Cyclopterus lumpus (lumpfish): 117748748
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Entry
117748748 CDS
T09199
Symbol
stx4
Name
(RefSeq) syntaxin-4
KO
K13502
syntaxin 4
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
117748748 (stx4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
clum04131
]
117748748 (stx4)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
clum04147
]
117748748 (stx4)
Membrane trafficking [BR:
clum04131
]
SNARE
Syntaxin (Qa)
Stx-PM
117748748 (stx4)
Exosome [BR:
clum04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
117748748 (stx4)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntaxin
SNARE
Syntaxin_2
DUF16
Mod_r
K-box
DUF6584
Lzipper-MIP1
TPR
PTX3_N
Orf78
STX6_10_61_N
DUF5345
Herpes_US9
Motif
Other DBs
NCBI-GeneID:
117748748
NCBI-ProteinID:
XP_034414693
Ensembl:
ENSCLMG00005023016
UniProt:
A0A8C3B1M1
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All DBs
Position
19:complement(16888913..16896107)
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AA seq
298 aa
AA seq
DB search
MRDRTKELGNNADASDEDEEGKPLVIKPGTSLAKEEKENDAFFKKVQEIHEGLQHLKRMV
SNLENKQKAVLGEPLPEESMKKELQTLREEIKTLATQIHKKLKSIEPKKGGDDDGKYVPI
NVRMQRTQHGVLSKEFVELMGHCSTIQSQYRDRNVERIRRQLKITETNMTDDQLDSMLES
GETNVFIKNILIDAQATKQALNEIETRHDEILKLEQSIRDLHEMFQYLAMEVEAQGEMVN
QIENNIKQSSNYVEKAKEDTTAAVTYQQKARKKKLWIAICLAILILILVIALVSAFGT
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgcgggaccgaactaaagaactggggaacaatgcagacgcgtcagacgaggacgaggag
ggcaaacctctggtgatcaaaccgggaacgtctttggcaaaagaggagaaggagaatgac
gctttctttaaaaaggtgcaagaaatccacgaaggtctccaacacctcaagaggatggtg
tccaacctggagaacaagcagaaggccgtgctgggggaaccgctgccggaggagagtatg
aagaaagagctccagactcttcgagaggagatcaaaacgttggcgactcagatccacaag
aagctcaagagtattgaaccgaagaagggaggcgacgacgacggaaagtacgttcccatc
aacgttcggatgcagcggactcagcacggcgtgttgtccaaggagttcgtggagctgatg
ggtcactgcagcaccatccagtctcagtaccgagaccgcaacgtggagcggatacggagg
cagctcaaaatcactgagaccaacatgacggacgaccagctggattcgatgctggagagc
ggcgagacgaacgtgttcatcaagaacatcctgatcgacgctcaggccaccaagcaggct
ctgaacgagatcgagacccggcacgacgagatcctgaagctggagcagagcatccgagac
ctgcacgaaatgttccagtacctggccatggaggtggaggcgcagggcgagatggtgaac
caaatcgaaaacaacatcaaacagtcgtccaactacgtggagaaggcgaaggaggacacg
acggcggcggtcacgtatcagcagaaagctcgcaagaagaagttgtggatcgcgatctgt
ctggccatcctcatcctcatcctcgtcatcgctttggtcagcgccttcggcacctga
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integrated database retrieval system