KEGG   Cyclopterus lumpus (lumpfish): 117749313
Entry
117749313         CDS       T09199                                 
Symbol
chmp4c
Name
(RefSeq) charged multivesicular body protein 4c
  KO
K24782  charged multivesicular body protein 4C
Organism
clum  Cyclopterus lumpus (lumpfish)
Pathway
clum04144  Endocytosis
clum04217  Necroptosis
Brite
KEGG Orthology (KO) [BR:clum00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    117749313 (chmp4c)
  09143 Cell growth and death
   04217 Necroptosis
    117749313 (chmp4c)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:clum04131]
    117749313 (chmp4c)
   03400 DNA repair and recombination proteins [BR:clum03400]
    117749313 (chmp4c)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:clum04147]
    117749313 (chmp4c)
Membrane trafficking [BR:clum04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-III complex
    117749313 (chmp4c)
DNA repair and recombination proteins [BR:clum03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    117749313 (chmp4c)
Exosome [BR:clum04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   117749313 (chmp4c)
  Exosomal proteins of colorectal cancer cells
   117749313 (chmp4c)
SSDB
Motif
Pfam: Snf7 DUF155 Phage_TAC_15 DUF3573
Other DBs
NCBI-GeneID: 117749313
NCBI-ProteinID: XP_034415542
Ensembl: ENSCLMG00005021954
UniProt: A0A8C3AX18
LinkDB
Position
20:6678687..6681470
AA seq 232 aa
MSKIAKLFKGSSSSSSSSSPKSKHHRSRGGPSPQEAIHKLRETEEMLTKKQDYLEKRIEQ
ELLIAKKNGTKNKRAALQALKRKKRLEQQLTQIDGTLSTIEFQREALENSHTNTEVLKNM
GFAAKAMKKVHENMDVDKIDDLMQDITEQQDVAREISDAISGPFGETFDEDELLAELEEL
EQQELEDSMKSMGGLPSVPSSKLPSARPSHRATTKKRVEDDDDMRMLASWGT
NT seq 699 nt   +upstreamnt  +downstreamnt
atgagcaaaatcgcgaaactttttaaggggagctccagctcgagctcatcgagctccccg
aagtccaaacaccaccggtcgcggggaggcccttcgccccaagaggccattcacaaactc
cgggaaacggaagaaatgctgacgaagaagcaagactacctggaaaagaggatagagcaa
gaactcctgatcgccaagaagaacggcacaaaaaacaagcgagctgcactgcaggccctg
aagagaaagaagcgcttggagcagcagctcacgcagatcgatggcaccctctccaccatc
gagtttcagagggaagctttggagaactcgcacaccaacaccgaggtcctgaagaacatg
ggctttgctgccaaggccatgaagaaggtccacgagaacatggacgttgacaagatcgat
gatctgatgcaggacatcacagagcaacaggacgtggcccgagagatcagcgacgccatc
tccggacccttcggcgagacatttgacgaggacgagctgctggcagagctggaagagctg
gaacagcaggagctcgaggacagcatgaagagtatgggcggactacccagcgtgcccagc
tccaaactgccttcagctcggcccagtcaccgcgccacaaccaagaaaagggttgaagat
gatgacgacatgcgtatgctggcatcatggggaacttaa

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