Cyclopterus lumpus (lumpfish): 117748962
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Entry
117748962 CDS
T09199
Symbol
epas1a
Name
(RefSeq) endothelial PAS domain-containing protein 1
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04137
Mitophagy - animal
clum04140
Autophagy - animal
clum04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
117748962 (epas1a)
04137 Mitophagy - animal
117748962 (epas1a)
04148 Efferocytosis
117748962 (epas1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
clum03000
]
117748962 (epas1a)
Transcription factors [BR:
clum03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
117748962 (epas1a)
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Gene cluster
GFIT
Motif
Pfam:
PAS_11
PAS_3
PAS
bHLH_HIF1A
PAS_9
PAS_4
HLH
Motif
Other DBs
NCBI-GeneID:
117748962
NCBI-ProteinID:
XP_034415014
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All DBs
Position
19:13958636..13963615
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AA seq
376 aa
AA seq
DB search
MTADKEKRRAISREAARRRRQVESEVFEDLSRLLPLQPSVQAHLDKPSVIRFTLSYIRMH
TLLKGETWTKAKAGHKVKCGRVMNGGEERRERDGGREEEEEEEEETEEVEASEETNLYLR
ILEGFLIVLSTEGDMIYLSDNVNKYMGLTQNELMGHNIFEFTHPCDHEEIRNNLHLTAED
VWCGAKRHFVMRIKSALTHRGRSANLKSATWKVLHCQGRAKVCVGPASVSCLLLTCQPLP
LSHTLLSAHTFTSQHSMDMRFTYCDQRMTLLLGFSTEELLGRSIYDLCHTMDINHLTKNH
LNLCFKSQSVSGQYRMLVRSGGYVWVETHSAVIPGSQPSKSRPGAHQPLCILCVTYVLSG
VEEPSLQLSVDQIVHI
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgacagccgacaaggagaagagaagggcgattagccgcgaggccgccagacggaggcga
caggtggagtctgaggtgtttgaagatttgtctcgcctcctgccgctccaaccgtctgtc
caagctcacctggacaagccctccgtgattcgcttcaccctcagctacatacgcatgcac
acgctgctcaaaggggagacttggacaaaagcaaaggctggtcacaaagtaaaatgcggg
cgagtgatgaacggtggagaggaacgtcgcgagcgtgacggaggacgtgaggaagaggag
gaggaggaggaagaaacagaggaagtcgaggcctcggaggagacaaacctgtacctgagg
atcctggagggatttctgattgtgttgtccactgagggagacatgatctacctgtctgac
aacgtcaacaagtacatgggcttgacacagaatgagctgatgggacacaatattttcgag
tttactcacccttgtgaccatgaagaaatcagaaataatctacatctaacagcagaggac
gtttggtgcggtgcaaagagacactttgtcatgaggatcaaaagcgctctgacacacaga
ggaagaagcgccaacctcaagtcagctacgtggaaggttctccactgtcagggccgggcg
aaggtgtgtgtcggcccggcctcagtttcctgtctgctgctcacctgccagcctctgccc
ctctcacacacactcctcagtgcacacaccttcaccagccagcacagcatggacatgagg
ttcacgtactgtgaccagagaatgactctgcttttaggtttcagtaccgaggagctgctg
ggccgttccatctatgatctttgtcacacaatggacataaaccatttgaccaaaaatcat
ctcaacttgtgttttaagagtcagtcggtcagcggtcagtaccggatgctggtgagaagt
ggaggttacgtttgggtggagactcacagcgccgtcatccccggcagccaaccgtccaag
tcaaggccaggcgcccaccagccgctctgcatcctctgcgtgacctatgtcctcagtggt
gtggaggagccgtccttgcagctctctgtggaccagattgtgcacatttga
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