Cyclopterus lumpus (lumpfish): 117748866
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Entry
117748866 CDS
T09199
Name
(RefSeq) Usher syndrome type-1G protein homolog
KO
K21878
Usher syndrome type-1G protein
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
clum03037
]
117748866
Cilium and associated proteins [BR:
clum03037
]
Primary cilia and associated proteins
USH complex and associated proteins
117748866
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank_4
Ank
Ank_3
SAM_1
Ank_5
SAM_2
DUF4692
Motif
Other DBs
NCBI-GeneID:
117748866
NCBI-ProteinID:
XP_034414872
Ensembl:
ENSCLMG00005002156
LinkDB
All DBs
Position
19:complement(17194692..17198721)
Genome browser
AA seq
477 aa
AA seq
DB search
MDDRCHRAARDGYLDALKDATRKELNAPDEDGMTPTLWAAYRGNLDALRLIVGRGGDPDR
CDIWGNAPLHLAAANGHHRCLSFLVAFGANAWCLDNDYHAPLDMAAAKGHTDCVRYLDSV
AAKQVALDPKRVGKLKDRAFRAAERRIRDCAELQRKHREHMERKFTKESADLDDSDAMSF
SSYTSGSTLSRTFNTVTSNMPYSQATLQSTAKGKAKIQKKLEKKKQVDGTFKIYEDGRKS
VRSLSGLQLGNDVMFLKRGTYANPRERPRLDIRDMFPRDADGYADADGVSHAMSDPGLHE
AACSEVSADSGRDSLFTRPGLGTMVFRRNYLSAFGTGPREEGSVVGSEPAGRAPNVRLRG
LLPRHSPNFDEDSVGSAVSLRDRNLQEFPWEEAEVGLEEDSEPENSPLETFLASQGLSEF
MPSFRREKIDLEALLLCSDRDLASIHVPLGPRKKLLDARKRRLDAMDEPEAIGDTEL
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atggacgaccggtgccaccgggcggctcgggacggctacctggacgcgctgaaggacgcc
acgcggaaggagctgaacgccccggatgaggacgggatgacgccgaccttgtgggccgcg
taccggggcaacctggacgcgctgcggctcatcgtggggagaggaggcgacccggaccgg
tgtgacatctggggcaacgcgccgctccacctggcggccgccaacggccaccaccgctgc
ctgtccttcctggtggccttcggcgccaacgcgtggtgcctggacaacgactaccacgcg
ccgctggacatggccgccgccaagggccacacggactgcgtccgctacctggactccgtc
gccgccaagcaggtcgccctcgaccccaagcgggtcggcaagctcaaggaccgggcgttc
cgcgccgccgagcgccggatcagagactgcgccgagctccagaggaagcaccgcgaacac
atggagaggaagttcacgaaggagtcggcggatttggacgactctgacgcgatgagcttc
tccagctacaccagcggcagcacgctgagccgcacgttcaacaccgtcacctccaacatg
ccatactcgcaggccaccttgcagtccaccgccaagggcaaggccaagatccagaagaag
ctggagaagaagaagcaggtcgacggaacgttcaagatctacgaggacggcaggaaaagc
gtgcgctcgctgtccggcctgcagctcggcaacgacgtcatgttcctgaagcgcggcacg
tacgccaacccccgggagcggccgcgcctcgacatccgcgacatgttcccccgcgacgcc
gacggttacgccgacgccgacggcgtctcccatgccatgagcgacccgggcctccacgag
gccgcgtgttcggaggtcagcgccgactccgggcgcgattccctgttcacccgacccggc
ctcggcaccatggtgttcaggaggaactacctgagcgcgtttggtacggggcctcgggag
gaagggagcgtcgtggggagcgaacccgccggccgggcgcccaacgtccgcctacgggga
cttctgcctcgccactcgccgaacttcgatgaggacagcgtgggcagcgccgtgagcctg
cgggacaggaacctgcaggagtttccctgggaggaggcggaggtcgggttggaggaggac
tcggagccagagaacagtcctctggagaccttcctggcctcccagggcctcagcgagttc
atgccgagcttcaggagggagaagatcgacctggaggctctgctgctctgttcggatcgg
gacctcgccagcatccacgtccctctgggacccaggaagaagcttctggacgcccgcaag
agacgactggacgccatggacgaaccggaggccattggagacactgagctctga
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