Cyclopterus lumpus (lumpfish): 117749428
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Entry
117749428 CDS
T09199
Symbol
tfr1b
Name
(RefSeq) transferrin receptor 1b
KO
K06503
transferrin receptor
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum03273
Virion - Lassa virus and SFTS virus
clum04144
Endocytosis
clum04145
Phagosome
clum04216
Ferroptosis
clum04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
117749428 (tfr1b)
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
117749428 (tfr1b)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
117749428 (tfr1b)
04145 Phagosome
117749428 (tfr1b)
09143 Cell growth and death
04216 Ferroptosis
117749428 (tfr1b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
clum01002
]
117749428 (tfr1b)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
clum04147
]
117749428 (tfr1b)
04090 CD molecules [BR:
clum04090
]
117749428 (tfr1b)
Peptidases and inhibitors [BR:
clum01002
]
Metallo peptidases
Family M28: aminopeptidase Y family
117749428 (tfr1b)
Exosome [BR:
clum04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
117749428 (tfr1b)
Exosomal proteins of colorectal cancer cells
117749428 (tfr1b)
CD molecules [BR:
clum04090
]
Proteins
117749428 (tfr1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M28
PA
TFR_dimer
Motif
Other DBs
NCBI-GeneID:
117749428
NCBI-ProteinID:
XP_034415847
Ensembl:
ENSCLMG00005011286
UniProt:
A0A8C2Z6F3
LinkDB
All DBs
Position
20:complement(2021419..2033750)
Genome browser
AA seq
761 aa
AA seq
DB search
MDRVRSAFNRMIKSERYSRFTLQPAEDGERHIEVKLSEDTTEVGDSAGGSPSFRPAPRRQ
PRTTVCYLALGTLLIFVTGYVLGYISHRESEAEKVNCGEVPETSGRPLETPAAMDTAMDA
QMDAQMDWDDVAQLLTQKLTSQAFAKTLSDFDSPRRLAGSAEDVRLANRISDAFKDADMN
PWTDVHYVQLQRPDSVRPNRVLFGSDVFKPAGYLAYSANRTVQGKLVYGNYGRPEDLDVL
QNNDVGLSGAVLLLRAGKISFAEQVENVASKGAAAVLIYPDSQDYDYVADTALYGHVHLG
SGDPYTPGFPSLNHTQFPPTRSSGLPKIPAQTITATMASALLHNISGPEPAAASGFKGGL
ASVSYSLGGVGNVTVEVNNVLVNTEIHNVFGVIKGFTDPDRYVVLGAQRDAWGKGYAKAT
VGTSVLVELARAVHQMVEKDGFRPRRSLVFASWSAGEYGSVGATEWLESYMSSIDKRVVS
YISLDGVVMGRGSFMASASPLLYSLLENTMKEVKSPVGSGSVFEMVGTKYWNAQMLKPMS
LDDPAYPFLAFSGIPSVSFHFISPNTEAYPYYGTDLDSMDHLAYQTNHRTDEMAVAAAQF
AGRVALRLVHDHLLRLDVSRYGDVVTGAVIRVYRRVQQLIKSGQLKDVNANWLNRARGAF
QRAARRVNNDVRNTDLTDEAACRILNDRIMTVEHTLLSPYVSPLETPFRHLLLGRGAQTL
GSVAETTDMEQLHTQLALATWTLQGCANAMVGNIWDIDEEI
NT seq
2286 nt
NT seq
+upstream
nt +downstream
nt
atggatcgagtgaggtctgcatttaacaggatgattaaaagtgagcgctacagcaggttc
actctgcagccggccgaagacggggagaggcacattgaggtcaaactgtcggaggacacc
accgaggtcggggactcggcagggggatccccgagcttcagaccggcacctcgacgtcaa
ccacgaactaccgtctgctacctggccctggggaccctgctgatatttgtcaccggctac
gtgctcggttacatcagccaccgggaatcagaggcggagaaagtgaactgtggcgaagtg
ccggaaacgtccggccggccgctagagacgccggccgcgatggacaccgcgatggacgct
cagatggacgctcagatggactgggacgacgtcgcccaactcctcacgcagaaactcacc
agccaggccttcgccaaaactctgagcgatttcgattcgccgagacgtttggcaggaagt
gccgaagacgtccgcctggcgaaccgcatctctgatgccttcaaggacgcggacatgaac
ccctggaccgacgtccactacgtgcagctgcagaggcccgacagcgtgcgtccgaaccgc
gtcctgtttggttccgacgtcttcaagcctgcagggtacctggcctacagcgctaacagg
acggttcagggcaagctggtctacggcaactacggccggcccgaggacctggacgtcctg
cagaacaacgacgtcgggctgagcggcgccgtgctgctgctgcgagccggaaagatcagc
ttcgcggagcaggtggagaacgtcgcctcgaagggcgccgccgctgttctgatctacccc
gacagtcaggactacgactacgtggcggacacggcgctctacggacacgtgcacctgggt
tcaggagacccctacacacctggattcccctccttgaaccacacgcagttccccccgacg
aggtcctccggtctccccaaaatcccggcccagaccatcacggccaccatggcttcagct
cttctgcataacatcagtggtcctgagccggccgccgccagcggttttaaaggcggcctg
gcgtcggtgtcttactccctgggaggcgtggggaacgtcaccgtggaggtgaacaacgtt
ctggtgaacacggagatccacaacgtgttcggggtcatcaaaggattcaccgaccctgac
cgctacgtcgtactgggagctcagagagacgcctggggcaaaggttacgccaaggccacc
gtgggcacctccgtactggtggagctggccagggcggttcaccagatggtggagaaagac
gggttcaggcccaggagaagcctggtgttcgccagctggagcgcgggagagtacggcagt
gttggcgccaccgagtggctggagagttatatgtcctccatcgacaagcgtgtcgtcagc
tacatcagcctggacggcgtggtcatgggtcgtgggagcttcatggcgtcggcgagcccg
ctgctctacagcctccttgagaacacgatgaaagaggtgaagagccccgtcgggtccggc
tcggtgttcgagatggtgggaacgaagtactggaacgcccaaatgctgaagccgatgtcc
ctcgacgaccccgcgtatccctttctggccttctctggaatcccctccgtttctttccac
ttcatctctccgaataccgaggcctacccgtactacggcaccgacctggacagcatggat
cacctggcttaccaaaccaaccatcgcaccgacgagatggcggtggcggcggcccagttc
gccggccgcgtggcgctgcggctcgtccacgaccacctgctgcgcctggacgtgagccgg
tacggcgacgtggtcaccggggccgtgatccgggtctacaggcgcgtgcagcagctcatc
aagtcggggcagctgaaggacgtgaacgccaactggctgaaccgcgcacgcggcgccttc
cagcgcgccgccagacgcgtcaacaacgacgtccggaacaccgacttgaccgacgaggcc
gcctgtcggatcctcaacgaccgcatcatgacggtggagcacaccctcctctctccgtac
gtgtcccccctcgagacccccttccgccacctcctgctgggtcgcggcgcccagactctg
ggatccgtcgccgagaccaccgacatggagcagctgcacacgcagctggcgctggccacc
tggaccctgcagggctgcgccaacgccatggtgggcaacatctgggacatcgacgaggag
atctag
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