Cyclopterus lumpus (lumpfish): 117749118
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Entry
117749118 CDS
T09199
Name
(RefSeq) 5-hydroxytryptamine receptor 3A-like
KO
K04819
5-hydroxytryptamine receptor 3
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
117749118
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
clum04040
]
117749118
Ion channels [BR:
clum04040
]
Ligand-gated channels
Serotonin (5-HT3)
117749118
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Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
MamF_MmsF
DUF2572
Motif
Other DBs
NCBI-GeneID:
117749118
NCBI-ProteinID:
XP_034415224
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All DBs
Position
19:14499035..14503672
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AA seq
446 aa
AA seq
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MMHLTFLLLIILTDGSFCKEVCSYQDVVDYLNLTADNSVFKMTRPVLDYKHPTVVQLDIL
LYAILAVIEKTQTFIPFVWVIMMWNNERISWDPAQFCGITQVSVPMEMLWKPDLFIQEMI
QKDDSTQNPYMYVYHDGKVVVEEGLKVVSTCKMDVHKFPFDTQSCNISVGSAIHCVDEIR
LRPFSNTSRVTQFSQELIKTQGEWEFLQLSVSGHNFTFGDRSWNILIYTFTMKRRPLLHV
TNFMLPVLFFLILDLASFFIADHRGEKLGFKVTVLLAISVLLLILNDILPSVSNKTPLIA
TYCIVIFALMLLSVLETILVTYLMEKDSQEKLGLSDDREVQREAVKNRNTEEKKQTRCLC
VCKASDELLPVAQEVVSGIQSVEFNALLLILEELKGLQNTLTLRLSCRQNRGKFSQWAAR
INRAFFIFYVTTVPVFLSLIFIAWNT
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgatgcacctcacttttctcctcctgatcatcctcacagatgggtcgttctgtaaggaa
gtgtgtagttaccaggatgtagtggactacctgaacctgaccgcagacaacagtgtgttc
aaaatgacccgacccgttctggactacaaacaccccaccgtggtgcagctggacatcctc
ctctatgccatcctggctgtgattgagaaaacgcaaacttttattccttttgtctgggta
ataatgatgtggaacaatgaacgcatttcatgggaccctgctcagttttgcggaatcact
caggtttcagttcctatggaaatgctctggaaaccagacctctttatccaagagatgata
caaaaggatgactccactcaaaatccgtacatgtacgtgtaccacgacgggaaggtcgtt
gttgaagagggcttgaaggtggtcagcacttgtaaaatggacgtgcacaagttccccttc
gacacgcagagctgcaacatctccgttggatctgcaatacactgtgttgacgagatccgt
ctccgtcctttctccaacacgtctcgggtcacccagttctcccaagagctgataaagact
cagggagagtgggagttcctccaactgtctgtttccggccacaatttcaccttcggcgat
aggtcgtggaacattctcatatacactttcaccatgaagaggaggcccctcctccatgtc
accaacttcatgttgcccgtcctgttcttcctgattctggacctcgcctccttcttcatc
gcagaccatcgaggagagaagctgggcttcaaagtcaccgttttgctggccatctccgtc
ctgctgctcatcctgaatgacatcctgccctccgtatccaacaagactccactcatagcg
acctactgcatcgtgatttttgctctgatgctgctcagcgtgctggagacgatcttggtt
acatacctcatggagaaagactcccaggagaagctcggtctgagtgacgacagggaggtc
caacgagaggcagtcaagaaccgtaacacagaggagaaaaaacaaacgcgctgtttgtgc
gtctgcaaagcgtctgatgagttgctgccggtggctcaagaggttgtcagcggcattcag
tcagtagagtttaatgcattactgctgatcctggaggagctgaaggggctgcagaatact
ttgactctgcgcctcagctgcagacagaacagagggaagttcagccaatgggccgcaaga
atcaacagagctttcttcattttctacgtcaccaccgtgccagtgtttctgtccctcatc
ttcatcgcatggaacacttag
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