Cyclopterus lumpus (lumpfish): 117748764
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Entry
117748764 CDS
T09199
Name
(RefSeq) leucine-rich repeat-containing protein 4B-like
KO
K16360
netrin-G3 ligand
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
117748764
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
clum04515
]
117748764
Cell adhesion molecules [BR:
clum04515
]
Immunoglobulin superfamily
NGL family
117748764
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_1
ig
LRR_9
LRR_14
V-set
Ig_2
LRRNT
Ig_6
DUF7617
LRR_NXF1-5
Big_6
Pam3_Gp34
Motif
Other DBs
NCBI-GeneID:
117748764
NCBI-ProteinID:
XP_034414713
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All DBs
Position
19:8984599..8988141
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AA seq
740 aa
AA seq
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MRVVMVTSPCTPSPLLWLVQLLLWFHNHGPQLTEAAPPCPTPCTCSNQASRVICTRKSLE
QVPDSISENTRYLNLQENTIQVIKSDTFKHLRHLEILQLSKNHIRQIEVGAFNGLPNLNT
LELFDNRLTVVPSQAFEYLSKLRELWLRNNPIETLPAFAFHRVPSLRRLDLGELRKLDFI
SEAAFEGLVNLRFLNLGMCGLKDIPNLTPLVRLEELELSGNQLGIVRPGSFQGLVSLRKL
WLMHSRVSVIERNAFDDLKNLEELNLSHNSLHSLPHDLFTPLHQLERVHLNHNPWVCNCD
VLWLSWWLKETVPSNTTCCARCHAPPGIKGKYIGELDQSHFTCYAPVIVEPPTDLNVTEG
MAAELKCRTGTSMTSVNWFTPNGTLMTHGSYRVRISVLHDGTLNFTNVTVQDTGQYTCMV
TNSAGNTTATAVLNVSASDPSNSYSYFTTVTVETVDTVRGEEENSARQYINETFIEFPNP
TVQRGVIEGRPGITISPLSSLSSLSPRAENAVTVSIMDVTNIPGLDDVMKTTKIIIGCFV
AITFMAAVMLVAFYKLRKQHQLHKHHGPARAIEIVNVEDEIGAGAGSGISGGSTMNSGSG
EGTLRMHHPEMVNLPNIGRTDTLNHYYKTHHFNNNVMGLSIGSDGMGPGMILNSKNQQIH
DMPISCTSVPISTSNLLSSSGNGTNLNPCSMSPPMPMSLPMPTMGLHGSIKGFMSQNQNP
QMEPLLFKGNSKENVQETQI
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgttgtcatggtgaccagcccctgtaccccttcccccctcctctggttggtccag
cttttgttgtggtttcacaaccatggaccacagctgacagaggcagcacccccatgcccc
accccctgtacctgctccaatcaggcgagccgtgtcatctgtacaaggaagagtttagaa
caagtccctgacagtatttcagagaacacaagatacctcaatctacaagagaacacaatc
caggtgatcaagtctgacacattcaaacacctgcggcatttggaaatcctccagctctcc
aagaaccacatccggcaaattgaggtgggagctttcaatggccttcccaacctcaacacg
ctggagctttttgacaaccgtcttacagtggtaccgtcacaagcctttgagtacctcagc
aagctaagggaactatggctacgaaacaaccccatcgagacactgccggcgtttgccttt
caccgtgttccctcattacgccgtctcgatctcggggaactcaggaagctggatttcatc
tcagaggctgctttcgaaggtctggtcaacttgcgcttcttgaatcttggcatgtgcggt
ttgaaggatatccctaacctcaccccactagtacgactagaggagttggagctgtcaggg
aaccagctggggatagtcaggcctggatccttccagggcctagtgtcgcttcgcaagctg
tggctaatgcactccagggtgtcagtcattgaacgcaatgcttttgatgacctcaaaaat
ttggaggagctcaacctctcccacaactccctgcattccctgccccatgaccttttcacc
cctttgcaccagttggagagggtgcatctaaaccacaacccttgggtgtgcaactgtgat
gtcctgtggctcagctggtggctgaaagaaacagttcccagcaacaccacgtgctgtgct
cgatgccacgcgcccccaggtataaaaggcaaatacattggggaactcgaccagagccac
ttcacctgctatgccccagtgattgttgagccacccactgacctcaatgtcactgagggc
atggctgctgagctgaaatgtcgtactggaacctcgatgacctccgtgaattggtttact
ccgaatggcactctgatgacccatggatcataccgagttaggatctcagtgcttcatgac
ggaacactgaacttcacaaacgtgaccgtgcaagacacagggcagtacacttgcatggta
accaactccgcgggaaacaccactgcgaccgccgtgctcaatgtgtctgcttcagacccc
agcaacagctacagctatttcaccaccgtcactgtggaaacagtggatacagtgagagga
gaagaggaaaactcagcaagacagtatattaacgaaaccttcatagaatttcctaatcct
actgttcaaagaggagtaatagagggccgacctggcataactatatcacctctctcctct
ctttcctcactgtccccacgagctgaaaatgcagtgactgtgtccataatggatgtaact
aacattccaggcctagatgatgtaatgaaaacaactaagatcatcattggttgcttcgtg
gccattacctttatggcagctgtaatgttggttgcattttataaactgcgtaagcagcac
cagctacacaagcatcacggccctgccagagccatcgagattgtcaacgtagaagacgag
attggagccggggctggtagtggcatctcaggcggttcaacaatgaattctggcagtgga
gaaggaaccctgaggatgcatcatccagaaatggtcaacctccccaacattggtcgtaca
gatactctcaaccattactacaagacccaccatttcaacaacaacgtgatgggcctcagt
atcggctccgatgggatgggaccaggaatgatcctcaatagcaagaaccagcaaatccac
gatatgcccatctcctgtacctcagttccaatctctacgtccaatttgctctcctcatcc
ggcaatggcaccaacctcaacccctgttctatgtccccaccgatgccaatgtctctcccc
atgcctaccatgggcttacacggatcgatcaagggtttcatgagccaaaaccagaatccc
caaatggagccacttctcttcaaggggaactcgaaggaaaacgtccaagagactcagatc
taa
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