Cyclopterus lumpus (lumpfish): 117749377
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Entry
117749377 CDS
T09199
Name
(RefSeq) guanine nucleotide exchange factor VAV3 isoform X1
KO
K05730
guanine nucleotide exchange factor VAV
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04510
Focal adhesion
clum04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
117749377
09142 Cell motility
04810 Regulation of actin cytoskeleton
117749377
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
CAMSAP_CH
SH3_2
SH3_1
CH
SH2
SH3_9
SOS1_NGEF_PH
C1_1
PH
RHG20_PH
CDC24
SH2_1
ANC1_spectrin
C1_2
PH_10
KinB_sensor
Prok-RING_1
Motif
Other DBs
NCBI-GeneID:
117749377
NCBI-ProteinID:
XP_034415727
Ensembl:
ENSCLMG00005013405
LinkDB
All DBs
Position
20:13674546..13755717
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AA seq
861 aa
AA seq
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MMEYWRQCALWLINCKVLPANHRVTWESAQVFDLAQTLRDGVLLCHLLNNLRPQSINLKE
INLRPQMSQFLCLKNIRTFLAACSDVFGMKKSELFEAFDLFDVRDFGKVMDTLSKLSHTA
IAQQTGIRPYPSEESVEDEDIYNHLEDLIDENGVEDEEDLYDCVYDDEDGGEIYEDLMKT
EAVPPPAFQKQAETDIRSCCLTEIKQTEEKYTETLESIEKHFMTPLTMFLSMAEMEKVFV
NIPDLVKVHKCLLVEIQESVHHRSAHNLYQIFTTFKERLLIYGKYCSHVETAIAGLDDIC
KDREDVRMKLEECSKRANYGKFTLRDLLVVPMQRVLKYHLLLQELVKHTHDATDKSNLRT
ALDAMKDLAQYVNEVKRDNETMREIDQYQKSIENLNQPLSNYGRPKGDGEVRVTSVDKRA
KQDRHIFLFDAAVIVCKRRGDIYEMREVIDLHLFKITNNPTSDKENRKWSYGFYLTHNQG
QTGFEFFFKTKELKKKWLEQFGMAISNIRPENATNNLHEFNMHTFERITSCNSCHMLLRG
IFNQGYLCSKCGLGAHKECLARFGSCGKTGVCLGGVTCPSGEPMKETGGAKISDPGSVRT
QGKDRDAGRPKMLVIRNYFGVPSPASGPALSIQTGDIIEIICADLHSPWWQGKILATKDV
GFFPSDAVKPCPCVPKPVDYSSQAWFAGPMERLQAEAELINRVNSTYLVRHRSREYTEYA
ISIKYNNDVKHIKILTKDGCFYIAENKKFRSILELIEYYKHHSLREGFRSLDTTLKFPYQ
EPENAAMQRLNRSGSNMFTPKVIGVAIARYDFSSRDTRELSLQEGDVVKIYTKSGANGWW
RGEVNGRVGWFPSTYVEESEE
NT seq
2586 nt
NT seq
+upstream
nt +downstream
nt
atgatggagtactggaggcaatgcgcgctgtggctgatcaactgcaaggtgctgcccgct
aaccaccgagtgacatgggagtctgcgcaggtatttgacttggcccagaccctccgggat
ggagtcctcctctgccatctgctcaacaacctgcggccccagtccatcaacctgaaggaa
atcaacctccgaccgcagatgtcacagttcctgtgcctgaagaacatcaggacgttcctg
gcggcgtgcagcgacgtattcggcatgaagaaaagcgagctgttcgaggcctttgacctg
ttcgacgtcagggacttcggaaaggttatggacacactctctaaactttcccacacggcg
atcgcacaacaaactggaatcaggccctatccatctgaagagagtgtcgaagatgaggac
atctacaaccacctggaggaccttatagacgagaacggggtggaggatgaggaggatctg
tatgactgcgtgtatgacgacgaagatggaggggagatctacgaggacctgatgaagacg
gaagccgtccctcctccggcgttccagaagcaagcagagactgacatcaggagttgctgt
ttaacagagatcaagcagacagaggagaaatacacagagaccctggagtctatcgagaag
cactttatgacgcccctcaccatgtttctgtccatggccgagatggaaaaggtgtttgtg
aatatcccggacctggttaaagttcacaaatgtttactggtggaaatccaagaatcagtc
caccacagaagtgcccacaacctctaccagatcttcaccactttcaaagagaggttgctg
atctatgggaagtactgcagccatgtggaaacggccatcgccggtctggacgacatctgc
aaagacagggaggatgtacgcatgaagctcgaggaatgttcaaagagagctaactacggc
aagttcacactgagggatctgctcgtggttcctatgcagcgagtcttgaagtatcacctc
ctcctgcaggagctggtgaaacacactcacgatgccacagacaagagtaatctgcgaacg
gcgttggatgccatgaaggacttggctcagtacgtcaacgaagtcaagcgagacaatgag
acaatgcgagaaatagatcagtatcagaaatccatcgaaaacctgaatcagcctctgagt
aactacgggaggccaaaaggtgatggcgaggtacgggtgacctcggtggacaaacgagct
aaacaggacaggcacatcttcctgttcgatgccgccgtgatcgtttgtaagcggcgaggg
gacatctacgagatgagagaagtgatcgacctgcacctgttcaagatcactaacaacccc
acatccgacaaggagaatcggaagtggtcctacggattctacctcacccataaccagggc
cagaccggctttgaattcttcttcaagaccaaagagctgaaaaagaagtggctggagcag
tttggcatggccatatccaacattcgtccagagaacgcaactaacaacctccacgagttt
aatatgcacacctttgaaaggatcacctcctgcaactcttgccacatgctgctgaggggc
atctttaaccagggctacctgtgctccaagtgtggtttaggtgcccataaagaatgcctg
gcccgctttggcagctgtggaaaaacaggtgtgtgtcttgggggtgtaacctgtccctca
ggggagccaatgaaagaaaccggtggagcaaaaatctcagatcctggctccgtcagaact
cagggcaaagatcgagatgcaggtcggcccaagatgctggtaatcaggaactactttggt
gtgccgagcccagcgtctggtccagcgctcagcatccagacgggtgacatcatcgaaata
atctgcgccgaccttcacagcccctggtggcagggcaagatcctggccacgaaagacgtt
ggtttctttccaagcgacgccgtgaagccgtgcccatgtgttccaaagcccgtcgattac
tcctctcaagcctggtttgcggggcccatggagaggctgcaggcagaggcagagctcatc
aacagggtcaacagcacctacctggtccgccatcgcagcagagagtacacggagtacgcc
atcagtataaagtacaacaacgacgtgaagcacataaagatcctgacaaaggacggctgc
ttctacatcgcagagaacaagaagttcaggagcatattagaactgattgagtactacaag
caccactccttgagagaaggatttaggagtctggacaccacgctgaagtttccttaccag
gaaccggagaacgctgcgatgcagcgcctcaaccggtcggggagcaacatgttcactcca
aaagtgattggagtggcgatcgcgcggtacgacttcagctctcgagacacccgggagctc
tcgctgcaggagggtgacgtggtgaagatctacacgaagtcgggagccaacggctggtgg
aggggcgaggtcaacggcagggtcggctggttcccctccacatacgtagaggagagtgag
gagtga
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