Cyclopterus lumpus (lumpfish): 117749189
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Entry
117749189 CDS
T09199
Name
(RefSeq) nucleolar transcription factor 1-B-like isoform X1
KO
K09273
upstream-binding transcription factor
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
clum03000
]
117749189
03021 Transcription machinery [BR:
clum03021
]
117749189
Transcription factors [BR:
clum03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
UBF
117749189
Transcription machinery [BR:
clum03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
UBF
117749189
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
ALMS_motif
DHC
MAGI_u5
HPPK
Motif
Other DBs
NCBI-GeneID:
117749189
NCBI-ProteinID:
XP_034415320
LinkDB
All DBs
Position
19:9815074..9820169
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AA seq
449 aa
AA seq
DB search
MGGSVTEEWTQANLQQLLAAMKSSLPGHARQLSYITALKTVDWNMVAFPPFSPEACQEKW
RQILRKMCKTRTLIDLIVEAEGVITNPVKRAKIHPECPKRPAPPTAFFFEENVSNYQKKH
PNMSRKNIFSKLCKKYKSLPDEEKAPYEDKFQLVNEEYKRRKQVFSKRYLNADCGKPKTT
LKKLPANSKTQVTEDTVGMPPKPSTNGYILFCKEQSTSGMKVEGCKPVNVWAQSWRDMTE
KQKEMYNTRCKELKRQYVVELNEYLMNFDEEKQQRILMETGIKRPKVLTGIKRTDQKKIP
GEPKMPFRSGCDTFRTKQMFLLRDSILNSKERFCKVSKMWLDLPAVEKQRYHEEVFEYNK
IYSLELRKWFETLSAAEQQFYRRHNPSKIRYLDVAQMEVYELGKPRGSIYRPSDSEDEDT
EDSDYEEENNLESDEELEEEDEVIFFELF
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgggtggaagtgtgactgaagagtggacccaggcaaacctgcagcagcttctggctgcg
atgaagtccagcctcccaggacatgccagacagctctcatacatcacagcactgaaaact
gtggactggaatatggtggctttcccccctttctctcctgaagcatgccaagaaaagtgg
agacagattttgcgcaaaatgtgtaagactcggaccctcatagacctcatcgttgaagcg
gaaggtgtcattaccaatccggtcaagagagcaaagatccatccagagtgcccaaagaga
cccgcccctccaactgctttcttttttgaggaaaatgtgtctaattatcaaaagaaacac
ccaaatatgagcaggaaaaatatattcagtaagctatgcaagaagtataagagtctccca
gatgaagagaaggctccgtatgaggacaaatttcagcttgtaaatgaggaatacaagaga
agaaagcaggtgttcagtaaacgatatctaaacgctgactgtggcaagcccaagaccaca
ttgaagaagctccctgcaaacagtaaaactcaggtcactgaagatacagtgggcatgcct
cccaagccttctacaaatggatatatactattctgcaaagagcagtctacttctgggatg
aaagtcgaaggatgtaaacctgtaaatgtgtgggcccaaagttggcgagatatgactgag
aaacagaaggaaatgtacaacacacgctgcaaagagttgaagagacagtacgtggttgag
ctgaatgaatatcttatgaattttgatgaggagaagcagcagcgcattctaatggaaacc
ggcatcaaaagaccaaaagtgcttacgggcattaaaagaacagatcaaaagaaaattcct
ggggagcccaaaatgccatttcgatctggttgtgacactttccgcacaaaacaaatgttt
cttctgagggacagcatcctaaactcaaaggaacgcttttgcaaggtcagcaaaatgtgg
ctggacctcccggcggtggagaagcaacgctaccatgaggaagtatttgaatacaataaa
atatactccttggagcttcggaagtggtttgagacattgtcggcagcagagcagcaattt
tatcggagacataaccccagtaaaatccgataccttgatgtcgcccaaatggaagtttat
gaattaggaaaaccacgtggttctatctatagaccatcagattcagaagatgaagacact
gaggacagcgattatgaagaagagaacaatttggagtctgatgaggagttggaggaagaa
gacgaagtcatcttttttgagttgttctaa
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