Cyclopterus lumpus (lumpfish): 117749310
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Entry
117749310 CDS
T09199
Symbol
abcf2b
Name
(RefSeq) ATP-binding cassette, sub-family F, member 2b
KO
K06185
ATP-binding cassette, subfamily F, member 2
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
clum03009
]
117749310 (abcf2b)
Ribosome biogenesis [BR:
clum03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
117749310 (abcf2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_tran_Xtn
AAA_21
SMC_N
AAA_29
MMR_HSR1
RsgA_GTPase
AAA_22
AAA_28
AAA_16
VapE-like_dom
AAA_14
NACHT
AAA_33
Dynamin_N
AAA_15
AAA_23
AalphaY_MDB
RNA_helicase
MukB
Motif
Other DBs
NCBI-GeneID:
117749310
NCBI-ProteinID:
XP_034415538
Ensembl:
ENSCLMG00005013875
UniProt:
A0A8C3G2E3
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All DBs
Position
20:complement(5813890..5820102)
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AA seq
611 aa
AA seq
DB search
MPSDLAKKKAAKKKEAAKNRQRTKKTDEDEEGDQPETQVNGAESNGIVHLTKELDEFELA
KTEARAVTGVLSSHPNSTDVHVSSLSLTFHGQELLADTSLELNSGRRYGLIGLNGTGKSM
LLSAIGHREIPIPEHIDIYHLTREMSPSEKTALHCVMEVDEQRIMLEKEAERLAHEDSEC
EKLMELYERLEELDADKAEVRASRILHGLGFTAAMQRKKLKDFSGGWRMRVALARALFIK
PFMLLLDEPTNHLDLDACVWLEEELSQFKRILVLISHSQDFLNGVCTNIIHLHSKKLKNY
TGNYDQYVKTREELEENQMKRFNWEQDQITHMKNYIARFGHGSAKLARQAQSKEKTLQKM
VASGLTEKVESDKTLSFSFHPCGKIPPPVIMVQNVSFKYSDDTPHIYKNLEFGIDLDTRV
ALVGPNGAGKSTLLKLLMGELLPTDGMIRKHSHVKIGRYHQHLTEQLELDLSPLEYMMKC
YPNIKEKEDMRKIIGRYGLTGKQQTSPIRNLSDGQKCRVCFAWLAWQNPHLLFLDEPTNH
LDIETIDALGDAINEFEGGTMLVSHDFRLIQQVAQEIWVCENQTITKWNRDILAYKEHLK
AKLEKQKAHDI
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgccatccgacttagccaagaagaaggcagcaaagaagaaggaggctgccaaaaatcgc
cagcgtacaaagaaaactgatgaggatgaggagggtgaccagccagagacacaagttaat
ggagcagagagcaatggtattgtccatttgacaaaggagctggatgaatttgaactggcg
aagacggaggcacgggcagtgacgggtgttctgtcctcccaccccaacagcacagatgtc
catgtaagcagcctgtcgcttaccttccatggccaagagctgcttgcagacacaagcctg
gagctcaactcgggcagacgctacggtctcattggccttaacggcacaggaaaatccatg
ctgttgtcagccattgggcatcgtgagattcccattccagagcacatagatatttaccac
ttgacccgtgagatgtctcccagcgaaaagactgctctgcattgtgtcatggaggtggat
gaacagaggattatgctggagaaggaagcagagagacttgcccatgaggactctgagtgc
gagaagctgatggaactgtatgagcgtctggaggagctggatgccgacaaggcagaggtg
cgagcttctcggattctccacggtttgggttttaccgctgctatgcagcggaagaaactc
aaggacttcagtggaggatggaggatgcgcgttgctctggccagagccctgttcatcaag
cccttcatgctgttgctggatgagcccactaaccacttggatctggatgcttgtgtgtgg
ctggaggaggagctcagtcagttcaagcgaatccttgtgctcatttcacattctcaagac
ttcctgaatggtgtgtgcaccaacatcatccacctgcattcgaaaaaactgaaaaactac
acgggtaactatgaccagtatgtgaagaccagagaggagctggaggagaaccaaatgaag
cgtttcaactgggaacaggaccagatcacacacatgaagaattacattgccaggtttggt
cacggctctgcaaagctcgcacgacaggcacagagcaaagagaagacgctgcagaagatg
gtggcctccggcttgactgaaaaagttgagagtgacaagactctatcgttttcttttcat
ccctgtgggaagattcctcctcctgttatcatggttcagaacgtgagcttcaagtacagc
gacgacacaccgcacatatataaaaacctggagtttggtattgacttggatacgcgagtg
gctctggtggggcccaatggagcaggaaagtccacactgctgaagctgctgatgggagag
ctgctacccactgacggcatgatccgcaaacattctcacgtcaagattggcagatatcac
cagcatctgacggagcagctggaactggacctgtctcctttggagtacatgatgaagtgt
taccctaatatcaaagaaaaagaggatatgaggaagatcatcggtcgctacgggctgacg
ggaaagcagcagaccagtccaatcaggaacttgtccgatggtcaaaagtgccgggtatgt
tttgcctggctggcatggcagaaccctcacttgttgttcctcgacgagccgactaatcac
ttggatatcgagactattgacgcgctgggagacgccatcaatgagtttgaaggcggcacg
atgctagttagccacgacttcaggctaattcaacaggtggctcaggagatctgggtgtgt
gagaatcaaaccatcacaaagtggaatcgtgacatcctggcatacaaggagcacttgaag
gccaagctcgagaagcagaaggcgcatgacatctaa
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