Cyclopterus lumpus (lumpfish): 117749309
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Entry
117749309 CDS
T09199
Symbol
chpf2
Name
(RefSeq) chondroitin sulfate glucuronyltransferase
KO
K03419
chondroitin polymerizing factor 2 [EC:
2.4.1.226
]
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
clum01100
Metabolic pathways
Module
clum_M00058
Glycosaminoglycan biosynthesis, chondroitin sulfate backbone
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
117749309 (chpf2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
clum01003
]
117749309 (chpf2)
Enzymes [BR:
clum01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.226 N-acetylgalactosaminyl-proteoglycan 3-beta-glucuronosyltransferase
117749309 (chpf2)
Glycosyltransferases [BR:
clum01003
]
Glycan extension
O-Glycan
117749309 (chpf2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CHGN
Fringe
Motif
Other DBs
NCBI-GeneID:
117749309
NCBI-ProteinID:
XP_034415537
Ensembl:
ENSCLMG00005014371
LinkDB
All DBs
Position
20:5820135..5826383
Genome browser
AA seq
764 aa
AA seq
DB search
MRLSSFLAVFRPALPLILGLSLGCSLSLLMVSWTQGDADDSCGDELGNGRLFTGRGDAQK
DSRDGAGDEDFQPRIVPYHKDPNKPHKKVLRTRYIHTELGIRERLLVGVLTSRATLNTLA
VAVNRTVAHRFHRTFFFTGLRSPKVPHGMTVVAHGDDRPVWLMYETVRHLHQHYGSDYDW
FLLAQDDTYMQADRLSELVGHLTAGQDLYMGRAEEFIGGEEKARYCHGGYGYLLSRSLLA
RLQPHLDTCRNDILSVRPDEWLGRCIIDYLGLSCVEVHQEMTYRYFELGKNADPEREDGV
QFKNAFTVHPISEPNLMYRLHKRFSQIELEWTYLQIQQLQVQINNLSELTPEGKAGVTWP
IGINPPFKPKTRFEVINWEYFTEEHIYSCIDSSPKCEMRGADRADVNAVLEIAVERLNER
YQPQLRFRKRRLLNGYRRFDPTRGMEYVLDLALEAYTQKGHSQVIAKRVNLLRPLSAVEI
IPMPYVTEATRVQVILPVTAHDQDYVGNFLDMYVMNTLDTHDNVLLTFLFIYDPFDAQRV
SQTDVFAGIKAMIGEVEKRYGDVKIPWISVKTEVPSQVKLMDIISKKHPVDTLFFLAGVW
TEVNADFLNRCRMNAISNWQVFFPIHFQEYSPAVMYRDQQPSAASSSFASESLRDGHFDR
HVFDEACFYNADYMTARTKMAADILDNEELLESMDVYDIFVRYSGLHVFRAVEPALIQKY
VRRACNPRFSEDIYHRCVLSNLEGLGSRSHLAMAIFEQEQANST
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctttcctcttttttggccgtgttcaggcctgctttgccccttatcctcgggctg
tctctgggctgtagtctgagccttttgatggtgtcctggacacaaggggacgccgatgac
tcctgtggagatgagctgggcaatgggaggcttttcacgggccgaggcgatgcccagaag
gactcgagggatggagccggagatgaagacttccagcctcgcatcgtgccctatcacaag
gacccaaacaagccacacaagaaagtcctcagaactcgttatattcacactgagctgggc
atcagagagcgactgctggtgggcgtcctgacctcccgggccaccctcaacacgctggcc
gtggcggtcaatcgcacagtcgcccaccgcttccatcgcaccttcttcttcacgggcctg
cgcagcccgaaggtccctcacggcatgactgtggtcgcccacggcgacgaccgtcccgtg
tggctgatgtacgagacagttcgccacctccatcagcactatggctccgactacgactgg
ttcctcttagcccaggatgacacttacatgcaagcagatcgcctgtcggagctggtgggc
cacctcactgcaggtcaggacctttacatgggcagggcagaggagtttattggtggagaa
gagaaggcacgctactgccacgggggctacggctacctgctgtcccgcagtctgctggcc
cgtctgcagccccaccttgacacctgtcgtaatgacatcctcagtgtgagacctgacgag
tggctgggccgctgcattattgactacctgggtctcagctgtgtggaggtgcaccaggag
atgacctatcggtacttcgagctcgggaaaaacgcagatccagagcgtgaagacggcgtc
cagtttaaaaatgccttcacagtccatccgatatcagagccaaatctcatgtaccgcctg
cacaaacgcttcagccagattgagctggaatggacttacctacagatacaacagctgcag
gtgcagatcaacaacctgagtgagctgacaccagagggtaaagctggagtcacgtggccc
atcggaatcaaccctcccttcaaaccaaaaacccgatttgaggttatcaactgggagtac
ttcacagaggagcacatatactcgtgcatcgacagctcccccaagtgtgagatgaggggg
gccgaccgcgcggacgtaaacgcagtgctggagatagcggtggagcggctaaacgagcgc
taccagccgcagctgcgtttccgcaagcgccgtctgctgaacggttacaggcgctttgat
cccacacgtggcatggagtatgtgctggacctcgcgctggaggcctacacccagaaaggc
cacagccaagtcatcgccaagcgggtcaacttgttgcgacctctcagtgcggtcgaaatt
atccccatgccctacgtgacggaggcaacgcgggtgcaggtcatcctgcccgtcactgcc
cacgatcaggactacgtcggcaacttcctcgacatgtacgtgatgaacactttggacacc
cacgacaacgttttgctcacgttcctgttcatctacgatcccttcgatgcgcagcgggtc
agccagactgacgtgttcgccggcatcaaggccatgatcggggaggtggagaagcgctac
ggagacgtgaagatcccctggatcagcgtgaagacggaggtgccctcccaggtcaagctg
atggacatcatctctaagaagcacccggtggacacgctgtttttcctggccggcgtgtgg
acggaggtcaacgccgacttcctgaatcgctgcagaatgaacgccatcagcaactggcag
gtgttcttccccatccacttccaagagtacagccctgccgtcatgtaccgcgaccagcag
ccctctgcggcctcctcctctttcgcgtcggagtcgctgcgagacggacactttgaccgc
cacgtcttcgacgaggcctgcttttacaacgcggactacatgaccgcacggaccaagatg
gccgctgacatcttggacaacgaggagctgctggaaagcatggacgtgtacgacatattc
gtccgttactctggcctacacgtgttcagagctgtggagccggcgctgatccagaaatac
gtgcggcgagcgtgcaacccgcgattcagcgaggacatctaccaccgctgtgtcctcagc
aacctggagggtctggggtcccgctctcatctagccatggctatttttgaacaagagcag
gccaacagcacctga
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