Cyclopterus lumpus (lumpfish): 117749124
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Entry
117749124 CDS
T09199
Name
(RefSeq) PDZ domain-containing protein 7-like
KO
K21882
PDZ domain-containing protein 7
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
clum03037
]
117749124
04990 Domain-containing proteins not elsewhere classified [BR:
clum04990
]
117749124
Cilium and associated proteins [BR:
clum03037
]
Primary cilia and associated proteins
USH complex and associated proteins
117749124
Domain-containing proteins not elsewhere classified [BR:
clum04990
]
PDZ domain-containing proteins
Other PDZ domain-containing proteins
117749124
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
117749124
NCBI-ProteinID:
XP_034415229
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Position
19:complement(15945000..15952743)
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AA seq
886 aa
AA seq
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MAHSSDPSRREKTAGTRGSHAATRNLLRKKEQRRRGIRSSSPMGRVILINSPVDGGDDSE
DLHTITVDKNVDGKLGFSVRGGSEHGLSIFVSKVEDNSTAEEAGLLVGDKLVEVNGVSLE
SITMSSAVKVLTGNNRLRMVVRRVGKVPGILYSKEKTTWVDLIHRRMVVEESGRTPSVAS
SGSALQRIVHLSTTSDDYYLGFNIRGGKEFGLGIYVSKLDPGGLAEQNGIKMGDQILVAN
GVSLEDISHSSAVEVLKSQTHVMLTIKEAGRYPAYKEMVAEYRWLNKLANGTQKSSSQGS
ESNSSASSLSSGTPVSSLSGLSQLMFPPSMPFGSDMVDVCISTEDQRSGSDRTETAMQTD
LPETTRSLGRTTLLRDTVIRGEEEEEEEEEEEVKVKGGGRQESPKTAVLLALSRPSRPIS
RSQSQVTVAEVKEEKKQKGKHPEVESTLQRSKTFVNSLFKGGRKRDTSRGRSKSPSKGGR
PVGATPNPEMLGAVEDMARRLLTEGEAAAVMKTCRRYLAERSVENLIRHLLAVLDRPEKL
LLLREVRMLLPPPDLSAFNNVVTPVEVEAYDILKYRSIQTSPLRSPTSGRAPKRRLITPI
PDFRGGFELHNAEEVEKEGHLLDELEKLSVSGPRGTRDRPPLSRCFTPLLDIPVDGYDTE
PRDVRPPSAGAAPLPNWLLARGQDSRPPLRTDIGTIRSVHFDEVSLHSTSERGRSPFRNG
HSEGPKEKSGGRSEDGVFTLQGAARGSRPSLAQVFRPRPDQVNGHRASARSGLDGAEPER
DYELKTVSISKTKQSLGISISGGMESKVQPVVKIEKIFPGGAASTCEVLKAGFELVSVDG
VSLQGVTHPHAVDIIRKAFSHKARDPMVFVVKVPKHVLKGDLRLSS
NT seq
2661 nt
NT seq
+upstream
nt +downstream
nt
atggctcactcgtcggacccgtcccgcagggagaagaccgccggcacccgagggtcacac
gcggctacacgcaacctcttacggaagaaggagcagcggcggcgtggaatccgatcctcc
tcgcccatgggccgggtcatcctcatcaactcccctgtggatggtggcgacgacagcgag
gacctccatacgatcacggtggacaagaacgtggacggcaagctgggcttcagcgtgcgc
gggggctcagagcacggcctcagcatcttcgtcagcaaggtggaggacaacagcacagca
gaggaggccggcctgctcgtcggtgacaaactggtggaggtgaatggcgtcagcctggag
agcatcacgatgagcagcgccgtgaaggtcctgacgggcaacaacaggctgaggatggtg
gtgaggcgcgtcggcaaagtgccgggcatcctctactccaaggagaagaccacctgggtg
gatttgatacacaggcgtatggtggtggaggagagcggacggacaccttcggtcgccagc
tctggaagcgccctccaaaggatcgtccacctgtccaccacctccgacgactactacctg
ggcttcaacatccggggggggaaggagtttggcctgggcatctatgtctccaaactggat
ccgggtggcctggcggagcagaacgggataaagatgggggaccagatcctggtggccaat
ggcgtgagcttggaggacatcagccacagcagcgctgtggaggtgctgaagagccaaacg
cacgtcatgctgaccatcaaggaagcgggacgataccctgcttataaagagatggtggcg
gagtacaggtggctcaataagctcgccaacggtactcagaaatcttcgtcccaggggtcg
gagtccaactcctcggcctcctctctgtcgtccgggacgccggtcagctccctgagcggc
ctgtcgcagctcatgttccctcccagcatgccgttcgggtcggacatggtggacgtctgc
atctccaccgaggaccagaggtcagggtcggaccggaccgagaccgccatgcagacggac
ctccccgaaaccacgcgcagcctggggcgaaccactctgctcagagacacggtgatccgc
ggagaggaggaggaggaggaggaggaggaggaggaggtgaaggtgaagggcggcgggagg
caagagtcccccaagacggccgtgctgctggctctcagccgaccgagccgaccgatcagc
aggtcccagagccaagtcaccgtggcagaggtcaaggaggagaagaagcagaaggggaag
cacccggaggtggagagcacgctgcagcgctcgaagaccttcgtcaactctctattcaag
ggtggacgcaagagggacacgtccaggggccggtccaagtccccgtccaaagggggacga
ccggtgggcgcgacgccaaatccggagatgctcggcgcggtggaggacatggcccgcagg
ctgctgaccgagggggaggcggccgccgtgatgaagacgtgccgaaggtacttggcagag
cggtcggtggagaacttgatccgccacctgctggccgtgctggaccgacctgagaagctg
ctgctgctgagggaagttcggatgctgcttcctcctcccgatctgagtgcattcaataac
gtggtgacccccgtcgaggtcgaggcctacgacatcctcaagtatcgctcaatccaaact
tctcctcttcgctctcccacatccggccgagcacccaaacggcgcctcatcactcccatc
ccggatttcaggggaggcttcgagctccacaacgctgaggaggtggagaaggagggccac
ctgctggatgagctggagaagctgagtgtgtccgggccccggggaaccagggacaggccc
cctctctccaggtgcttcaccccgctgctggacatacccgtggacgggtacgacaccgag
cccagagatgtccggcccccgtccgccggcgccgcgccgctccccaactggctgctggcc
cgcggccaagactctcgccctcctctccggacggacatcggcaccattcgctccgtccac
ttcgacgaggtgtcgctgcactcgacctcggagaggggacggtccccgttcagaaacggc
cactccgaaggcccaaaggagaaaagtggagggcggagtgaagatggcgtgttcacgctg
cagggcgccgctcgcgggagtcggccctcgttggcgcaggtgttcagaccgcgtccggac
caggtgaacgggcatcgggcgtcggctcgaagcggactcgacggcgctgagcccgagcgg
gactacgagctcaaaaccgtcagcatctccaagaccaaacagtctctgggcatcagtata
tctggtgggatggagtcgaaggttcagccggtggtgaagatcgagaagatcttccctgga
ggagctgcctccacctgtgaagtgctcaaggctggattcgagttggtgtctgtggacgga
gtgtcgctgcaaggcgtgacccacccgcacgccgtcgacatcatccggaaagccttcagc
cacaaggccagagaccccatggtgttcgtggtcaaagtccccaaacacgttttgaaagga
gacttgagactctcgtcgtga
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