Cyclopterus lumpus (lumpfish): 117749423
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Entry
117749423 CDS
T09199
Symbol
cylda
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase CYLD isoform X1
KO
K08601
ubiquitin carboxyl-terminal hydrolase CYLD [EC:
3.4.19.12
]
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04217
Necroptosis
clum04622
RIG-I-like receptor signaling pathway
clum04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
117749423 (cylda)
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
117749423 (cylda)
04625 C-type lectin receptor signaling pathway
117749423 (cylda)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
clum01002
]
117749423 (cylda)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
clum04121
]
117749423 (cylda)
Enzymes [BR:
clum01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
117749423 (cylda)
Peptidases and inhibitors [BR:
clum01002
]
Cysteine peptidases
Family C67
117749423 (cylda)
Ubiquitin system [BR:
clum04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
117749423 (cylda)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CYLD_phos_site
CAP_GLY
UCH
Motif
Other DBs
NCBI-GeneID:
117749423
NCBI-ProteinID:
XP_034415845
Ensembl:
ENSCLMG00005018569
LinkDB
All DBs
Position
3:complement(22973079..22991888)
Genome browser
AA seq
956 aa
AA seq
DB search
MSSALWSQEKPSGGYREDWRFYMVIKECTVEKPPQKTLRIPRGSLGQACQERNSLGRTLP
PCKGKKSLRILDQTNVVLSLDERDVLELDEKLAELLFPITNCEERYALLCNKSRLERVRD
IDCGSKVRVQLRSGDEPLPGVVRFKGPLLPDRALSGIWFGVELLEEGRGQGFTEGSYQGR
QLFRCEDECGVFVALDKLELWEDDDDEALGELEVDHVNLVEEDQDFPPLEINSRVLVQTR
DGPERGTIIFCDLLPGNESLGYYVGVDMDNPIGDWDGMFDGKLLCNFASLEHTRLVPICD
VMPEYSMQDQRLQKHSFAPRGTNSDKTSSGQSKPKSKGLGHQCGSRSKSEFYYTLNGSTV
DPPTQSKSKSTWYIDEVGEDPAKSLTDTPPDFNQSSPPSRAPPSASLSSDNKFHSLPFSL
NRKTGPIDNMSHGPLSLSVQSVMGEQPEPPSPVAPPSPHPSTPPRGQPGLEVGSLVEVKE
NPPLCGVIRWVGLPPGLLEPLAGLELEEECPGCTDGTFKGTRYFTCPPKKALFVKLKCCR
PDSRFPSLHHSSNPIERCNSIAFGGYLSEVVHENTPPRTENDGLDVMVGKKKGIQGHYNS
CYLDSTLFCLFSFSSVLDTVLLRPRSKTDVEYYRETQELLRTEIVNPLRIHGYVCATKVM
KLRRILEKVEAASGFTSEEKDPEEFLNILFHHILRVDPLLKLRSAGQKVQDCYFYQIFMD
KKDKVGVPTIQQLLEWSFINSDLKFAEAPSCLIIQMPRFGKDFKMFNKIFPSLELDITDL
LEDTPRECRICGGLALYECRDCYEDGDITAGKIKQFCEKCNTQVHLHPRRKAHRHGKLSV
PKELQDGTGRQGSFPRQRMELFAVLCIETSHYVAFVKYGSADSAWLFFDSMADRDGGQNG
FNIPQVSPCPEVEAYLKMTPEELHTLDPKSIQGQARRLLCDAYMCMYQSSTMSLYK
NT seq
2871 nt
NT seq
+upstream
nt +downstream
nt
atgagctctgccctgtggagccaggagaagcccagtgggggctacagggaggactggcgc
ttctacatggtcataaaggagtgtacggtggagaagcctccccagaagaccctgaggatc
ccccgtggcagtcttggtcaggcctgccaggagcgcaacagcctggggagaacactgccc
ccatgcaagggcaaaaaaagtctccgcatcctggaccagaccaacgtggtgctgagcctg
gacgagcgggacgtcttggagctggacgagaagctggctgagctgctgttccccatcact
