Cyclopterus lumpus (lumpfish): 117749372
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Entry
117749372 CDS
T09199
Symbol
abcd3a
Name
(RefSeq) ATP-binding cassette sub-family D member 3a isoform X1
KO
K05677
ATP-binding cassette, subfamily D (ALD), member 3 [EC:
7.6.2.4
]
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum02010
ABC transporters
clum04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
117749372 (abcd3a)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
117749372 (abcd3a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
clum02000
]
117749372 (abcd3a)
Enzymes [BR:
clum01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.4 ABC-type fatty-acyl-CoA transporter
117749372 (abcd3a)
Transporters [BR:
clum02000
]
ABC transporters, eukaryotic type
ABCD (ALD) subfamily
ABCD3 subgroup
117749372 (abcd3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane_2
ABC_tran
SMC_N
AAA_23
Rad17
BrxL_ATPase
AAA_21
AAA_29
AAA_27
nSTAND1
AAA_16
DUF6897
Motif
Other DBs
NCBI-GeneID:
117749372
NCBI-ProteinID:
XP_034415712
Ensembl:
ENSCLMG00005019602
LinkDB
All DBs
Position
20:20323251..20344959
Genome browser
AA seq
659 aa
AA seq
DB search
MATFSKYLTAKNSSIAGGVLLVLYLLKRRRRTLHPGGRKGGSDKVLNTEKDGKKDHAAVD
KVFFLRIFQIVRIMVPQVFCKETGYLLLIAAMLVTRTYCDVWMIQNGTMIESAIIGRSTK
DFKTFLFSFIKFMPLIALVNNFLKLGLYELKLRFRERLTKNLYDQYLQGFTYYKMGNLDN
RIANADQLLTQDVEKFCNSVVDLYSNLSKPLLDICLYTFKLTSAIGAQGPAVMMTYLLIS
GLFLTRLRRPIGKMTVTEQRYEGEYRFVNSRLITNSEEIAFYNGNIREKQTIYTTFKKLV
DHLHNFIFFRFSMGFVDSIIAKYLATVVGYMVVSRPFLTTSHPRHLHSTHSELLEDYYQS
GRMLLRMSQALGRIVLAGREMTRLSGFTSRITELMKVLKELNAGKYERTMVSQQEKESDG
AEKLLLVPGSGHIINRDNIIKFDHAPLATPNGDVLIKDLTFEVRSGTNVLVCGPNGCGKS
SLFRVLGELWPLFGGQLTKPERGKLFYVPQRPYMTLGSLRDQVIYPDTYEEQQRKGISDH
VLKEYLDNVQLGHILDREASWDSVQDWMDVLSGGEKQRMAMARLFYHKPQFAILDECTSA
VSVDVEDFIYSHCRTVGITLFTVSHRKSLWKHHEYYLHMDGRGNYEFKPITEETVEFGS
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atggcgactttcagtaaatatctgacagcaaaaaactcgtccatagcaggcggtgttttg
ctggttttatacctgctgaaacgtagaagacggacgttgcatcccggcggtagaaaagga
ggctcagataaagtgctgaacactgaaaaagatggcaaaaaagaccatgcagcagtggac
aaggttttcttcctccgaatcttccagattgtgcggatcatggtacctcaagttttctgc
aaagagactggctaccttctccttatcgctgccatgttggtgaccaggacctactgtgac
gtatggatgatccagaacggcaccatgatcgaaagtgcaattatcggtcgctcgacaaaa
gatttcaagaccttcttgttcagctttatcaaattcatgccacttatcgccttggtgaac
aacttcctgaagttgggtctgtacgagctgaagctgaggttccgtgagaggctcactaag
aacttgtacgaccagtacctgcaaggtttcacctactacaaaatgggaaacctggacaac
cggatagccaatgcagaccagctactgacacaggatgtggagaaattctgcaacagtgtg
gtggacctctactctaacctcagcaagcctctgttggatatctgtctgtacacctttaag
ctgacaagtgccattggagctcagggcccggccgtcatgatgacatacctactgatctca
ggcctcttcctgaccagactgagaagacccataggcaagatgaccgtcaccgagcagcgg
tacgagggagagtaccgcttcgtcaactctcgcctcatcactaatagtgaggagattgca
ttctacaatgggaacatcagggaaaagcagaccatttacaccacattcaagaaactggtg
gaccacttgcataactttatcttctttcgcttctctatgggatttgttgacagcataatt
gccaagtacctggccaccgtagtaggttacatggtggtcagccggccattcctcaccacg
tcccaccctcgacacctgcacagcacacactctgagctgcttgaggactactaccagagt
gggaggatgctcctgagaatgtcccaggccttgggcaggattgtactggctggccgagag
atgacccgtctctctggattcacatctcgtatcactgaactgatgaaagttttgaaggag
ctgaatgctggcaaatatgaacgcaccatggtctcccagcaggagaaagaatcagacggt
gcagagaaactcctacttgttcctgggagtggtcacattatcaacagagataacataatc
aaatttgaccatgcgcccctagcaacacccaacggagacgttttgatcaaagacctcaca
tttgaggtgaggtctggcaccaatgttcttgtgtgtggacccaacggctgtggaaagagc
tctctgttcagagtgctcggagagctgtggcctctgtttggaggacagctgacaaaacct
gagagagggaagctcttctatgttccacagcgaccttacatgactctgggttctctgagg
gaccaagtcatttaccccgacacctacgaagaacagcaaaggaaaggcatctctgaccac
gtattgaaagagtatctggacaatgttcagctgggtcacatcctggacagggaggcgagc
tgggactcagtccaggactggatggatgtcctcagtggaggagagaagcagagaatggct
atggccaggctgttctaccacaagccccagtttgccattctggatgagtgcaccagtgca
gtgagtgtagatgtggaggatttcatctacagccactgcaggacggtgggcatcaccctg
ttcacagtgtcccataggaagtctctgtggaagcaccacgagtattacctccacatggac
gggagagggaactacgagttcaagcccatcacagaggagacggtggagtttggctcctaa
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