacgttgtcatgaactgggccgggatgcgttgtccatacaagctg
ctccgcatgatcctggcgctggtttgcatgagttcagaggtgggtcgtgcagtctggctt
cgcttctcaccgcagctgccatcctcggggccccagcccagcttcatggcacacctatcg
ggggctgtggtcggtatcagcatggggcttttgattctgcgcagctacgaggagagtctg
cagaaacagtgctcctggtgggtcattgtcttctccttcatcacctttctcctcttcgcc
atcttctggaacatctttgcatatgagctgctgggggtgcagataccgcctcctccctga
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