aactgtgaggagcggtatgccctcctctgcaacaagtcaaggctagagcgggtccgcgat
attgactgtggttcgaaggtgcgcgtccagctgcgctcaggggatgaacctctgcctggt
gtggttcgcttcaagggcccgctgctccctgacagagccctctctggaatctggtttgga
gtggagctgctggaggagggccggggccagggcttcacggagggctcctaccagggccga
caactcttccgctgtgaggatgagtgtggtgtgtttgtggctctggacaagctcgaactc
tgggaggatgatgatgacgaagccttgggtgagctagaggtggaccacgtcaatctggtg
gaagaggaccaggacttccctccactggagatcaactccagggtcctggtgcagaccagg
gacgggccagagagaggcaccatcatcttttgtgacctgctgccgggcaatgagagcctg
ggctactatgtgggagttgacatggacaatcctatcggggactgggatggtatgtttgac
gggaagttgctgtgtaattttgccagtttggagcacactcgactcgtccccatctgtgac
gtaatgccagaatattccatgcaggaccaacggctgcaaaagcacagttttgcccccaga
ggcaccaacagtgacaaaacgtcctctggccaaagcaaaccaaagagcaaaggattaggt
catcagtgtggcagtagaagcaagtctgaattttactatactttaaatggcagcactgtt
gatccccccacccagtccaaatccaaaagcacatggtacattgatgaagttggggaggac
cccgccaagtcacttactgacacgccccctgacttcaaccagtcctccccgccctccaga
gccccgccttctgcctcactgtccagtgacaacaagttccactctctgcccttcagcctg
aacaggaagaccgggcccattgacaacatgagccatgggcctctctccctttccgtccag
tcggtgatgggggagcagcccgagcccccgtcacctgttgcccctccctcaccgcatccg
tcgacgcctccccgaggacagcccggtctggaggtgggctctctggtggaggtgaaggag
aacccccctctgtgtggtgtcatccggtgggtgggccttcctcctggcctgctggagcct
ttggctgggctagagctggaggaagagtgccccggttgcactgacggcacctttaaaggt
acgcggtacttcacctgcccccccaaaaaggccctgttcgttaagctcaagtgctgccgg
cccgactcccgcttcccgtcgctgcatcactcctccaaccccatcgagcggtgcaactcc
atcgcatttggagggtatttaagtgaggtagtacacgagaacactcctccccgcacagag
aatgatggtctggatgtcatggtaggaaaaaagaaaggcatccagggccactacaactcc
tgctacctggattctaccctcttctgtctgttctccttcagctctgtactggacacggtt
ctgctgagacctcgctcaaagacagatgtggagtattacagagagacccaagagctgtta
cgcacagagatagtcaaccccctgcgcatacacgggtacgtctgtgctactaaagtgatg
aagctgaggaggatcctggagaaagtagaggctgcctctgggtttacatctgaagaaaaa
gatcctgaggagttccttaatatcctcttccatcacatactgagggtggatccgttgctg
aagctaaggtcagcaggacagaaggtccaggactgttacttctaccagatcttcatggac
aagaaggacaaggtgggagttcccaccatccagcagctcctggagtggtctttcatcaac
agcgacctcaagtttgcggaggctccctcctgccttatcatccagatgccccgctttggc
aaggacttcaaaatgttcaacaagattttcccctcattagagttagacatcacagacctt
cttgaagacactccaagggaatgtcgtatatgcggaggcctggctctctacgagtgtcga
gactgttatgaggacggggatatcacggcgggcaagattaaacagttctgtgaaaagtgc
aatacgcaggtccacctccacccgaggaggaaagcccatcggcacggcaaactgtccgtc
cccaaggagctgcaagacggtacggggcggcagggcagtttcccccgccagaggatggag
ctgtttgccgtgctgtgcatcgaaaccagtcactacgtggccttcgtgaagtacggcagc
gcggattccgcctggctcttcttcgacagcatggctgatcgcgatggagggcagaacggt
ttcaacatcccccaggtgtccccctgtccggaggtggaggcctacctgaaaatgaccccg
gaggagctgcacaccctggatcccaagagcatccagggccaggcccgacgcctgctgtgt
gatgcgtacatgtgcatgtaccagagctcgaccatgagcctgtacaagtag
DBGET
integrated database retrieval system
