Cyclopterus lumpus (lumpfish): 117749376
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Entry
117749376 CDS
T09199
Name
(RefSeq) glycine--tRNA ligase
KO
K01880
glycyl-tRNA synthetase [EC:
6.1.1.14
]
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
117749376
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
clum01007
]
117749376
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
clum03016
]
117749376
03029 Mitochondrial biogenesis [BR:
clum03029
]
117749376
Enzymes [BR:
clum01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.14 glycine---tRNA ligase
117749376
Amino acid related enzymes [BR:
clum01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
117749376
Transfer RNA biogenesis [BR:
clum03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
117749376
Mitochondrial biogenesis [BR:
clum03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
117749376
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HGTP_anticodon
tRNA-synt_2b
WHEP-TRS
Arg_repressor
DUF6778
Motif
Other DBs
NCBI-GeneID:
117749376
NCBI-ProteinID:
XP_034415726
Ensembl:
ENSCLMG00005020933
LinkDB
All DBs
Position
20:8421364..8427861
Genome browser
AA seq
676 aa
AA seq
DB search
MEELLAPLREAVREQGDLVHQLKEKGAKEQELSRAVAELKARKKILEAKELALQPKDDTV
DRVKMEDTLKRRFFYDQAFAIYGGVSGLYDFGPVGCALKNNILQVWRQHFIQEEQILEID
CTMLTPEPVLKTSGHVDKFADYMVKDAKTGECYRADHLLKADLKKLMSDEKCSAEKVHEM
EDVITQMDNYTQQELSDLFVKYNVKSPSTGNDLTPPVSFNLMFQTSIGPGGNTPGYLRPE
TAQGMFLNFKRLLEFNQGKLPFGAAQIGNSFRNEISPRSGLIRVREFTMAEIEHFVDPNE
KIHPKFSNVADLDLLLYSSKAQTSGQSAHIMRLGDAVEQGVINNSVLGYFIGRIYLYLIK
AGLSKDKVRFRQHMENEMAHYACDCWDAESKTSYGWIEIVGCADRSCYDLTCHSRATKVP
LVAEKPLKEPKVVNVVQFEPNKGAIGTAYKKDAKVVLEYLAACDEQYISDQEKLLNQKGE
FSIETQGRTFKLAKDMVSVKRFQKTLHVEEIVPNVIEPSFGIGRIMHSIFEHSFRIRQGD
EQRTYFSFPATVAPYKCSILPLSHNQEFTPFVHQLSEAMTKDGVSHKVDDSSGSIGRRYA
RSDEIGVAFGVTVDFDTVNKTPHTATLRDRDSMRQIRAEVNELPGMVRDLANGTLTWAEV
EKKYPVFEGQETMKKE
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atggaagaactactggcacctttaagggaggctgtgagggaacagggcgacttggtgcat
cagttgaaggaaaagggcgccaaagagcaggagctgagcagagctgttgcagagctgaaa
gcccggaagaagattcttgaagcaaaggagctggctttgcagcccaaagatgacacggtg
gacagagtgaagatggaggataccttaaagaggagattcttttacgatcaggcctttgct
atctatggaggtgtgagcggcctgtatgacttcggccctgtcggctgtgccctgaagaac
aacatcctgcaggtttggaggcagcacttcatccaggaggagcagatcctcgagatcgac
tgcaccatgctgacccctgagccggtcctcaagacgtcaggacatgtggataaatttgca
gactacatggtgaaagatgccaagaccggggagtgctaccgtgccgatcacctcctcaaa
gctgacttgaaaaaactaatgtctgatgagaaatgctctgcagagaaggtgcacgagatg
gaggacgtcatcactcagatggacaactacacccagcaggagctgtcggacctctttgtg
aaatacaacgtcaagtctccctccacaggaaatgacctcacacctcccgtctctttcaac
ctgatgtttcagacctccatcggtccaggggggaacacgcccggctatctgaggcctgaa
accgctcagggaatgttcctaaacttcaaacgcctgctggagttcaaccagggaaagctt
ccctttggcgccgctcagattgggaactccttcaggaacgagatctctcctcgctccgga
ctcattcgtgtcagagagttcaccatggctgagatcgagcactttgtggacccaaacgag
aagatccacccgaagttctccaacgtggccgacctggacctcctgttgtactcctccaag
gctcagaccagcggccagtctgcacacatcatgaggctgggcgatgctgtggagcaggga
gtgatcaacaattccgtgttgggttacttcattggaagaatctacctctatctaatcaaa
gcggggctgtctaaagataaagtgcgtttccgtcagcacatggaaaacgagatggctcac
tacgcatgcgactgctgggacgccgagtccaaaacctcctatggctggattgagatcgtg
ggctgtgctgaccgctcctgctatgacctcacgtgtcactccagagccaccaaggtgcct
ctcgtggctgaaaagcccctgaaagaacccaaagtggtgaacgtcgtccagtttgagccc
aataagggagccatcggaacggcctacaagaaagatgccaaagtggttctggagtacctg
gctgcctgtgacgaacaatacatcagtgatcaggagaagctgctcaatcaaaagggggag
ttcagcattgagacacaaggcagaacctttaaactggccaaagacatggtcagtgtgaaa
aggttccagaaaactctgcacgtggaggagattgttcccaatgtaatcgagccgtccttt
ggcatcggcagaatcatgcactccatctttgagcactcgttccgcatccggcagggggat
gagcagaggacgtatttcagcttccctgccaccgtagctccttacaaatgttccatcctt
cctctgagccacaaccaggagttcacaccatttgtccaccagttatccgaggcgatgact
aaagacggcgtgtcccacaaagtggacgactcctcaggatccatcgggcggcgttacgcc
cgctccgacgagatcggcgtggcgtttggcgtcaccgtcgacttcgacacggtgaacaag
acgcctcacacagccacgctgagagaccgcgactccatgaggcagatcagggccgaggtc
aatgagttgccggggatggttcgagatctggctaacggcaccttgacgtgggctgaggtg
gagaaaaagtacccggtctttgaaggacaagagaccatgaagaaagagtag
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