Cyclopterus lumpus (lumpfish): 117749055
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Entry
117749055 CDS
T09199
Symbol
sox9a
Name
(RefSeq) transcription factor SOX-9a
KO
K18435
transcription factor SOX9 (SOX group E)
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
clum03000
]
117749055 (sox9a)
Transcription factors [BR:
clum03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
117749055 (sox9a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
Sox_N
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
117749055
NCBI-ProteinID:
XP_034415149
Ensembl:
ENSCLMG00005021982
UniProt:
A0A8C3GB56
LinkDB
All DBs
Position
19
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AA seq
494 aa
AA seq
DB search
MNLLDPYLKMTEEQDKCLSDAPSPSMSEDSAGSPCPSGSGSDTENTRPSENGLLGVDGEF
KKEEDDKFPACIREAVSQVLKGYDWTLVPMPVRVNGSSKNKPHVKRPMNAFMVWAQAARR
KLADQYPHLHNAELSKTLGKLWRLLNEGEKRPFVEEAERLRVQHKKDHPDYKYQPRRRKS
VKNGQSESEDGSEQTHISPTAIFKALQQADSPASSMGEVHSPSEHSGSQGPPTPPTTPKT
EVSSGKMDLKREGGLRSLPDGPGGRQLNIDFRDVDIGELSSDVISHIETFDVNEFDQYLP
PNGHPGSTASVTYTGSYSISSGGGGGGAPVSPQAGAAAAWLAKSQNQQGQQHSLTPLGSG
GSEAAQAQHRTQIKTEQLSPSHYTEQQGSPQHVAYSSPFNLQHYSPPSSSYPAAISRAQQ
YDYSDHQGGGAASYYSHAGAGQGSGLYSTFSYMSSPSQRPMYTPIADNTGVPSIPQSSPQ
HWEQAPVYTQLTRP
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgaatctcctcgacccttacctgaagatgacggaggaacaagacaagtgtctctccgac
gccccgagcccgagcatgtccgaggactccgcgggctctccgtgcccgtccggctcgggc
tccgacaccgagaacacccgaccgtcggagaacggtctgctcggtgtggacggagagttc
aagaaggaagaggacgataagttccccgcatgcatccgcgaggcggtgtcccaggtgctc
aagggctacgactggactctcgtgcccatgccggtgcgcgtaaacggatcttctaagaac
aagcctcacgtgaagagaccgatgaatgccttcatggtgtgggctcaggctgcgcgcagg
aagctggcggatcagtacccacacctgcacaacgcggagctcagcaaaactctggggaaa
ctctggagacttctcaacgaaggggagaagcggccgtttgtggaggaggccgagcggctc
cgggtgcagcacaagaaggatcacccggactacaaataccagccgcggcggaggaagtct
gtgaagaacggccagagcgagtcggaggacggcagcgagcagacgcacatctcccccact
gccatcttcaaggctctccagcaggcggactccccggcctccagcatgggagaggtgcac
tctccgagtgagcactcaggctcccaggggccccctactcctcccaccaccccaaagact
gaggtcagctcaggcaagatggacctaaagcgcgaaggtggcctccgctctctgcccgac
ggccccggcggacgccagctcaacatcgacttccgcgacgtggacatcggcgagctgagc
agcgacgtcatctcccacatcgagacgttcgacgtcaacgagttcgaccagtacctcccg
cccaacggccaccccggctccaccgcgtcagtcacctacaccggcagctacagcatcagc
agcggcggcggcggcggcggcgccccggtcagcccgcaggcgggagccgccgcggcctgg
ctggcgaaaagccaaaaccagcagggacagcagcacagtctgacccctctcgggagcggt
ggctcagaggcagctcaggcgcagcacaggacccagatcaagacggagcagctgagcccg
agccactacaccgagcagcagggctccccgcagcacgtcgcctacagcagccccttcaac
ctgcagcactacagccccccctcatcctcctacccggccgccatctccagggcgcagcag
tacgactactccgaccaccaggggggtggcgccgcctcctactacagccacgcgggggcg
gggcagggctcaggcctgtactcgactttcagctacatgagcagccccagccagaggccc
atgtacacgcccatcgccgacaacacaggggtgccctccatcccacagagcagcccgcag
cactgggagcaggccccggtctacacccagctcaccagaccatga
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