Cyclopterus lumpus (lumpfish): 117749031
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Entry
117749031 CDS
T09199
Name
(RefSeq) DDB1- and CUL4-associated factor 7-like
KO
K11805
DDB1- and CUL4-associated factor 7
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
117749031
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
clum04121
]
117749031
03036 Chromosome and associated proteins [BR:
clum03036
]
117749031
Ubiquitin system [BR:
clum04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
117749031
Chromosome and associated proteins [BR:
clum03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.3/1.5)
117749031
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_WDR5
WD40_CDC20-Fz
Beta-prop_EIPR1
WD40_Prp19
Beta-prop_WDR3_1st
Beta-prop_RIG_2nd
WD40
Beta-prop_Aladin
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR3_2nd
MIOS_WD40
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
WD40_Gbeta
WD40_RFWD3
EIF3I
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_1st
WDR55
Beta-prop_WDR41
WD40_MABP1-WDR62_2nd
Beta-prop_EML
WD_LRWD1
Reductase_C
Motif
Other DBs
NCBI-GeneID:
117749031
NCBI-ProteinID:
XP_034415123
Ensembl:
ENSCLMG00005012678
LinkDB
All DBs
Position
19:9673907..9680414
Genome browser
AA seq
342 aa
AA seq
DB search
MSLHGKRKEIYKYEAPWTVYAMNWSVRPDKRFRLALGSFVEEYNNKVQIVGLEEENSEFV
CRNTFDHPYPTTKVMWIPDSKGVYPDLLATSGDYLRIWRVGETETRLECLLNNNKNSDFC
APLTSFDWNEVDPNLLGTSSIDTTCTIWGLETGQVLGRVNLVSGHVKTQLIAHDKEVYDI
SFSRAGGGRDMFASVGADGSVRMFDLRHLEHSTIIYEDPQHHPLLRLCWNKQDPNYLVTM
AMDSMEVVILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAAEDHQALIWDIQQMP
RAIEDPILAYTAEGEINNVQWATTQPDWIAICYNNCLEILRV
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctacacggtaaacgtaaagaaatctacaaatacgaggcgccatggacagtttac
gccatgaactggagcgtccgacccgacaaacggttccgcctcgcgctcggcagctttgtg
gaggagtacaataacaaggtccagatagttggtctggaggaggagaactcagagtttgtg
tgtcgaaacactttcgaccacccctaccccaccaccaaggtcatgtggattccagacagc
aaaggggtgtaccctgacctgctggccacgagtggagactacctgagaatctggagggtg
ggcgaaacagagacccgactggagtgcctgctcaacaataacaagaactcagacttttgt
gcaccactcacgtcctttgactggaacgaggtggacccaaacttgttaggtacttccagt
attgatactacctgtacgatctgggggttggagactggtcaggtgctgggcagggtcaac
ttagtgtcaggtcatgtcaagacgcagctcattgcacatgacaaagaggtgtatgacatc
tccttcagccgagcaggtggtggcagggatatgtttgcatcagtgggagcagacggctcg
gtccgaatgtttgatctccgtcaccttgaacacagcaccatcatctatgaagacccccag
caccacccactgctccggctctgctggaacaagcaggaccccaactacctggtcaccatg
gcgatggatagcatggaggtggtgatcttagatgtgcgtgtgccctgtactccggtggcc
agactcaacaaccacagggcctgtgtcaatggaatcgcctgggcgccgcactcctcctgt
cacatctgtacagcagcggaggaccaccaggctctaatctgggacatccagcagatgccc
cgggccattgaggaccctatactggcctacacagctgagggagagatcaataatgtccag
tgggccaccacccagcccgactggatcgctatctgctacaacaactgcctggaaatcctc
agagtctga
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