Cyclopterus lumpus (lumpfish): 117749390
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Entry
117749390 CDS
T09199
Symbol
usp8
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 8
KO
K11839
ubiquitin carboxyl-terminal hydrolase 8 [EC:
3.4.19.12
]
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04137
Mitophagy - animal
clum04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
117749390 (usp8)
04137 Mitophagy - animal
117749390 (usp8)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
clum01002
]
117749390 (usp8)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
clum04131
]
117749390 (usp8)
04121 Ubiquitin system [BR:
clum04121
]
117749390 (usp8)
Enzymes [BR:
clum01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
117749390 (usp8)
Peptidases and inhibitors [BR:
clum01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
117749390 (usp8)
Membrane trafficking [BR:
clum04131
]
Endosome - Lysosome transport
Others
Others
117749390 (usp8)
Ubiquitin system [BR:
clum04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
117749390 (usp8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
USP8_dimer
WW_USP8
UCH_1
Motif
Other DBs
NCBI-GeneID:
117749390
NCBI-ProteinID:
XP_034415778
Ensembl:
ENSCLMG00005003315
LinkDB
All DBs
Position
3:complement(5649153..5659654)
Genome browser
AA seq
1077 aa
AA seq
DB search
MPAVSTGVKKLHLSTSLGELNKKAEIKPDKTGTRSYVQSACKIFKAAEEFRLDRDEERAY
VLYMKYLTVYDIIKKRPDFMQQPEYYMTMLGPNSFKKAIEEAEKLSESLKLRYEEVEVRK
RLEEKEIQEEKKRKEEITEKDGSRSSPKVSSANKKDSKKVKGELNEKKTELKNATSKAAV
PAGGISAERLFHMMKDQTITIIVMDARSHGDFEESRIQVPDQTCVSVPEEAISPGIIVSQ
IEAKLPEVSKEHWKRRGLVDYIVLLDWFSSVTDLTLGTTLQSLKDALYKWDSITVLRSVP
LVLEGGYENWLLFYPMYTTNAKVRPPRQNIISVTPQLNFSYPSLEEPKPPTPPQPEPEVT
PKPQEPSAPVLVNGFPPAEPPTSETSMVTDRLPDAIDSIVTGSTNSGKDLSLKGPATTKA
FPQFDRTKKPSVRVSSDPKPRKNGSAKDSLPNSPHVPDRSVKPSLIPNTSLSKEEQSQIH
SEAVAVMEKAKQEQEKRNQERLVEEEKRDQKERLEREQSEKRKKEDEENGPQEKKKLERQ
KAEEEEDKENRVWDGKERRGKEQNSDTPTKSMSLDSPAPNHIVNEIKREPLTRARSEEMG
RSVPGLPVGWMKFLDTVTGTYRYYHSPTNRVHLYPPEVTVPQTPPSTPPTVKQKPPQPAE
PDTSREQEQSKLKRSYSSPDISQDLREEVQKKADAATTVAAVTPTINRETKPPSKVYSKV
EIVRPTAAKIRNLNPSFGGLGASLTGLRNLGNTCYMNSILQCLCNTPAMAEYFNNNYYME
DINRYNILGHKGEVAEEFGVIMKALWAGLYKCISPRDFKITIGKINDQFAGCEQQDSQEL
LLFLMDGLHEDLNKADNRKRYKEEENDHMDDQAAADLAWSKHKLLNESIIVALFQGQFKS
TVQCLTCHRMSRTFETFMYLSLPLASTSKCSLQDCLRLFSKEEKLTDNNKVFCRHCKAHR
DSTKKLEIWKVPPIVLVHLKRFSYEGRWKQKLQTAVDFSLDTLDLTQYVIGPKQTVKKYC
LYGVSNHYGGLDGGHYTAYCKNALKQRWYKFDDHEVTDISTASVKSSAAYILFYSAL
NT seq
3234 nt
NT seq
+upstream
nt +downstream
nt
atgcctgcagtctccaccggggtcaaaaagctgcacctgtccacgtctctcggtgaactc
aataaaaaggccgaaattaagccagacaagacgggcaccagaagctatgttcaaagtgcc
tgtaaaatcttcaaggcggcagaggagtttcgcctggacagagatgaggagagggcttat
gtgctgtacatgaagtatttaacagtatatgacattatcaagaaaagaccagacttcatg
cagcaaccggagtattacatgaccatgctggggccaaacagctttaagaaagccatcgaa
gaagcagagaagctctctgaaagccttaaactcaggtatgaggaagttgaggttcgaaaa
agacttgaggagaaggagatacaagaggagaagaaaaggaaggaggaaataacagagaaa
