Cyclopterus lumpus (lumpfish): 117748964
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Entry
117748964 CDS
T09199
Name
(RefSeq) RNA-binding protein with serine-rich domain 1-like
KO
K14325
RNA-binding protein with serine-rich domain 1
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum03013
Nucleocytoplasmic transport
clum03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117748964
03015 mRNA surveillance pathway
117748964
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
clum03019
]
117748964
Messenger RNA biogenesis [BR:
clum03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
117748964
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_3
RRM_5
RRM_occluded
Nup35_RRM_2
RBD_AKAP-17A
RAP1
Motif
Other DBs
NCBI-GeneID:
117748964
NCBI-ProteinID:
XP_034415016
Ensembl:
ENSCLMG00005021979
LinkDB
All DBs
Position
19:complement(5047240..5050818)
Genome browser
AA seq
267 aa
AA seq
DB search
MAPSPTKRKEDDKSKPRGKEKSGATKDGADKDRSRDKNRTRRSASSGSSSSSSSSSSGSS
SGSSSSSASSHSGSSRSSSSSSSSSPSPSRQRHNNRRRSRSKSKSAKKDDRDRRRRSPTP
KPTKVYLGRLTRNVIKEHIQEIFSTYGKIKMIDLPMNRVHPLLSKGYAYVEFETSDEAEK
ALKHMDGGQIDGQEITVTAVLTPTVRPPPRRLSPPRRMPPPPPMWRRTPPRMRRRSRSPR
RRSPVRRRSRSPGRRRHRSRSSSNSSR
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
atggcgccatccccaaccaagaggaaggaagacgacaagagcaagccgcgaggtaaggag
aagtcgggagccacgaaagacggagccgacaaagaccggagccgagacaagaaccgcacg
cggcgcagtgcttccagtggcagcagcagctccagctccagcagcagctcaggctccagc
tcaggctcctccagttcctctgcctccagccactcgggctcatcccgctcttcttcctcc
tcctcgtcctcctcaccgagccccagccgccagcgccacaacaacagacgacgctcccgc
tcaaagtcaaaatcagcaaagaaggacgacagggaccgacggcgtaggagccccacaccc
aaacccaccaaggtctacctgggccggctgaccagaaatgttatcaaggaacacatccag
gagatcttctccacttacggcaagatcaagatgatcgacttgcccatgaaccgcgtccac
ccgctcctgtccaaaggctacgcctacgtggagtttgagacctccgacgaggcggagaag
gccctgaaacacatggatggaggtcagatcgacggccaggagatcaccgtcacagctgtg
ctgactcccacagtgcgccctcccccccgccggctgtcacctccccgcaggatgccccca
ccaccgccaatgtggcgacgcactccgcctcgcatgaggaggaggtctcggtctccacgg
cgccgctctccggttcgtcgcaggtctcgttcgcctggccgccgccggcatcgctcccgc
tctagttccaactcctctcgctag
DBGET
integrated database retrieval system