gatggcagtcgaagctctccaaaagtgtcatcagcaaacaagaaggacagcaaaaaggta
aaaggagaactgaatgaaaagaagactgaactcaagaatgcaacctcaaaagctgcggtc
ccagctggtgggatttcagctgagaggcttttccacatgatgaaggaccagacgataaca
ataattgtcatggatgcccgcagccacggggactttgaggagtctcgcattcaggtccca
gaccagacctgtgtcagtgtgcctgaggaggccattagcccgggaatcattgtgagtcag
attgaggcaaagctgccggaggtgtccaaagagcattggaaaaggcgcggacttgtggat
tatatcgtcctactggactggttcagttctgtcactgaccttacacttggcaccaccttg
cagagcctcaaagatgccctctacaagtgggacagcatcaccgtcctgcgcagtgtgccg
ctggtgctggagggaggctacgagaactggctgttgttttacccaatgtacacaaccaac
gctaaagtacgcccccctagacagaatatcatcagcgtcacccctcagttgaactttagc
tacccatccctcgaggaaccaaagcctccgaccccacctcaaccagagcctgaggttaca
cccaagcctcaggaaccttcagctcctgtgctggtgaacgggtttccaccagcagaacct
ccaacatcggaaacttctatggttaccgacaggctgccagatgctatcgattcaatcgtc
acaggctccacaaattctgggaaagaccttagtctgaagggccctgcaacaaccaaggcc
ttcccccagtttgaccgtaccaagaaaccctctgtccgggtgtcgagcgatccgaagccc
agaaagaacggatcagcaaaggactccctgccgaacagcccacatgttcctgaccgctcg
gtcaaaccatcgcttatccccaacacttctttgtctaaagaagaacaaagccagatccac
tctgaggcagtggcagtgatggagaaggcaaagcaagagcaggagaaacgcaaccaggag
cgtctggtagaggaagagaaacgggaccagaaggaaaggctagaaagggagcaaagtgaa
aagaggaagaaggaagatgaggagaatggacctcaggagaaaaagaaactggaaaggcag
aaggcagaggaagaggaagataaagagaatagagtgtgggacgggaaagagaggaggggt
aaggagcagaactctgacactcccacaaagagtatgtctttggactctcctgctcccaac
catattgttaatgaaattaagagggagcccctgacccgagcaaggagtgaggagatgggt
cggagtgtaccaggccttccagtcggttggatgaagttccttgacacggtgacaggaacc
taccgatactaccattccccaaccaaccgtgtccacctgtaccctccggaggtcactgtt
ccccagaccccaccctccacgccgcccacagtcaaacagaaaccaccgcaaccagctgag
ccagacaccagccgggaacaggaacagtctaaactgaaacgctcctactcctcccctgat
attagccaggacttgagagaggaagtccagaagaaggctgacgccgcgacgaccgttgct
gccgtcacccccaccatcaacagagagacaaaaccgcctagtaaagtctactctaaagtg
gagattgtacggccaacagctgccaaaattcgcaacctgaatccttcatttggtggtctg
ggtgcatcgctgactggccttcgtaacctgggcaacacgtgctacatgaactccatcttg
cagtgtctgtgtaacactccggccatggctgagtacttcaacaacaattactacatggag
gacatcaacaggtacaacatactgggccacaaaggggaggtggcggaggagtttggtgtg
atcatgaaggccctgtgggctggtctgtacaagtgcatcagtccgcgggacttcaagatc
accatcggcaagatcaatgaccagtttgctggctgtgagcagcaagactcccaggagctg
ctgctgttcctgatggacgggctccatgaggacctcaacaaggcggacaacaggaagcgg
tacaaagaggaggaaaacgaccatatggatgatcaggcggcagccgacttggcctggagc
aaacacaagctgctcaatgagtccatcattgttgcgctgttccaggggcagttcaagtcc
actgtgcagtgtctgacctgccaccgcatgtcccggacatttgagaccttcatgtacctg
tcgctgcctctggcctccaccagcaagtgctccctgcaggattgtctgaggttgttctct
aaggaagagaagctgaccgacaacaacaaggtgttctgcaggcactgcaaggcccaccga
gattccaccaagaaactggagatctggaaggtcccacccattgtcctggtgcacttaaaa
cggttctcctacgagggccgatggaagcagaagctgcagactgccgtagacttctcgctc
gacactctggacctgacccagtacgtcattggcccaaaacagacggtgaagaaatactgc
ctttatggagtttctaaccactacgggggcttagacggggggcactacaccgcctactgc
aagaacgccctcaaacagcgctggtacaagttcgacgaccacgaggtgaccgacatctcc
accgcctccgtcaagtcctccgcagcctacatcctgttttactccgccctgtga
DBGET
integrated database retrieval system
